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The map label for this gene is yjeB [C]

Identifier: 116622995

GI number: 116622995

Start: 4930258

End: 4930734

Strand: Direct

Name: yjeB [C]

Synonym: Acid_3899

Alternate gene names: 116622995

Gene position: 4930258-4930734 (Clockwise)

Preceding gene: 116622994

Following gene: 116622996

Centisome position: 49.47

GC content: 56.39

Gene sequence:

>477_bases
ATGATTTATTCTCGTTCGGCCGAGTACGCGATTCGCGCTTTTGTTCACCTCGCCCAGGTGCAAGAGGGCAAATACGCAAT
GGTAAAGAACATTGCGGAGCAGGAAGACATCCCAGCCCACTTCCTGGCCAAGATTCTGCAACAGCTCGCCCGCAAGGGCC
TGTTGCGCTCAAGCAAAGGTCCCACCGGCGGCTTTGCCCTCCGCGTTGACGCCAGTGAGATTCGTCTCCTGGACATCGTC
GAAGCCCTGGACGGCCTTGCCCCGTACCAGCAATGCGCCAGCGGTCTCAGCGAATGCTCTGACGACATGCCCTGTTCCAT
GCATGATAGCTGGATAGCCCTCCGTTCGCGTATCATGGATTATCTGGGGAAAAATACCATCGCCGATCTGGCGAAGGCCC
TGGAGCAGAAGAAAAAGTCTCTGGCGTTGACCAAAAAAAGCAAGGCCAGGAAACCGGTCACCGCCAAGCGAGCATAA

Upstream 100 bases:

>100_bases
TGCAATCTAAACTATGCAGAATTGAAATGACTTGCGCCAAGTCCCGGAAACATTTTAAGATAACGAAGTAGCTTTACTCC
GATTTCAGCGGGGGAGTTTG

Downstream 100 bases:

>100_bases
TTCCGGGTCGGGTTGTTACCGGCCCCATCTAAGAGAGCGGAGGCAAAATGGGACAATCCGTCCTCGTCCCCATGGTGGTC
GAACAGACCTCCCGTGGCGA

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MIYSRSAEYAIRAFVHLAQVQEGKYAMVKNIAEQEDIPAHFLAKILQQLARKGLLRSSKGPTGGFALRVDASEIRLLDIV
EALDGLAPYQQCASGLSECSDDMPCSMHDSWIALRSRIMDYLGKNTIADLAKALEQKKKSLALTKKSKARKPVTAKRA

Sequences:

>Translated_158_residues
MIYSRSAEYAIRAFVHLAQVQEGKYAMVKNIAEQEDIPAHFLAKILQQLARKGLLRSSKGPTGGFALRVDASEIRLLDIV
EALDGLAPYQQCASGLSECSDDMPCSMHDSWIALRSRIMDYLGKNTIADLAKALEQKKKSLALTKKSKARKPVTAKRA
>Mature_158_residues
MIYSRSAEYAIRAFVHLAQVQEGKYAMVKNIAEQEDIPAHFLAKILQQLARKGLLRSSKGPTGGFALRVDASEIRLLDIV
EALDGLAPYQQCASGLSECSDDMPCSMHDSWIALRSRIMDYLGKNTIADLAKALEQKKKSLALTKKSKARKPVTAKRA

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 17451; Mature: 17451

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYSRSAEYAIRAFVHLAQVQEGKYAMVKNIAEQEDIPAHFLAKILQQLARKGLLRSSKG
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
PTGGFALRVDASEIRLLDIVEALDGLAPYQQCASGLSECSDDMPCSMHDSWIALRSRIMD
CCCCEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
YLGKNTIADLAKALEQKKKSLALTKKSKARKPVTAKRA
HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MIYSRSAEYAIRAFVHLAQVQEGKYAMVKNIAEQEDIPAHFLAKILQQLARKGLLRSSKG
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
PTGGFALRVDASEIRLLDIVEALDGLAPYQQCASGLSECSDDMPCSMHDSWIALRSRIMD
CCCCEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
YLGKNTIADLAKALEQKKKSLALTKKSKARKPVTAKRA
HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]