| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116623180
Identifier: 116623180
GI number: 116623180
Start: 5195271
End: 5195804
Strand: Direct
Name: 116623180
Synonym: Acid_4087
Alternate gene names: NA
Gene position: 5195271-5195804 (Clockwise)
Preceding gene: 116623179
Following gene: 116623181
Centisome position: 52.13
GC content: 54.31
Gene sequence:
>534_bases ATGAAAATTGGAATCTGTGTGCTGGCAATGACGGCACTGGCTGGGACCATTCCTGGCGCCGAAGTGCAGTATTGGATCGC GCCGTGCGCGAATTCTGCAGAAACAGGTTGCAAGAGCGGAGATGCGGAGCTGGCGCAGTGGGCGATGGAGGCGTGGCAGG CGGCGTCCGAGGGTAAGTTGAAAGTATCGCGAATATCGGATAAAGAACGGGCGGCAATTCGAATCTACTGGGCTACGGGG CGAGACGGCTTATATGGGGAAACACGCGGGGGAGATGTGTATGTTCGCCCCGATCCGGGACAGGGATTGACACGGGAGGC GGTAACCTACCTGACCTGTGTTCATGAGACGGGGCATGCGTTGGGATTGGCGCACACTGCAAACTTTGACGACATAATGT ACAACTTTCAATACGGTGGAGATATCTCGGAATATTTTGGACGGTACGTACGCAAGTTAGAGCGGCGGGAAGATATCCGG CGGTACTCAGGTATTTCCCCTAATGATCGAAAAAGATTAGCTGCCGGACTGTAA
Upstream 100 bases:
>100_bases GTGGTGGCGGTTGGGATTCCTGATATCCGTGGTAAATCTGGTGATCTGGCTGGGGATCGGGTCGCTGTGGTGGAAGCTGG TGGGGATCTGGTAAGAGTCT
Downstream 100 bases:
>100_bases GCCGGTTCCTGTACCCTTGCGGGCGGTAGTCATTCCTCTGGACCGGCCATTACTGACCGGTTCTAGCGACCTACCCGGAA GTCAAGCGGGACGGGCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MKIGICVLAMTALAGTIPGAEVQYWIAPCANSAETGCKSGDAELAQWAMEAWQAASEGKLKVSRISDKERAAIRIYWATG RDGLYGETRGGDVYVRPDPGQGLTREAVTYLTCVHETGHALGLAHTANFDDIMYNFQYGGDISEYFGRYVRKLERREDIR RYSGISPNDRKRLAAGL
Sequences:
>Translated_177_residues MKIGICVLAMTALAGTIPGAEVQYWIAPCANSAETGCKSGDAELAQWAMEAWQAASEGKLKVSRISDKERAAIRIYWATG RDGLYGETRGGDVYVRPDPGQGLTREAVTYLTCVHETGHALGLAHTANFDDIMYNFQYGGDISEYFGRYVRKLERREDIR RYSGISPNDRKRLAAGL >Mature_177_residues MKIGICVLAMTALAGTIPGAEVQYWIAPCANSAETGCKSGDAELAQWAMEAWQAASEGKLKVSRISDKERAAIRIYWATG RDGLYGETRGGDVYVRPDPGQGLTREAVTYLTCVHETGHALGLAHTANFDDIMYNFQYGGDISEYFGRYVRKLERREDIR RYSGISPNDRKRLAAGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19516; Mature: 19516
Theoretical pI: Translated: 7.38; Mature: 7.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIGICVLAMTALAGTIPGAEVQYWIAPCANSAETGCKSGDAELAQWAMEAWQAASEGKL CCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCE KVSRISDKERAAIRIYWATGRDGLYGETRGGDVYVRPDPGQGLTREAVTYLTCVHETGHA EEEECCCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCE LGLAHTANFDDIMYNFQYGGDISEYFGRYVRKLERREDIRRYSGISPNDRKRLAAGL EEEEECCCHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCC >Mature Secondary Structure MKIGICVLAMTALAGTIPGAEVQYWIAPCANSAETGCKSGDAELAQWAMEAWQAASEGKL CCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCE KVSRISDKERAAIRIYWATGRDGLYGETRGGDVYVRPDPGQGLTREAVTYLTCVHETGHA EEEECCCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCE LGLAHTANFDDIMYNFQYGGDISEYFGRYVRKLERREDIRRYSGISPNDRKRLAAGL EEEEECCCHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA