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The map label for this gene is 116623251

Identifier: 116623251

GI number: 116623251

Start: 5274776

End: 5275690

Strand: Reverse

Name: 116623251

Synonym: Acid_4158

Alternate gene names: NA

Gene position: 5275690-5274776 (Counterclockwise)

Preceding gene: 116623252

Following gene: 116623250

Centisome position: 52.94

GC content: 67.32

Gene sequence:

>915_bases
ATGCTGGAAGCGATGACGGCGGCGATCTTTGTGCTGGTGGCGGGCGGCACGGCGTGGGCCGCGCTGCGAGCGGGCTCATG
GCGGGTTCGCGGGGTCACGCGGCTGGCTCCGGCGGCGGGAACTGCGCGGGTGCGGGTTTCGCCGGGCGCTCTGTGGGGGC
GGCTGGTCAGCCGCATCGGGACGGCGCTGCCGACGCCTGCGCGCGAGCTGCCCCGGTTGAAGCGCCAACTGGTCCGCGCG
GGTTTCCGCGGACCGGGCGCGGCGCGGCACTTCCAGGGCATACGGCTGGTAGCGACGCTGGGCTGCGGGGCGGGAGCGCT
GCTGGGTGCGTCGCAGTGGCATGCCGCGTCCGACAATGTCTTCTGGAGCGCGGCGGCGGGAATCGCATTCGGTTACCTGG
CACCCATGCAGTATGTACAGTTCTGTGTGGGGCGGCGTCGGAAGGCGATCGAGCGCGGCCTGCCGAATACCCTGGACCTG
ATGGTGGTTTGTGTGGAATCGGGGCTGGGGATCGACCAGACCACGCTCCAGGTGGCCAAGGAACTGCACTGGGCGCATCC
GGAAATCTGCGCCGAATTCACCGTGATGAACCTGGAATTGCGCGCCGGGATCAGGCGGGCGGAAGCGCTGCATAACCTGG
CGGAGCGCACCGGCGTGGACGATGTGAAGAAGCTGGTGGCAGTGCTGGTGCAGACGGACCGCTTCGGAACCAGCATCGCG
CAGAGCCTGCGCGGCCATGCGGAGTACCTGCGAACCATGGCGCGGCAGCGGGCGGAAGAGCGTGCGTCGAAGCTGGCGGT
GAAGCTGGTGTTCCCGATATTCTTCTGCGTGCTGCCCTCCTTATTCGTGGTGACGATCGGGCCGGTGATCACGCGGCTGG
TTCGCGAATTGATCCCGATGATTGAAAATATGTAA

Upstream 100 bases:

>100_bases
GGCGGCGGGCCTGGGCTTGCAACTCCTGGGATACCTGATCATCAGAAAGATCGTGACGTTCGACGTTTAGATATCAAGGT
GTAGGTGTCGAGGTGTAGGC

Downstream 100 bases:

>100_bases
TGCCTTCGCTAACTGGGCCGATAAGTCAAGGGAAGGAGACTTATTTATGGACTCAGGCACATTGCGAATGATTTGCGGGA
TTATGGCCGTATTGTTCGGA

Product: type II secretion system protein

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadC; Type II Secretion System F Domain Protein; Type II/IV Secretion System Protein TadC Subfamily; Type II Secretion System F Domain-Containing Protein; Flp Pilus Assembly Protein; TadC Protein; Integral Membrane Protein; Tad Secretion System Secretion Accessory Protein; Type II Secretion System Protein F; Type II Secretion System F Domain; Bacterial Type II Secretion System Protein F Domain; Pilus Assembly Protein; Tight Adherence TadC-Like Transmembrane Protein; Pilus Component Protein; Type II Secretion System; TadC Pilus Assembly Protein; TadC Family Type II/IV Secretion System Protein; TadC Component Of Type IV Pilus; Type II Secretion System Protein F Domain; Type II Secretion System Protein F Domain Protein; Tight Adherence TadC-Related Transmembrane Protein; Secretion System Protein TadC; Tyrosine Phenol-Lyase; Fimbriae-Related Membrane Protein; Pilus Assembly Protein TadC; Putative Tight Adherence TadC-Like Transmembrane Protein; TadC Subunit; Components Of Type IV Pilus TadC; Pilus Assemble Protein; Component Of Type IV Pilus; Von Willebrand Factor Type A; Type II Secretion System Integral Membrane Subunit; Component Of Pilus Protein; Components Of Type IV Pilus

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MLEAMTAAIFVLVAGGTAWAALRAGSWRVRGVTRLAPAAGTARVRVSPGALWGRLVSRIGTALPTPARELPRLKRQLVRA
GFRGPGAARHFQGIRLVATLGCGAGALLGASQWHAASDNVFWSAAAGIAFGYLAPMQYVQFCVGRRRKAIERGLPNTLDL
MVVCVESGLGIDQTTLQVAKELHWAHPEICAEFTVMNLELRAGIRRAEALHNLAERTGVDDVKKLVAVLVQTDRFGTSIA
QSLRGHAEYLRTMARQRAEERASKLAVKLVFPIFFCVLPSLFVVTIGPVITRLVRELIPMIENM

Sequences:

>Translated_304_residues
MLEAMTAAIFVLVAGGTAWAALRAGSWRVRGVTRLAPAAGTARVRVSPGALWGRLVSRIGTALPTPARELPRLKRQLVRA
GFRGPGAARHFQGIRLVATLGCGAGALLGASQWHAASDNVFWSAAAGIAFGYLAPMQYVQFCVGRRRKAIERGLPNTLDL
MVVCVESGLGIDQTTLQVAKELHWAHPEICAEFTVMNLELRAGIRRAEALHNLAERTGVDDVKKLVAVLVQTDRFGTSIA
QSLRGHAEYLRTMARQRAEERASKLAVKLVFPIFFCVLPSLFVVTIGPVITRLVRELIPMIENM
>Mature_304_residues
MLEAMTAAIFVLVAGGTAWAALRAGSWRVRGVTRLAPAAGTARVRVSPGALWGRLVSRIGTALPTPARELPRLKRQLVRA
GFRGPGAARHFQGIRLVATLGCGAGALLGASQWHAASDNVFWSAAAGIAFGYLAPMQYVQFCVGRRRKAIERGLPNTLDL
MVVCVESGLGIDQTTLQVAKELHWAHPEICAEFTVMNLELRAGIRRAEALHNLAERTGVDDVKKLVAVLVQTDRFGTSIA
QSLRGHAEYLRTMARQRAEERASKLAVKLVFPIFFCVLPSLFVVTIGPVITRLVRELIPMIENM

Specific function: Unknown

COG id: COG2064

COG function: function code NU; Flp pilus assembly protein TadC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33024; Mature: 33024

Theoretical pI: Translated: 11.44; Mature: 11.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEAMTAAIFVLVAGGTAWAALRAGSWRVRGVTRLAPAAGTARVRVSPGALWGRLVSRIG
CCHHHHHHHHHHHCCCHHHHHHHCCCEEECCHHHHCCCCCCEEEEECCHHHHHHHHHHHH
TALPTPARELPRLKRQLVRAGFRGPGAARHFQGIRLVATLGCGAGALLGASQWHAASDNV
CCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHCCCCHHHHCCCCCCCCCCCC
FWSAAAGIAFGYLAPMQYVQFCVGRRRKAIERGLPNTLDLMVVCVESGLGIDQTTLQVAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHH
ELHWAHPEICAEFTVMNLELRAGIRRAEALHNLAERTGVDDVKKLVAVLVQTDRFGTSIA
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHH
QSLRGHAEYLRTMARQRAEERASKLAVKLVFPIFFCVLPSLFVVTIGPVITRLVRELIPM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IENM
HHCC
>Mature Secondary Structure
MLEAMTAAIFVLVAGGTAWAALRAGSWRVRGVTRLAPAAGTARVRVSPGALWGRLVSRIG
CCHHHHHHHHHHHCCCHHHHHHHCCCEEECCHHHHCCCCCCEEEEECCHHHHHHHHHHHH
TALPTPARELPRLKRQLVRAGFRGPGAARHFQGIRLVATLGCGAGALLGASQWHAASDNV
CCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHCCCCHHHHCCCCCCCCCCCC
FWSAAAGIAFGYLAPMQYVQFCVGRRRKAIERGLPNTLDLMVVCVESGLGIDQTTLQVAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHH
ELHWAHPEICAEFTVMNLELRAGIRRAEALHNLAERTGVDDVKKLVAVLVQTDRFGTSIA
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHH
QSLRGHAEYLRTMARQRAEERASKLAVKLVFPIFFCVLPSLFVVTIGPVITRLVRELIPM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IENM
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA