| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622587
Identifier: 116622587
GI number: 116622587
Start: 4407928
End: 4409592
Strand: Direct
Name: 116622587
Synonym: Acid_3485
Alternate gene names: NA
Gene position: 4407928-4409592 (Clockwise)
Preceding gene: 116622586
Following gene: 116622595
Centisome position: 44.23
GC content: 60.48
Gene sequence:
>1665_bases ATGAGATTTTGTAAGGGCGCGATCGCCGGGGTATCCCTGACCGCGGCGATTCTGGCGGGCTTCGCGGCCGCACTGCCGGC GGGCGTGGAGTTTACCGATGTGACCGCGCAGGCCGGCATACGCTTCACGCACAATAGCGGACGCGCCGGCAGGAAGTATC TGCCGGAAACTCTTGGCTCCGGCTGCGCGTTCTTCGATGTTGACGGCGATGGCTGGCCCGACATCCTGATGGTGAATAGT AAGGACTGGACGCCGCGCGGCCGCAAATCGCTCGCGGCTCTCTACCGCAACAACCACAACGGCACCTTCACCGACATCAC TGCGGGCAGCGGCCTGGACATCGAAATGTACGGTCTGGGCGTGGCCATCGCCGATTACGACAACGATGGCCGCGAAGACG TTTACATCACCGCGCTCGATGGCGACCACCTCTTTCACAATGAGGGTAACGGCAAATTTCGCGATGTGACCAAGTCCGCC GGAATTCAGAACGCCAACTTCGGCACCAGCGCGGCGTGGCTGGACTACGACCGCGACGGCAAGCTGGACCTATTCGTCGC CAACTATGTGCAGTGGACCCCGAAGAACGATCTCTTCTGTTCGCTTGATGGCGCCGCGAAATCGTACTGCACCCCCGAAT CCTACAAGGGTACGCGCAGCCGTCTATTCCACAACCTGGGTGGAGGCCGGTTCGAGGACGTCGGGGAGAAGGCGGGGATC GGCGATCCGACGAGTAAGTCGCTGGGTGTAACCGTGCTCGATTACAACGCCGACGGATGGCCGGACCTTTTCGTGGCCAA CGACACGCAGCCCAACAAGCTGTATCGCAATAACAAGAACGGCACCTTCACCGAAGAGGGCATGACTGCCGGCGTGGCGT ACGGAGAGGACGGAGTTGCGCGCGGGGCGATGGGCGCCGATTCGGCCGATTACGACCGCAGCGGCCGTCCGCACTTGCTG GTGGGCAACTTCTCCAACCAGATGCTTGGCCTTTACCACAACGAAGGCAACGGCCTGTTCGTGGATGAAGCCCCGTCATC TGCGGTTGGCCGCTCCAGTCTCTTATCGCTCGCCTTCGGCGTTTTCTTCTTCGACTATGATCTCGATGGTTACCCCGATA TCTTCGCCGTCAACGGTCACATCGAAGAGGAGATCGGCAAGGTCCAGCCGAAGGTCAGTTATCGCGAGGCGCCCCTGCTA TTTCGTAACCTGGGCAATCACAAATTCGAAAACGTGACCGGCGGAATGGGCGCGGCCTTCAACCGGCAGATCGTGGGGCG CGGAGCGGCGTACGCTGATTTCGACCACGATGGCGATCTCGACCTGCTGATTTCCACCAATCACGGACCGGCCTACCTGT TCCGCAATGATGGCGGCAATCGCAATCACTGGCTGTCCGTGAGATTATCGGGCACAAAGTCGAACCGCGATGGAATCGGC GCAGTCGTGCGTCTGGAAAGCGCGACGGGCAAACAGTGGAGCATGGTGCGCAGCGGTTCGAGTTACTGTTCGCAAAGCGA CCTGGCATTGACGTTCGGACTCGGCAAAGACAGCGCGGCAACGCTCGTAGTGGAATGGCCCAGCGGTGTCAGGCAGCAGC TCGGCAAAGTCGCCGCCGACCAGTTCCTCACCATCGACGAGGATCGCGGAATTACTAAACGGTAA
Upstream 100 bases:
>100_bases CGCAGTCCATCACGGCCAAGCGGCGGGCGTTGAGTCCCGAGGACAATAACGAACGGCAAGCCGTGCATGATCATGAGAAT TCGGTAAAGGGAGTGACGCG
Downstream 100 bases:
>100_bases TCGATCGTCAAGCTCGAGTAAGCGCGCTTGTACTACTGTGCATCTGCTTGCTCGCAGCCCGCAAAGAATTCGCCGTCCCA TCAGAGGCGCGACCGTCAGG
Product: ASPIC/UnbV domain-containing protein
Products: NA
Alternate protein names: FG-GAP Repeat Domain Protein; ASPIC/UnbV Domain Protein; FG-GAP Repeat-Containing Protein; FG-GAP Repeat Protein; ASPIC/UnbV; TPR Repeat-Containing Protein; PpiC-Type Peptidyl-Prolyl Cis-Trans Isomerase; Aspic/Unbv; Rhs Family Protein; Aspic/Unbv Domain Protein; FG-GAP Repeat- ASPIC/UnbV Domain-Containing Protein; Integrin-Like Protein; Protein Containing FG-GAP Repeats; Secreted Protein Containing FG-GAP Repeats; Fg-Gap Repeat Protein; ASPIC And UnbV Domain Protein; FG-GAP Repeat Domain-Containing Protein; Fg-Gap Repeat/Aspic/Unbv Domain Protein; Invasin/Intimin Cell-Adhesion Domain Protein; RTX Family Protein Exoprotein; Protein Tyrosine Kinase Family; FG-GAP Repeat Protein/ASPIC/UnbV Domain Protein; Acid Secreted Protein ASPIC
Number of amino acids: Translated: 554; Mature: 554
Protein sequence:
>554_residues MRFCKGAIAGVSLTAAILAGFAAALPAGVEFTDVTAQAGIRFTHNSGRAGRKYLPETLGSGCAFFDVDGDGWPDILMVNS KDWTPRGRKSLAALYRNNHNGTFTDITAGSGLDIEMYGLGVAIADYDNDGREDVYITALDGDHLFHNEGNGKFRDVTKSA GIQNANFGTSAAWLDYDRDGKLDLFVANYVQWTPKNDLFCSLDGAAKSYCTPESYKGTRSRLFHNLGGGRFEDVGEKAGI GDPTSKSLGVTVLDYNADGWPDLFVANDTQPNKLYRNNKNGTFTEEGMTAGVAYGEDGVARGAMGADSADYDRSGRPHLL VGNFSNQMLGLYHNEGNGLFVDEAPSSAVGRSSLLSLAFGVFFFDYDLDGYPDIFAVNGHIEEEIGKVQPKVSYREAPLL FRNLGNHKFENVTGGMGAAFNRQIVGRGAAYADFDHDGDLDLLISTNHGPAYLFRNDGGNRNHWLSVRLSGTKSNRDGIG AVVRLESATGKQWSMVRSGSSYCSQSDLALTFGLGKDSAATLVVEWPSGVRQQLGKVAADQFLTIDEDRGITKR
Sequences:
>Translated_554_residues MRFCKGAIAGVSLTAAILAGFAAALPAGVEFTDVTAQAGIRFTHNSGRAGRKYLPETLGSGCAFFDVDGDGWPDILMVNS KDWTPRGRKSLAALYRNNHNGTFTDITAGSGLDIEMYGLGVAIADYDNDGREDVYITALDGDHLFHNEGNGKFRDVTKSA GIQNANFGTSAAWLDYDRDGKLDLFVANYVQWTPKNDLFCSLDGAAKSYCTPESYKGTRSRLFHNLGGGRFEDVGEKAGI GDPTSKSLGVTVLDYNADGWPDLFVANDTQPNKLYRNNKNGTFTEEGMTAGVAYGEDGVARGAMGADSADYDRSGRPHLL VGNFSNQMLGLYHNEGNGLFVDEAPSSAVGRSSLLSLAFGVFFFDYDLDGYPDIFAVNGHIEEEIGKVQPKVSYREAPLL FRNLGNHKFENVTGGMGAAFNRQIVGRGAAYADFDHDGDLDLLISTNHGPAYLFRNDGGNRNHWLSVRLSGTKSNRDGIG AVVRLESATGKQWSMVRSGSSYCSQSDLALTFGLGKDSAATLVVEWPSGVRQQLGKVAADQFLTIDEDRGITKR >Mature_554_residues MRFCKGAIAGVSLTAAILAGFAAALPAGVEFTDVTAQAGIRFTHNSGRAGRKYLPETLGSGCAFFDVDGDGWPDILMVNS KDWTPRGRKSLAALYRNNHNGTFTDITAGSGLDIEMYGLGVAIADYDNDGREDVYITALDGDHLFHNEGNGKFRDVTKSA GIQNANFGTSAAWLDYDRDGKLDLFVANYVQWTPKNDLFCSLDGAAKSYCTPESYKGTRSRLFHNLGGGRFEDVGEKAGI GDPTSKSLGVTVLDYNADGWPDLFVANDTQPNKLYRNNKNGTFTEEGMTAGVAYGEDGVARGAMGADSADYDRSGRPHLL VGNFSNQMLGLYHNEGNGLFVDEAPSSAVGRSSLLSLAFGVFFFDYDLDGYPDIFAVNGHIEEEIGKVQPKVSYREAPLL FRNLGNHKFENVTGGMGAAFNRQIVGRGAAYADFDHDGDLDLLISTNHGPAYLFRNDGGNRNHWLSVRLSGTKSNRDGIG AVVRLESATGKQWSMVRSGSSYCSQSDLALTFGLGKDSAATLVVEWPSGVRQQLGKVAADQFLTIDEDRGITKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI47777317, Length=508, Percent_Identity=27.3622047244095, Blast_Score=109, Evalue=8e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59777; Mature: 59777
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFCKGAIAGVSLTAAILAGFAAALPAGVEFTDVTAQAGIRFTHNSGRAGRKYLPETLGS CCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHCCEEEEECCCCCCHHHCHHHHCC GCAFFDVDGDGWPDILMVNSKDWTPRGRKSLAALYRNNHNGTFTDITAGSGLDIEMYGLG CEEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEE VAIADYDNDGREDVYITALDGDHLFHNEGNGKFRDVTKSAGIQNANFGTSAAWLDYDRDG EEEEECCCCCCCEEEEEEECCCEEEECCCCCCEEEHHHHCCCCCCCCCCCEEEEEECCCC KLDLFVANYVQWTPKNDLFCSLDGAAKSYCTPESYKGTRSRLFHNLGGGRFEDVGEKAGI CEEEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHCCC GDPTSKSLGVTVLDYNADGWPDLFVANDTQPNKLYRNNKNGTFTEEGMTAGVAYGEDGVA CCCCCCCCEEEEEEECCCCCCCEEEECCCCCHHHEECCCCCCEECCCCEEEEEECCCCCC RGAMGADSADYDRSGRPHLLVGNFSNQMLGLYHNEGNGLFVDEAPSSAVGRSSLLSLAFG CCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHE VFFFDYDLDGYPDIFAVNGHIEEEIGKVQPKVSYREAPLLFRNLGNHKFENVTGGMGAAF EEEEEECCCCCCCEEEECCCHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHH NRQIVGRGAAYADFDHDGDLDLLISTNHGPAYLFRNDGGNRNHWLSVRLSGTKSNRDGIG CHHEEECCCEEECCCCCCCEEEEEECCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCE AVVRLESATGKQWSMVRSGSSYCSQSDLALTFGLGKDSAATLVVEWPSGVRQQLGKVAAD EEEEEECCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHH QFLTIDEDRGITKR HEEEEECCCCCCCC >Mature Secondary Structure MRFCKGAIAGVSLTAAILAGFAAALPAGVEFTDVTAQAGIRFTHNSGRAGRKYLPETLGS CCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHCCEEEEECCCCCCHHHCHHHHCC GCAFFDVDGDGWPDILMVNSKDWTPRGRKSLAALYRNNHNGTFTDITAGSGLDIEMYGLG CEEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEE VAIADYDNDGREDVYITALDGDHLFHNEGNGKFRDVTKSAGIQNANFGTSAAWLDYDRDG EEEEECCCCCCCEEEEEEECCCEEEECCCCCCEEEHHHHCCCCCCCCCCCEEEEEECCCC KLDLFVANYVQWTPKNDLFCSLDGAAKSYCTPESYKGTRSRLFHNLGGGRFEDVGEKAGI CEEEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHCCC GDPTSKSLGVTVLDYNADGWPDLFVANDTQPNKLYRNNKNGTFTEEGMTAGVAYGEDGVA CCCCCCCCEEEEEEECCCCCCCEEEECCCCCHHHEECCCCCCEECCCCEEEEEECCCCCC RGAMGADSADYDRSGRPHLLVGNFSNQMLGLYHNEGNGLFVDEAPSSAVGRSSLLSLAFG CCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHE VFFFDYDLDGYPDIFAVNGHIEEEIGKVQPKVSYREAPLLFRNLGNHKFENVTGGMGAAF EEEEEECCCCCCCEEEECCCHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHH NRQIVGRGAAYADFDHDGDLDLLISTNHGPAYLFRNDGGNRNHWLSVRLSGTKSNRDGIG CHHEEECCCEEECCCCCCCEEEEEECCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCE AVVRLESATGKQWSMVRSGSSYCSQSDLALTFGLGKDSAATLVVEWPSGVRQQLGKVAAD EEEEEECCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHH QFLTIDEDRGITKR HEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA