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The map label for this gene is 116622595

Identifier: 116622595

GI number: 116622595

Start: 4420805

End: 4422259

Strand: Direct

Name: 116622595

Synonym: Acid_3493

Alternate gene names: NA

Gene position: 4420805-4422259 (Clockwise)

Preceding gene: 116622587

Following gene: 116622596

Centisome position: 44.36

GC content: 65.09

Gene sequence:

>1455_bases
TTGCCGATTCGCCTGTGGTTCGCCCTATCGATTGCGACCCTGACGGGCTACGCGCAGCCTGCCGGATGTGCCATGGATCG
TGCAGTTCGGCTGCACCAGACCGGGGATTTCCCTGGTGCCATCCGTGAATACCAGGCCTGCATCGCCGCCGAGCCGGCCC
GGGTGGAGGCGCGCTCCAACTTGGGCGCCGTCCTGGCGAAACTCGGGCGCTATCAGGACGCCATCGATCAGTATCAGGCT
GCATTAAGGATGGCTCCGCGTGATCTGGCTTCCCGCCTTCGATTCAACCTGGCTCTCGCCTACTACAAATCATTCCAGAT
CCCCGAAGCGGTCGCCGAGTTCGAGACGCTCCGCGGCGAACAACCCGCCGACCTCAACCTCGCCCTCCTGCTCGCCGACT
GCCGGTTGAGGACCGGCGATTTCCAGGCTGCAATCGACGTCCTGACTCCGCTCGAGGCGTCCCAGCCGGACCAGCCGGCG
CTGGACTACGTCCTTGGGATGGCGCTGCTTCGCACTGGCCGGATACCCGAAGGCCAGGCGAGGGTCGATCGCATCCTGCG
CCGCGGCGAGTCGGCCGAGGGCCGCTTCCTGTTGGGGGCATCCTTATTCATGGCGGGAAACTTCCCGGGCGCCGTCGCGG
AGTTTTCCAAGGCCGCCGCGCTTGACCCCAACCTGCCTTCGCTGCAGTCTTACTACGGCCAGGCCTTGCTCTTCACCGGG
GACGCCGATGGCGCCGCCGTGGCCTTTCGCAAAGAACTCGCCGCGAATCCGAACGATTTCGACGCCAATTTTCAACTCGC
CTCCATTCTTGCCCATCGTGGCAAGCCGGACGAAGCTCGCCCGCTGCTCGCGCGCGCCGTGCAGGTGCGCCCTGGTTCGG
CCGAGGCGCGCGAGGCCTTGGGGAAGGGTTTTCCCGCGGACCAGCCGACCCAGGCCGACCCCGGCATCGCGGTCGGGTCC
CGAGCGCCTGCGATCGGAACCCTCGATCTCGGCCGCCCCACAAAACCCGTGGTTCTGGTCTTCGGCAGTTACACCTGCCC
CAAGCTGCGTAGTTCGGCAGCCGCGTTGAAACGCATCGCGGAGCAGTATCGCGACCGCATCGATTTTCGCTTGGTCTACA
TCCGCGAAGCCCACGCGCAGGGCGGCCCCGAGAGTCAGTGGCAAAGCACCATCAATATAAAGGAAGGCGTATCGCTGGCT
CCCGCTCGCACCCTGCCCGAGAAGCAGGAGCATGCCGCGCTCTGCCTGCGCAAGTTGGAGCTTCCCTTTCCTGCCGTTAT
CGATGGCATGGATGGCGCCGCCGAAACCGCCTACCAGGCCTGGCCCAGCCGTCTCTATCTGGTAGGCCGCGACGGCAAAG
TCGCGTTTAGCACCCGGCTCGGCGAGCTTGAATTCCGCCCCGCTGACCTGGAAACCGCGATTCGTGAGATCCTGTCAAAA
ACGGGGGTCGAATGA

Upstream 100 bases:

>100_bases
ACGTTCTGTTGCGAGCTCCGCCTCCTGTTAATGGGCGACCTCCGGAGTACCAGTCCGGTTCGATGGTGATAAAATCGGAA
ACCTGGAAGCGAGGAATCTG

Downstream 100 bases:

>100_bases
CGCTTCGCAGCAGTGCGCTCGGTCTCGCGGTCGCGGCATGGCTCGCTTTTGGCGCAATCGCGGAGCAGTCTTCGCCCGAC
GCGCTGCTCCGCCACGCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide Repeat Domain Protein; TPR Domain Protein; Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Family; Peptidase S1 And S6 Chymotrypsin/Hap; Tetratricopeptide Repeat-Containing Protein; SPY Protein; Glycosyl Transferase Family Protein; Deiodinase Iodothyronine Type I; TPR Domain-Containing Protein

Number of amino acids: Translated: 484; Mature: 483

Protein sequence:

>484_residues
MPIRLWFALSIATLTGYAQPAGCAMDRAVRLHQTGDFPGAIREYQACIAAEPARVEARSNLGAVLAKLGRYQDAIDQYQA
ALRMAPRDLASRLRFNLALAYYKSFQIPEAVAEFETLRGEQPADLNLALLLADCRLRTGDFQAAIDVLTPLEASQPDQPA
LDYVLGMALLRTGRIPEGQARVDRILRRGESAEGRFLLGASLFMAGNFPGAVAEFSKAAALDPNLPSLQSYYGQALLFTG
DADGAAVAFRKELAANPNDFDANFQLASILAHRGKPDEARPLLARAVQVRPGSAEAREALGKGFPADQPTQADPGIAVGS
RAPAIGTLDLGRPTKPVVLVFGSYTCPKLRSSAAALKRIAEQYRDRIDFRLVYIREAHAQGGPESQWQSTINIKEGVSLA
PARTLPEKQEHAALCLRKLELPFPAVIDGMDGAAETAYQAWPSRLYLVGRDGKVAFSTRLGELEFRPADLETAIREILSK
TGVE

Sequences:

>Translated_484_residues
MPIRLWFALSIATLTGYAQPAGCAMDRAVRLHQTGDFPGAIREYQACIAAEPARVEARSNLGAVLAKLGRYQDAIDQYQA
ALRMAPRDLASRLRFNLALAYYKSFQIPEAVAEFETLRGEQPADLNLALLLADCRLRTGDFQAAIDVLTPLEASQPDQPA
LDYVLGMALLRTGRIPEGQARVDRILRRGESAEGRFLLGASLFMAGNFPGAVAEFSKAAALDPNLPSLQSYYGQALLFTG
DADGAAVAFRKELAANPNDFDANFQLASILAHRGKPDEARPLLARAVQVRPGSAEAREALGKGFPADQPTQADPGIAVGS
RAPAIGTLDLGRPTKPVVLVFGSYTCPKLRSSAAALKRIAEQYRDRIDFRLVYIREAHAQGGPESQWQSTINIKEGVSLA
PARTLPEKQEHAALCLRKLELPFPAVIDGMDGAAETAYQAWPSRLYLVGRDGKVAFSTRLGELEFRPADLETAIREILSK
TGVE
>Mature_483_residues
PIRLWFALSIATLTGYAQPAGCAMDRAVRLHQTGDFPGAIREYQACIAAEPARVEARSNLGAVLAKLGRYQDAIDQYQAA
LRMAPRDLASRLRFNLALAYYKSFQIPEAVAEFETLRGEQPADLNLALLLADCRLRTGDFQAAIDVLTPLEASQPDQPAL
DYVLGMALLRTGRIPEGQARVDRILRRGESAEGRFLLGASLFMAGNFPGAVAEFSKAAALDPNLPSLQSYYGQALLFTGD
ADGAAVAFRKELAANPNDFDANFQLASILAHRGKPDEARPLLARAVQVRPGSAEAREALGKGFPADQPTQADPGIAVGSR
APAIGTLDLGRPTKPVVLVFGSYTCPKLRSSAAALKRIAEQYRDRIDFRLVYIREAHAQGGPESQWQSTINIKEGVSLAP
ARTLPEKQEHAALCLRKLELPFPAVIDGMDGAAETAYQAWPSRLYLVGRDGKVAFSTRLGELEFRPADLETAIREILSKT
GVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52442; Mature: 52311

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIRLWFALSIATLTGYAQPAGCAMDRAVRLHQTGDFPGAIREYQACIAAEPARVEARSN
CCEEEEEHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHH
LGAVLAKLGRYQDAIDQYQAALRMAPRDLASRLRFNLALAYYKSFQIPEAVAEFETLRGE
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
QPADLNLALLLADCRLRTGDFQAAIDVLTPLEASQPDQPALDYVLGMALLRTGRIPEGQA
CCCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHH
RVDRILRRGESAEGRFLLGASLFMAGNFPGAVAEFSKAAALDPNLPSLQSYYGQALLFTG
HHHHHHHCCCCCCCCEEEEEHEEECCCCCCHHHHHHHHHCCCCCCCHHHHHCCCEEEEEC
DADGAAVAFRKELAANPNDFDANFQLASILAHRGKPDEARPLLARAVQVRPGSAEAREAL
CCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHH
GKGFPADQPTQADPGIAVGSRAPAIGTLDLGRPTKPVVLVFGSYTCPKLRSSAAALKRIA
HCCCCCCCCCCCCCCCEECCCCCCEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHH
EQYRDRIDFRLVYIREAHAQGGPESQWQSTINIKEGVSLAPARTLPEKQEHAALCLRKLE
HHHHHCCCEEEEEEEECCCCCCCHHHHHHHCCHHCCCCCCCCCCCCCHHHHHHHHHHHHC
LPFPAVIDGMDGAAETAYQAWPSRLYLVGRDGKVAFSTRLGELEFRPADLETAIREILSK
CCCHHHHCCCCCHHHHHHHHCCCEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHH
TGVE
CCCC
>Mature Secondary Structure 
PIRLWFALSIATLTGYAQPAGCAMDRAVRLHQTGDFPGAIREYQACIAAEPARVEARSN
CEEEEEHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHH
LGAVLAKLGRYQDAIDQYQAALRMAPRDLASRLRFNLALAYYKSFQIPEAVAEFETLRGE
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
QPADLNLALLLADCRLRTGDFQAAIDVLTPLEASQPDQPALDYVLGMALLRTGRIPEGQA
CCCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHH
RVDRILRRGESAEGRFLLGASLFMAGNFPGAVAEFSKAAALDPNLPSLQSYYGQALLFTG
HHHHHHHCCCCCCCCEEEEEHEEECCCCCCHHHHHHHHHCCCCCCCHHHHHCCCEEEEEC
DADGAAVAFRKELAANPNDFDANFQLASILAHRGKPDEARPLLARAVQVRPGSAEAREAL
CCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHH
GKGFPADQPTQADPGIAVGSRAPAIGTLDLGRPTKPVVLVFGSYTCPKLRSSAAALKRIA
HCCCCCCCCCCCCCCCEECCCCCCEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHH
EQYRDRIDFRLVYIREAHAQGGPESQWQSTINIKEGVSLAPARTLPEKQEHAALCLRKLE
HHHHHCCCEEEEEEEECCCCCCCHHHHHHHCCHHCCCCCCCCCCCCCHHHHHHHHHHHHC
LPFPAVIDGMDGAAETAYQAWPSRLYLVGRDGKVAFSTRLGELEFRPADLETAIREILSK
CCCHHHHCCCCCHHHHHHHHCCCEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHH
TGVE
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA