| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is macB [H]
Identifier: 116621929
GI number: 116621929
Start: 3565147
End: 3567687
Strand: Direct
Name: macB [H]
Synonym: Acid_2814
Alternate gene names: 116621929
Gene position: 3565147-3567687 (Clockwise)
Preceding gene: 116621927
Following gene: 116621930
Centisome position: 35.77
GC content: 66.04
Gene sequence:
>2541_bases ATGATCGACACCACCTCGCAGGATCTGCGCTTCACGCTTCGTCAGTTGGCGAAAAGTAAAGGATTCACCCTAACCGCCGT AATGACGGTAGCGCTGGCAATCGGCGCCAACACTGCTATTTTCACACTGGTAAACGCGGTCATGCTGAAATCCTTGCCGG TGGCCGACCCGGCGCGCCTGTACCGGCTCGGCGATGGCGACAACTGCTGCGTGATCGGCGGGCTGCAGGGCCGCTTTTCC ATCTACTCGTATCCGCTCTACGAATACCTGCGCGATCATACGCCGGAGTTCGAACAGATGGCGGCTTTCCAGGGCGGCCC GGCGGAGGTGGGTGTTCATCGCTCGGGACCCGGCCAGATTAACGAGCCGTTGGTGGACCAGTTTGTCTCCGGCAATTACT TCTCGCTATTCGGACTGCGGCCGTACGCCGGGCGGTTGCTCACTCCGGCTGACGACACGCGCGGCGCCGCGCCGGTCGCG GTGATGAGCTACCGCGTCTGGCGGCAGCAGTACGGGGCGGACCCGAGCGTGGTGGGTGCGACGTTCGTGATCGATGGGTA CCCGTTCACGATCGCGGGGATCGCGCCTCCCGGTTTCTTCGGCGACACGATGCGGCCAGATCCGCCGGATTTCTGGCTGC CTCTGTCCACGGAACCGGCCGTCCACCAGAAAAACGCGCTGCTGGATCGGAAGCAGGATTACTGGCTCTACGCCTTCGGG CGGGTGCGGTCCGGCACTGCGTTGGGCGCGCTGGAGGCCAAGGTCAATGTGCTGATGAAGCAGTGGATGGCGGAAAACGA TCCGCCGATGACGGCGCAGCAGAAGCAGGCCTTCGACCGGCAACATATTACCCTGGCGCCGGGCGGCAGCGGCATTCAAC TGATGCAGGCGGGATACGGCTCGGATCTCAAACTGCTGATGGCGGTCACCGGTCTGGTGCTCTTGATCGCGTGCGCGAAC CTGGCGAATCTTCTGCTGGCGCGCGGCGCGGCGACGCGTGCGCAAGCGTCGATCCGCATGGCGCTAGGCGCGCCGCGCGC CAGGCTGATCCGGCAGACCCTGACCGAAGCCCTAACGATCGCCATACTGGGCGGCGCGATCGGCGTCTTCTTCGCGGTGG TGGGCACGGACGCGTTGCTGCGGCTGACGTTCAGCGCGGCGCGCTTCGTGCCGGTCGAGAGCTCACCCTCGCTGCCGGTG CTCGGTTTTTCTCTGCTGCTCTCGTTGGTGACGGGCGTGGTGTTCGGGATCGCTCCGGCCTGGTCGGCCTCGCGCGCTGA TCCGGCGGCGGCGTTGCGCGGCGCGGGGCGATCGGCGGCCAACCCTTCGACGCTGGCGCAGCGGCTGCTGGTAAGCGCGC AGGTGGCGCTCTCACTCGTGCTGCTGGCGGGTGCGGGATTGATGGTGCGAACACTCGGCAACCTGGAGAATCAGAACTTC GGGTTCCGACCCGAGGGGCGCGTGATTGTCAATGTCCATGCGGCCTTCAGCGGCTACGCACCGGAGAAACTGGCGGCGAT TTACCGCGAGATCGAGCGCCGCATGGGCGGAGTGCCGGGCGTGCGCAGCGCGGCGATGTCCTTGTACAGTCCTATGGAGG GCAACAACTGGTCGCGTGGAATTACGCTCGAGGACCGGGCCGACGACCCCGCGCATCCGCTCATCTCTTCCTGGGACCGC GTGAGCCCGCGTTTCTTCGAGACCATCGGTGCGCGCATTCTCCGCGGGCGCATGTTCGACGAGCGCGATACGCCCGATGC CACGCATGTCGCGGTGGTCAATCAGGAGTTCGCGGCCAGGATGTTCCCCAACCAGGACCCGATCGGCAAGCGGTTCGGCT TCGGCGGCCGCGAGCACCGCGCCGATTACACGGTTGTGGGGCTGGTGGAGAACGTGACCTTCCGCAATCCGCGCAAGGCC ACGCCTCCGCCCATGTTCTTCCTGCCGCTGCTGCAAATGTGGAAGAGTGAGTGGGACAACAACTCGATGGCGCGCTCCAA CCTGATCGGCAATATCGAACTGCGCCTGGCGGCCGGCGAGAGCGGGCTGGCCGGTGACACGCGGGCGGCACTCGCCGGAA TCGACCCGAACCTGACCGTGGTCAACGTGACTACGATCCGGGACCAACTCGACAACCTGTTGGGCCATGAACGGCTGGTT GCTCAGCTGACGGCTCTGTTCGGCGTGCTCGCGCTGCTACTGGCCACGATCGGACTATATGGCGTGACGGCCCACACGGT GGCGGGCCGCACCGGCGAGATCGGCGTCAGGATGGCGCTGGGCGCGACGCGTCCAGCGGTGGTGGGGATGATTCTTCGCG GCGTGTTCACGCAAGTGGCGTGGGGTGTCGCGATCGGCGTGCCGGCAGCGATCGCCGGCGGGCGGATTCTAGCGGGTCAG TTGTTCGGAGTGCACAGCTCCGATCCAGCGACGATGGCGGCCGTGACGCTCGCGCTGGCTGCCGCGGCACTGCTCGCCGG CTTTCTTCCGGCACTGCGGGCCAGCACCATCGATCCCGTGCGTGCGTTGCGCTCGGAATGA
Upstream 100 bases:
>100_bases CCATAGCGAAGATCTGAGATCAGGGTGCTCATTGTGAGGAGATACTGCCGCGGGCGGAAAGGGTTACGTAACCTTTTCCG TTGTCGCGAGTAACACAGAC
Downstream 100 bases:
>100_bases GTTGTCCGTCCGAGAACGATCTCTTGTGCAAGACTTGAGCGATGCGTGAGCCTGACTTCCTGAAGCTCTGGGCCGGGCAA ACCATCTCGCAGATCGGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 846; Mature: 846
Protein sequence:
>846_residues MIDTTSQDLRFTLRQLAKSKGFTLTAVMTVALAIGANTAIFTLVNAVMLKSLPVADPARLYRLGDGDNCCVIGGLQGRFS IYSYPLYEYLRDHTPEFEQMAAFQGGPAEVGVHRSGPGQINEPLVDQFVSGNYFSLFGLRPYAGRLLTPADDTRGAAPVA VMSYRVWRQQYGADPSVVGATFVIDGYPFTIAGIAPPGFFGDTMRPDPPDFWLPLSTEPAVHQKNALLDRKQDYWLYAFG RVRSGTALGALEAKVNVLMKQWMAENDPPMTAQQKQAFDRQHITLAPGGSGIQLMQAGYGSDLKLLMAVTGLVLLIACAN LANLLLARGAATRAQASIRMALGAPRARLIRQTLTEALTIAILGGAIGVFFAVVGTDALLRLTFSAARFVPVESSPSLPV LGFSLLLSLVTGVVFGIAPAWSASRADPAAALRGAGRSAANPSTLAQRLLVSAQVALSLVLLAGAGLMVRTLGNLENQNF GFRPEGRVIVNVHAAFSGYAPEKLAAIYREIERRMGGVPGVRSAAMSLYSPMEGNNWSRGITLEDRADDPAHPLISSWDR VSPRFFETIGARILRGRMFDERDTPDATHVAVVNQEFAARMFPNQDPIGKRFGFGGREHRADYTVVGLVENVTFRNPRKA TPPPMFFLPLLQMWKSEWDNNSMARSNLIGNIELRLAAGESGLAGDTRAALAGIDPNLTVVNVTTIRDQLDNLLGHERLV AQLTALFGVLALLLATIGLYGVTAHTVAGRTGEIGVRMALGATRPAVVGMILRGVFTQVAWGVAIGVPAAIAGGRILAGQ LFGVHSSDPATMAAVTLALAAAALLAGFLPALRASTIDPVRALRSE
Sequences:
>Translated_846_residues MIDTTSQDLRFTLRQLAKSKGFTLTAVMTVALAIGANTAIFTLVNAVMLKSLPVADPARLYRLGDGDNCCVIGGLQGRFS IYSYPLYEYLRDHTPEFEQMAAFQGGPAEVGVHRSGPGQINEPLVDQFVSGNYFSLFGLRPYAGRLLTPADDTRGAAPVA VMSYRVWRQQYGADPSVVGATFVIDGYPFTIAGIAPPGFFGDTMRPDPPDFWLPLSTEPAVHQKNALLDRKQDYWLYAFG RVRSGTALGALEAKVNVLMKQWMAENDPPMTAQQKQAFDRQHITLAPGGSGIQLMQAGYGSDLKLLMAVTGLVLLIACAN LANLLLARGAATRAQASIRMALGAPRARLIRQTLTEALTIAILGGAIGVFFAVVGTDALLRLTFSAARFVPVESSPSLPV LGFSLLLSLVTGVVFGIAPAWSASRADPAAALRGAGRSAANPSTLAQRLLVSAQVALSLVLLAGAGLMVRTLGNLENQNF GFRPEGRVIVNVHAAFSGYAPEKLAAIYREIERRMGGVPGVRSAAMSLYSPMEGNNWSRGITLEDRADDPAHPLISSWDR VSPRFFETIGARILRGRMFDERDTPDATHVAVVNQEFAARMFPNQDPIGKRFGFGGREHRADYTVVGLVENVTFRNPRKA TPPPMFFLPLLQMWKSEWDNNSMARSNLIGNIELRLAAGESGLAGDTRAALAGIDPNLTVVNVTTIRDQLDNLLGHERLV AQLTALFGVLALLLATIGLYGVTAHTVAGRTGEIGVRMALGATRPAVVGMILRGVFTQVAWGVAIGVPAAIAGGRILAGQ LFGVHSSDPATMAAVTLALAAAALLAGFLPALRASTIDPVRALRSE >Mature_846_residues MIDTTSQDLRFTLRQLAKSKGFTLTAVMTVALAIGANTAIFTLVNAVMLKSLPVADPARLYRLGDGDNCCVIGGLQGRFS IYSYPLYEYLRDHTPEFEQMAAFQGGPAEVGVHRSGPGQINEPLVDQFVSGNYFSLFGLRPYAGRLLTPADDTRGAAPVA VMSYRVWRQQYGADPSVVGATFVIDGYPFTIAGIAPPGFFGDTMRPDPPDFWLPLSTEPAVHQKNALLDRKQDYWLYAFG RVRSGTALGALEAKVNVLMKQWMAENDPPMTAQQKQAFDRQHITLAPGGSGIQLMQAGYGSDLKLLMAVTGLVLLIACAN LANLLLARGAATRAQASIRMALGAPRARLIRQTLTEALTIAILGGAIGVFFAVVGTDALLRLTFSAARFVPVESSPSLPV LGFSLLLSLVTGVVFGIAPAWSASRADPAAALRGAGRSAANPSTLAQRLLVSAQVALSLVLLAGAGLMVRTLGNLENQNF GFRPEGRVIVNVHAAFSGYAPEKLAAIYREIERRMGGVPGVRSAAMSLYSPMEGNNWSRGITLEDRADDPAHPLISSWDR VSPRFFETIGARILRGRMFDERDTPDATHVAVVNQEFAARMFPNQDPIGKRFGFGGREHRADYTVVGLVENVTFRNPRKA TPPPMFFLPLLQMWKSEWDNNSMARSNLIGNIELRLAAGESGLAGDTRAALAGIDPNLTVVNVTTIRDQLDNLLGHERLV AQLTALFGVLALLLATIGLYGVTAHTVAGRTGEIGVRMALGATRPAVVGMILRGVFTQVAWGVAIGVPAAIAGGRILAGQ LFGVHSSDPATMAAVTLALAAAALLAGFLPALRASTIDPVRALRSE
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1787105, Length=311, Percent_Identity=24.7588424437299, Blast_Score=73, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 90368; Mature: 90368
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDTTSQDLRFTLRQLAKSKGFTLTAVMTVALAIGANTAIFTLVNAVMLKSLPVADPARL CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHE YRLGDGDNCCVIGGLQGRFSIYSYPLYEYLRDHTPEFEQMAAFQGGPAEVGVHRSGPGQI EEECCCCCEEEEECCCCCCEEECCHHHHHHHCCCCCHHHHHHCCCCCCCCCEECCCCCCC NEPLVDQFVSGNYFSLFGLRPYAGRLLTPADDTRGAAPVAVMSYRVWRQQYGADPSVVGA CCHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEE TFVIDGYPFTIAGIAPPGFFGDTMRPDPPDFWLPLSTEPAVHQKNALLDRKQDYWLYAFG EEEECCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHCCCCCEEEEEEC RVRSGTALGALEAKVNVLMKQWMAENDPPMTAQQKQAFDRQHITLAPGGSGIQLMQAGYG CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEECCCCCCCEEEECCCC SDLKLLMAVTGLVLLIACANLANLLLARGAATRAQASIRMALGAPRARLIRQTLTEALTI CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH AILGGAIGVFFAVVGTDALLRLTFSAARFVPVESSPSLPVLGFSLLLSLVTGVVFGIAPA HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCC WSASRADPAAALRGAGRSAANPSTLAQRLLVSAQVALSLVLLAGAGLMVRTLGNLENQNF CCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCC GFRPEGRVIVNVHAAFSGYAPEKLAAIYREIERRMGGVPGVRSAAMSLYSPMEGNNWSRG CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCC ITLEDRADDPAHPLISSWDRVSPRFFETIGARILRGRMFDERDTPDATHVAVVNQEFAAR EEECCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHH MFPNQDPIGKRFGFGGREHRADYTVVGLVENVTFRNPRKATPPPMFFLPLLQMWKSEWDN HCCCCCCCCHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC NSMARSNLIGNIELRLAAGESGLAGDTRAALAGIDPNLTVVNVTTIRDQLDNLLGHERLV CCHHHHCCEEEEEEEEEECCCCCCCCCHHHEECCCCCCEEEEEHHHHHHHHHHHHHHHHH AQLTALFGVLALLLATIGLYGVTAHTVAGRTGEIGVRMALGATRPAVVGMILRGVFTQVA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH WGVAIGVPAAIAGGRILAGQLFGVHSSDPATMAAVTLALAAAALLAGFLPALRASTIDPV HHHHHCCCHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH RALRSE HHHHCC >Mature Secondary Structure MIDTTSQDLRFTLRQLAKSKGFTLTAVMTVALAIGANTAIFTLVNAVMLKSLPVADPARL CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHE YRLGDGDNCCVIGGLQGRFSIYSYPLYEYLRDHTPEFEQMAAFQGGPAEVGVHRSGPGQI EEECCCCCEEEEECCCCCCEEECCHHHHHHHCCCCCHHHHHHCCCCCCCCCEECCCCCCC NEPLVDQFVSGNYFSLFGLRPYAGRLLTPADDTRGAAPVAVMSYRVWRQQYGADPSVVGA CCHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEE TFVIDGYPFTIAGIAPPGFFGDTMRPDPPDFWLPLSTEPAVHQKNALLDRKQDYWLYAFG EEEECCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHCCCCCEEEEEEC RVRSGTALGALEAKVNVLMKQWMAENDPPMTAQQKQAFDRQHITLAPGGSGIQLMQAGYG CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEECCCCCCCEEEECCCC SDLKLLMAVTGLVLLIACANLANLLLARGAATRAQASIRMALGAPRARLIRQTLTEALTI CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH AILGGAIGVFFAVVGTDALLRLTFSAARFVPVESSPSLPVLGFSLLLSLVTGVVFGIAPA HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCC WSASRADPAAALRGAGRSAANPSTLAQRLLVSAQVALSLVLLAGAGLMVRTLGNLENQNF CCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCC GFRPEGRVIVNVHAAFSGYAPEKLAAIYREIERRMGGVPGVRSAAMSLYSPMEGNNWSRG CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCC ITLEDRADDPAHPLISSWDRVSPRFFETIGARILRGRMFDERDTPDATHVAVVNQEFAAR EEECCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHH MFPNQDPIGKRFGFGGREHRADYTVVGLVENVTFRNPRKATPPPMFFLPLLQMWKSEWDN HCCCCCCCCHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC NSMARSNLIGNIELRLAAGESGLAGDTRAALAGIDPNLTVVNVTTIRDQLDNLLGHERLV CCHHHHCCEEEEEEEEEECCCCCCCCCHHHEECCCCCCEEEEEHHHHHHHHHHHHHHHHH AQLTALFGVLALLLATIGLYGVTAHTVAGRTGEIGVRMALGATRPAVVGMILRGVFTQVA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH WGVAIGVPAAIAGGRILAGQLFGVHSSDPATMAAVTLALAAAALLAGFLPALRASTIDPV HHHHHCCCHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH RALRSE HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA