| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622727
Identifier: 116622727
GI number: 116622727
Start: 4589809
End: 4591611
Strand: Reverse
Name: 116622727
Synonym: Acid_3626
Alternate gene names: NA
Gene position: 4591611-4589809 (Counterclockwise)
Preceding gene: 116622730
Following gene: 116622726
Centisome position: 46.07
GC content: 65.67
Gene sequence:
>1803_bases ATGAGCGCAAAGAGCTGTCAACTGTGCGGCAAACCGCTCAGCCGGCTGAGAGTAGGCGGCGACGGAGAGTTCTGCTCGCG CGAGCACCGCAACCAATACGGACTGCGGCGCGGCATGGACCGCTTGCAGGAAGTGGACAAAGTCACCAGCCTCATGCGCC GCCGCGAAAGCCCTCGGCAGATATCGCCGGCGCGCCTGATGTGCAATACCGCGCTTGCAACGCGAGGCTTCCTGCAGCCG CGCACCTATGGCGCCGGTGCGGAACTGGCCCCATTCGCGCCGATATTCCGGATTCCGGAACCGCCGCGCCTCTCAAAGGT CGCCGAACGTTATGTCGCGCCTCGAACCGCCAGGTTCGAAGGCATCATGCAGGTACGGCGCTCCGATACCAGGCAGCTCA GAATCACCGGCCGGAATTCAGCCCTGGAGATGCCTGCCCCCAAGCGGCGCTTGACCACGCAGGTTCCGCAGGCTCCCATG GCAGACCTGCACTGCACAGTACCGGCAGCGGCGGCGTCGCGCCGTAATTTCGCGCTGCTGCGGCAAACCGAAATCCGTGT GCACGCCGGAATGCCGCCCGCGAGTTTGCGGCAGATCGCTCTGCCCGGGACATCGGCCCTCGGTCGAAACCTCCCCAATC GCAAAGTAGGCGCGACACCGCTCGAAGGCAACGCGCTGCGCGTATCGATCGCGCTGGCCTTCGGAGCGCCGGGCGTCAGC CGGAGAGTGTTCGTGACGCCGCCCGCGATGTCGTCGGCGCTGGTGTGGCCGCGGACAGCGCACGGCGTATGGCCGGAGAC CAAGAACACCACCGCGCGGCCGCGAAACCTGGCCGTGCGGATGACCAATCCGCAGACCTGCCTCCCGGCGGCGCGCGAAG GCCAGCGCCGTTCCCAATTCGTTTTTCCGGGACCGCTGCGGCCGGGCAAGCAGAAACCGCGCACCAACGGCATGCCGCCG GCGCGCACCACGGACGTTTCCTGGATTCTCTCCGACCCCCGGACTGGTGGGATCGGCGTCCCGCCCACTTCGGCGGGCTT TGCCAAACGCAACGGCGTGCACCTCTGCAATCTGACGCTGGCGCCCACAACCACGAATCCAACCCACCTCGTCGCCTTCC GCCCGTTCCTGCCGCAGGAACCGGTAGGCTGCCCGATGGTGCCGTTTGAAGGAACCACCGCCGCGTCCATCATCACCGCT CCCGCGGCCGGGGCCCCGGGCACTGCCGCGGATGCGCCTCCGGCGGCCGAGGAAGCCGCGCCGGTCGCCCAAGTTCGCCT GGAAGAGCACTTCGGTTCGGGCTGGGAAAACTGGGAAGGCGGCACCAACGACTGGCTGGTGGACGTGGCGGGAGTCCGCA CTGGCTCCCTGGCTCTCTTCCAGCCCACCATGGACCTGGTGGATTACGAATTGGAATTCCTGGCGCGCATCGACACCAGG AGCCTGACATGGGTAGTGCGCGCGACCGATTTGCAGGAGTACATGCGCTGCACTCTCACCGCGATTCCCGGCGGAGAGCT GGAATTCAGCCGCACCGTAGTGCGCAGCGGAATCGGCGAGGAAACCGTCATCGCTCCGGTCCGGATTCCCGGCAAGCCGA GGGCTGCAATGACGGTGCGCACACGGGTTTCAGGCGACACATTTTCGGTGACCGTGGACGGTAAGGACATGGACACCTGG CAGGAAGACCGCCTCTATTGCGGCGGTATCGGTTTCATGGGCGCTCATGACGATCGCGCCCGACTCTATTGGGTTAGGAT CTCCTCTTCAGACAATATCGGCAAGGAGCATCAGAAGAAATGA
Upstream 100 bases:
>100_bases AACAAAAGGCTCTCTGGTACCATAACCTACGATATCATCCGAATACTGTCGCCATTTATCCTAGCAATTCCTGCGTTATT TACATATAATTACCCCGAAA
Downstream 100 bases:
>100_bases GCACAGCAATGAGAACGCCCCAGAAAGTACAGAGCCTGCGCACACACGACATCGACGCCGGCGAAAAGACGGCCGGTTCG CAGAGTCATCTGGCGCGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 600; Mature: 599
Protein sequence:
>600_residues MSAKSCQLCGKPLSRLRVGGDGEFCSREHRNQYGLRRGMDRLQEVDKVTSLMRRRESPRQISPARLMCNTALATRGFLQP RTYGAGAELAPFAPIFRIPEPPRLSKVAERYVAPRTARFEGIMQVRRSDTRQLRITGRNSALEMPAPKRRLTTQVPQAPM ADLHCTVPAAAASRRNFALLRQTEIRVHAGMPPASLRQIALPGTSALGRNLPNRKVGATPLEGNALRVSIALAFGAPGVS RRVFVTPPAMSSALVWPRTAHGVWPETKNTTARPRNLAVRMTNPQTCLPAAREGQRRSQFVFPGPLRPGKQKPRTNGMPP ARTTDVSWILSDPRTGGIGVPPTSAGFAKRNGVHLCNLTLAPTTTNPTHLVAFRPFLPQEPVGCPMVPFEGTTAASIITA PAAGAPGTAADAPPAAEEAAPVAQVRLEEHFGSGWENWEGGTNDWLVDVAGVRTGSLALFQPTMDLVDYELEFLARIDTR SLTWVVRATDLQEYMRCTLTAIPGGELEFSRTVVRSGIGEETVIAPVRIPGKPRAAMTVRTRVSGDTFSVTVDGKDMDTW QEDRLYCGGIGFMGAHDDRARLYWVRISSSDNIGKEHQKK
Sequences:
>Translated_600_residues MSAKSCQLCGKPLSRLRVGGDGEFCSREHRNQYGLRRGMDRLQEVDKVTSLMRRRESPRQISPARLMCNTALATRGFLQP RTYGAGAELAPFAPIFRIPEPPRLSKVAERYVAPRTARFEGIMQVRRSDTRQLRITGRNSALEMPAPKRRLTTQVPQAPM ADLHCTVPAAAASRRNFALLRQTEIRVHAGMPPASLRQIALPGTSALGRNLPNRKVGATPLEGNALRVSIALAFGAPGVS RRVFVTPPAMSSALVWPRTAHGVWPETKNTTARPRNLAVRMTNPQTCLPAAREGQRRSQFVFPGPLRPGKQKPRTNGMPP ARTTDVSWILSDPRTGGIGVPPTSAGFAKRNGVHLCNLTLAPTTTNPTHLVAFRPFLPQEPVGCPMVPFEGTTAASIITA PAAGAPGTAADAPPAAEEAAPVAQVRLEEHFGSGWENWEGGTNDWLVDVAGVRTGSLALFQPTMDLVDYELEFLARIDTR SLTWVVRATDLQEYMRCTLTAIPGGELEFSRTVVRSGIGEETVIAPVRIPGKPRAAMTVRTRVSGDTFSVTVDGKDMDTW QEDRLYCGGIGFMGAHDDRARLYWVRISSSDNIGKEHQKK >Mature_599_residues SAKSCQLCGKPLSRLRVGGDGEFCSREHRNQYGLRRGMDRLQEVDKVTSLMRRRESPRQISPARLMCNTALATRGFLQPR TYGAGAELAPFAPIFRIPEPPRLSKVAERYVAPRTARFEGIMQVRRSDTRQLRITGRNSALEMPAPKRRLTTQVPQAPMA DLHCTVPAAAASRRNFALLRQTEIRVHAGMPPASLRQIALPGTSALGRNLPNRKVGATPLEGNALRVSIALAFGAPGVSR RVFVTPPAMSSALVWPRTAHGVWPETKNTTARPRNLAVRMTNPQTCLPAAREGQRRSQFVFPGPLRPGKQKPRTNGMPPA RTTDVSWILSDPRTGGIGVPPTSAGFAKRNGVHLCNLTLAPTTTNPTHLVAFRPFLPQEPVGCPMVPFEGTTAASIITAP AAGAPGTAADAPPAAEEAAPVAQVRLEEHFGSGWENWEGGTNDWLVDVAGVRTGSLALFQPTMDLVDYELEFLARIDTRS LTWVVRATDLQEYMRCTLTAIPGGELEFSRTVVRSGIGEETVIAPVRIPGKPRAAMTVRTRVSGDTFSVTVDGKDMDTWQ EDRLYCGGIGFMGAHDDRARLYWVRISSSDNIGKEHQKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65491; Mature: 65360
Theoretical pI: Translated: 10.97; Mature: 10.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAKSCQLCGKPLSRLRVGGDGEFCSREHRNQYGLRRGMDRLQEVDKVTSLMRRRESPRQ CCCCCCHHHCCCHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ISPARLMCNTALATRGFLQPRTYGAGAELAPFAPIFRIPEPPRLSKVAERYVAPRTARFE CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHCCCCHHHHH GIMQVRRSDTRQLRITGRNSALEMPAPKRRLTTQVPQAPMADLHCTVPAAAASRRNFALL HHHHHHCCCCEEEEEECCCCEECCCCCHHHHHHCCCCCCCCCEEEECCHHHCCCCCEEEE RQTEIRVHAGMPPASLRQIALPGTSALGRNLPNRKVGATPLEGNALRVSIALAFGAPGVS EEEEEEEECCCCCHHHHEEECCCCHHHHCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCC RRVFVTPPAMSSALVWPRTAHGVWPETKNTTARPRNLAVRMTNPQTCLPAAREGQRRSQF CEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHCCCCCCCE VFPGPLRPGKQKPRTNGMPPARTTDVSWILSDPRTGGIGVPPTSAGFAKRNGVHLCNLTL ECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEE APTTTNPTHLVAFRPFLPQEPVGCPMVPFEGTTAASIITAPAAGAPGTAADAPPAAEEAA CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHCC PVAQVRLEEHFGSGWENWEGGTNDWLVDVAGVRTGSLALFQPTMDLVDYELEFLARIDTR CHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCHHHHHHHHHHHHHCCCC SLTWVVRATDLQEYMRCTLTAIPGGELEFSRTVVRSGIGEETVIAPVRIPGKPRAAMTVR CEEEEEEEHHHHHHHHEEEEECCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEE TRVSGDTFSVTVDGKDMDTWQEDRLYCGGIGFMGAHDDRARLYWVRISSSDNIGKEHQKK EEECCCEEEEEECCCCCCCHHHCCEEECCEECCCCCCCCEEEEEEEECCCCCCCHHHCCC >Mature Secondary Structure SAKSCQLCGKPLSRLRVGGDGEFCSREHRNQYGLRRGMDRLQEVDKVTSLMRRRESPRQ CCCCCHHHCCCHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ISPARLMCNTALATRGFLQPRTYGAGAELAPFAPIFRIPEPPRLSKVAERYVAPRTARFE CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHCCCCHHHHH GIMQVRRSDTRQLRITGRNSALEMPAPKRRLTTQVPQAPMADLHCTVPAAAASRRNFALL HHHHHHCCCCEEEEEECCCCEECCCCCHHHHHHCCCCCCCCCEEEECCHHHCCCCCEEEE RQTEIRVHAGMPPASLRQIALPGTSALGRNLPNRKVGATPLEGNALRVSIALAFGAPGVS EEEEEEEECCCCCHHHHEEECCCCHHHHCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCC RRVFVTPPAMSSALVWPRTAHGVWPETKNTTARPRNLAVRMTNPQTCLPAAREGQRRSQF CEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHCCCCCCCE VFPGPLRPGKQKPRTNGMPPARTTDVSWILSDPRTGGIGVPPTSAGFAKRNGVHLCNLTL ECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEE APTTTNPTHLVAFRPFLPQEPVGCPMVPFEGTTAASIITAPAAGAPGTAADAPPAAEEAA CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHCC PVAQVRLEEHFGSGWENWEGGTNDWLVDVAGVRTGSLALFQPTMDLVDYELEFLARIDTR CHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCHHHHHHHHHHHHHCCCC SLTWVVRATDLQEYMRCTLTAIPGGELEFSRTVVRSGIGEETVIAPVRIPGKPRAAMTVR CEEEEEEEHHHHHHHHEEEEECCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEE TRVSGDTFSVTVDGKDMDTWQEDRLYCGGIGFMGAHDDRARLYWVRISSSDNIGKEHQKK EEECCCEEEEEECCCCCCCHHHCCEEECCEECCCCCCCCEEEEEEEECCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA