| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116622994
Identifier: 116622994
GI number: 116622994
Start: 4927869
End: 4929962
Strand: Direct
Name: 116622994
Synonym: Acid_3898
Alternate gene names: NA
Gene position: 4927869-4929962 (Clockwise)
Preceding gene: 116622993
Following gene: 116622995
Centisome position: 49.45
GC content: 62.61
Gene sequence:
>2094_bases ATGCCAAAACTAATCGCACTATTTCTTACCCTGGCCATCGCGTTCTCCCAAACCCAACCGTCCGACATGGTCATCCGCAT CAACGTCAACCTGGTCCAGGTGGACGCCGTCGTGGTCGATGGCAAGGATCAGCCTGTCACCGATCTCAAGAAAGAGGACT TCGTCATCCTTCAGGACGGTAAGCCTCAAGCCATCACCAACTTCAGCTTCATCAACGCGAACGAGGGCGTGGTCCGCGCC ACCTCCGCCAAGCCCGCAGCACCCGTGAAAGGCGTCCCGCCGCCGCCATCCCCGCCCATGGCCGCCAGGCCCAAACAGAT CCGCCGCACCGTGGCGCTCGTGGTGGATGATCTCGGTCTTTCCTTCGAAAGTATTGCCCGCGTCCGCCAGTCCCTCAAAA AGTACGTGGACCAGCAAATGCAGCCCAATGACCTTGTCGCCGTGATCCGCACCGGCGCCGGCATGGGATCTTTACAACAA TTTACCAGCGATAAGCGCATGCTCTACGCCGCCATCGACCACGTAAAATACAACGCTCTCGGCCGCGTCGGCATCAGCAG CTTCGCCCCCCTCGAACCCGCCGGCGGCATCGACACCTCCAACGCGGATAATGAGCGCGAACAGATCTTTTCCGCCGGTA CTATGGGCGCGATTCAATACGTCGTCGAAGGTCTCAAGGAGCTCCCCGGCCGCAAAAGCGTGGTCCTCTTCAGCGAAAAT CTCAAGCTCATGTACAACGGGGAACAGAGCCAGCGGGTCCAGGACAGCGTCCGCCGTCTCGGCGATGCCGCAAACCGCGC CTCCGTCGTCATCTACAGCATCGATCCCCGCGGCCTCGTCTACACCGGACTCACTGCCGCCGATAACACCAGCGGCCGCT CCCAGCAGCAAATCGCCAAACTCGGCATGCAGCGCTCCCAGGATATGTTCGATTCCCAGGAAGGCATGGTCACCCTCGCG CGCGAAACCGGCGGCCTCTTCATGCAGAACACCAACGACATCTCCGGCGCCCTCACCAAAGTCATGGCCGATGGCGATGG CTATTACTTAATCGGGTACCACCCCGATGCCGCGACCTTCGACGCCAAGACCGGCCGGCCCAAATTCCACAGCCTCGCTG TCCGCGTCAAACGCCCCGGCCTCCACGTCCGCTATCGCAGCGGCTTCTTCGGCACCAGCGACCGCGAGACCGCACCCGTG CCGCGCACCCGCAATGCCCAGATCGCGCATGCACTGGCCTCGCCGTTCGGCACCGGCGCGCTTCACCTGCGCCTCACCAG CCTCTTCTCCCACGCCGCGAAGAGCGGCCCCTATATCAATTCCCTGCTCTTCTTCGACCCCCGCCAGCTTCAGTTCACCG ACGAACCCGACGACTGGCACAAAGCTGTGATCGACGTCGTCTGCATGACCTTCGGCGATACCGGCCAATCCGTCGATACC ACCGACAAGACCTGGACCATCCGCCTCAAGGGCGATACCTATCGCAACGTGCTGTCCCAGGGAATGGTCTATTCCGTCCA CGTCGCCGTCAAGAAGCCCGGCGCCTACCAGATGCGCGTCGTGATGCGCGATGCCACCAGCGAATTAATCGGCTCCGCCA GCCAGTTCATCGACGTCCCCGATATCGATAAGGGCCGCCTCGCCCTCTCCGGCATTGTGCTCCGCGCCGAAGCTTCGCAG GCCAAGGCGCCCGCCGGCCCCGAACACCCCGAAGGCGAGCAGGCCACCGATATCGACCCGCAGGGCACCCCCGCCGTCCG CATCTTTAAGCCCGGCACGGCCATCACCTATGGCTACCAGATCCTCAACGCCCAGGCGGATAACGCCAGACAGCCGGAGC TCGAGGTCCAGACCCGCCTCTTCCGCGACGGCGAGCAAGTGTATGCCGGCAAACCCACCCCGCTCCCGGTTTCCGGACAG GAAGACCCCAAACGCCTGATCGGCGGCGGCCGCATGCAGCTGGGCGGCAAAATTACACCGGGCGATTACGTCCTCCAGGT CATCGTCACCGACAAATTGGCGAAAGAGAAATTCCGCGTCGCCACCCAGTCCATGGACTTCGAAATCAAGCCCCCGGCAG ATCCGGGGAAGTAG
Upstream 100 bases:
>100_bases CTTCCTCTGCGTCTCTGCGTCTCTGCGAGAACCGCCCCTCCGCAACTTTTCCCGCCCACCGGCAGTTATAGTTATTAGGG CTCCTTATCCCTAATTAGAA
Downstream 100 bases:
>100_bases GAGAGTCTCCTTTTCTCGCAAAGCCGCAAAGCCGCAAAGTAACGCCAAGAAGAAGAAACCAGGATTCCTTTTGTGCTGGG TTTTCTTTGCGTTACTTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 697; Mature: 696
Protein sequence:
>697_residues MPKLIALFLTLAIAFSQTQPSDMVIRINVNLVQVDAVVVDGKDQPVTDLKKEDFVILQDGKPQAITNFSFINANEGVVRA TSAKPAAPVKGVPPPPSPPMAARPKQIRRTVALVVDDLGLSFESIARVRQSLKKYVDQQMQPNDLVAVIRTGAGMGSLQQ FTSDKRMLYAAIDHVKYNALGRVGISSFAPLEPAGGIDTSNADNEREQIFSAGTMGAIQYVVEGLKELPGRKSVVLFSEN LKLMYNGEQSQRVQDSVRRLGDAANRASVVIYSIDPRGLVYTGLTAADNTSGRSQQQIAKLGMQRSQDMFDSQEGMVTLA RETGGLFMQNTNDISGALTKVMADGDGYYLIGYHPDAATFDAKTGRPKFHSLAVRVKRPGLHVRYRSGFFGTSDRETAPV PRTRNAQIAHALASPFGTGALHLRLTSLFSHAAKSGPYINSLLFFDPRQLQFTDEPDDWHKAVIDVVCMTFGDTGQSVDT TDKTWTIRLKGDTYRNVLSQGMVYSVHVAVKKPGAYQMRVVMRDATSELIGSASQFIDVPDIDKGRLALSGIVLRAEASQ AKAPAGPEHPEGEQATDIDPQGTPAVRIFKPGTAITYGYQILNAQADNARQPELEVQTRLFRDGEQVYAGKPTPLPVSGQ EDPKRLIGGGRMQLGGKITPGDYVLQVIVTDKLAKEKFRVATQSMDFEIKPPADPGK
Sequences:
>Translated_697_residues MPKLIALFLTLAIAFSQTQPSDMVIRINVNLVQVDAVVVDGKDQPVTDLKKEDFVILQDGKPQAITNFSFINANEGVVRA TSAKPAAPVKGVPPPPSPPMAARPKQIRRTVALVVDDLGLSFESIARVRQSLKKYVDQQMQPNDLVAVIRTGAGMGSLQQ FTSDKRMLYAAIDHVKYNALGRVGISSFAPLEPAGGIDTSNADNEREQIFSAGTMGAIQYVVEGLKELPGRKSVVLFSEN LKLMYNGEQSQRVQDSVRRLGDAANRASVVIYSIDPRGLVYTGLTAADNTSGRSQQQIAKLGMQRSQDMFDSQEGMVTLA RETGGLFMQNTNDISGALTKVMADGDGYYLIGYHPDAATFDAKTGRPKFHSLAVRVKRPGLHVRYRSGFFGTSDRETAPV PRTRNAQIAHALASPFGTGALHLRLTSLFSHAAKSGPYINSLLFFDPRQLQFTDEPDDWHKAVIDVVCMTFGDTGQSVDT TDKTWTIRLKGDTYRNVLSQGMVYSVHVAVKKPGAYQMRVVMRDATSELIGSASQFIDVPDIDKGRLALSGIVLRAEASQ AKAPAGPEHPEGEQATDIDPQGTPAVRIFKPGTAITYGYQILNAQADNARQPELEVQTRLFRDGEQVYAGKPTPLPVSGQ EDPKRLIGGGRMQLGGKITPGDYVLQVIVTDKLAKEKFRVATQSMDFEIKPPADPGK >Mature_696_residues PKLIALFLTLAIAFSQTQPSDMVIRINVNLVQVDAVVVDGKDQPVTDLKKEDFVILQDGKPQAITNFSFINANEGVVRAT SAKPAAPVKGVPPPPSPPMAARPKQIRRTVALVVDDLGLSFESIARVRQSLKKYVDQQMQPNDLVAVIRTGAGMGSLQQF TSDKRMLYAAIDHVKYNALGRVGISSFAPLEPAGGIDTSNADNEREQIFSAGTMGAIQYVVEGLKELPGRKSVVLFSENL KLMYNGEQSQRVQDSVRRLGDAANRASVVIYSIDPRGLVYTGLTAADNTSGRSQQQIAKLGMQRSQDMFDSQEGMVTLAR ETGGLFMQNTNDISGALTKVMADGDGYYLIGYHPDAATFDAKTGRPKFHSLAVRVKRPGLHVRYRSGFFGTSDRETAPVP RTRNAQIAHALASPFGTGALHLRLTSLFSHAAKSGPYINSLLFFDPRQLQFTDEPDDWHKAVIDVVCMTFGDTGQSVDTT DKTWTIRLKGDTYRNVLSQGMVYSVHVAVKKPGAYQMRVVMRDATSELIGSASQFIDVPDIDKGRLALSGIVLRAEASQA KAPAGPEHPEGEQATDIDPQGTPAVRIFKPGTAITYGYQILNAQADNARQPELEVQTRLFRDGEQVYAGKPTPLPVSGQE DPKRLIGGGRMQLGGKITPGDYVLQVIVTDKLAKEKFRVATQSMDFEIKPPADPGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75820; Mature: 75689
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKLIALFLTLAIAFSQTQPSDMVIRINVNLVQVDAVVVDGKDQPVTDLKKEDFVILQDG CCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCCCCCEEEEECC KPQAITNFSFINANEGVVRATSAKPAAPVKGVPPPPSPPMAARPKQIRRTVALVVDDLGL CCCEEEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC SFESIARVRQSLKKYVDQQMQPNDLVAVIRTGAGMGSLQQFTSDKRMLYAAIDHVKYNAL CHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHCCCCCEEEEHHHHHHHCCC GRVGISSFAPLEPAGGIDTSNADNEREQIFSAGTMGAIQYVVEGLKELPGRKSVVLFSEN CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECC LKLMYNGEQSQRVQDSVRRLGDAANRASVVIYSIDPRGLVYTGLTAADNTSGRSQQQIAK EEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEEECCCCCCCHHHHHHH LGMQRSQDMFDSQEGMVTLARETGGLFMQNTNDISGALTKVMADGDGYYLIGYHPDAATF HHHHHHHHHHCCCCCEEEEEECCCCEEEECCCCHHHHHHHHEECCCCEEEEEECCCCCEE DAKTGRPKFHSLAVRVKRPGLHVRYRSGFFGTSDRETAPVPRTRNAQIAHALASPFGTGA CCCCCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCE LHLRLTSLFSHAAKSGPYINSLLFFDPRQLQFTDEPDDWHKAVIDVVCMTFGDTGQSVDT EEEHHHHHHHHHHHCCCCEEEEEEECCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCC TDKTWTIRLKGDTYRNVLSQGMVYSVHVAVKKPGAYQMRVVMRDATSELIGSASQFIDVP CCCEEEEEECCCHHHHHHHCCCEEEEEEEEECCCCEEEEEEEHHHHHHHHCCHHHCCCCC DIDKGRLALSGIVLRAEASQAKAPAGPEHPEGEQATDIDPQGTPAVRIFKPGTAITYGYQ CCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEE ILNAQADNARQPELEVQTRLFRDGEQVYAGKPTPLPVSGQEDPKRLIGGGRMQLGGKITP EEECCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHCCCEEEECCEECC GDYVLQVIVTDKLAKEKFRVATQSMDFEIKPPADPGK HHHEEEEEEHHHHHHHHHHHHHHCCCEEECCCCCCCC >Mature Secondary Structure PKLIALFLTLAIAFSQTQPSDMVIRINVNLVQVDAVVVDGKDQPVTDLKKEDFVILQDG CHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCCCCCEEEEECC KPQAITNFSFINANEGVVRATSAKPAAPVKGVPPPPSPPMAARPKQIRRTVALVVDDLGL CCCEEEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC SFESIARVRQSLKKYVDQQMQPNDLVAVIRTGAGMGSLQQFTSDKRMLYAAIDHVKYNAL CHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHCCCCCEEEEHHHHHHHCCC GRVGISSFAPLEPAGGIDTSNADNEREQIFSAGTMGAIQYVVEGLKELPGRKSVVLFSEN CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECC LKLMYNGEQSQRVQDSVRRLGDAANRASVVIYSIDPRGLVYTGLTAADNTSGRSQQQIAK EEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEEECCCCCCCHHHHHHH LGMQRSQDMFDSQEGMVTLARETGGLFMQNTNDISGALTKVMADGDGYYLIGYHPDAATF HHHHHHHHHHCCCCCEEEEEECCCCEEEECCCCHHHHHHHHEECCCCEEEEEECCCCCEE DAKTGRPKFHSLAVRVKRPGLHVRYRSGFFGTSDRETAPVPRTRNAQIAHALASPFGTGA CCCCCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCE LHLRLTSLFSHAAKSGPYINSLLFFDPRQLQFTDEPDDWHKAVIDVVCMTFGDTGQSVDT EEEHHHHHHHHHHHCCCCEEEEEEECCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCC TDKTWTIRLKGDTYRNVLSQGMVYSVHVAVKKPGAYQMRVVMRDATSELIGSASQFIDVP CCCEEEEEECCCHHHHHHHCCCEEEEEEEEECCCCEEEEEEEHHHHHHHHCCHHHCCCCC DIDKGRLALSGIVLRAEASQAKAPAGPEHPEGEQATDIDPQGTPAVRIFKPGTAITYGYQ CCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEE ILNAQADNARQPELEVQTRLFRDGEQVYAGKPTPLPVSGQEDPKRLIGGGRMQLGGKITP EEECCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHCCCEEEECCEECC GDYVLQVIVTDKLAKEKFRVATQSMDFEIKPPADPGK HHHEEEEEEHHHHHHHHHHHHHHCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA