| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621806
Identifier: 116621806
GI number: 116621806
Start: 3406770
End: 3408650
Strand: Reverse
Name: 116621806
Synonym: Acid_2688
Alternate gene names: NA
Gene position: 3408650-3406770 (Counterclockwise)
Preceding gene: 116621809
Following gene: 116621801
Centisome position: 34.2
GC content: 57.42
Gene sequence:
>1881_bases ATGATTGGCCCGTTGTGGGTGCTGCTGATCGGCTTAGTTTCGGCAGGCGTATTCTGGCTGCCATACTATGTTCCAGCCTC GTCTAGAATCGTTTCGGACTCGTTGCGATTTGGCTTCAACAACCACGTTGCGCTGACCTCCGTTTTCTTGGGACTCGCGG CGGCCACGATCCTCGCGACGTTTTCGCCGCAGGCTTCCCGGACCAATTCAATTCCCGCGACCGACGGGCAGATCGGGATC ACTTCGCTGGTCGTTGTCTGCTTAATCCAGACCGCGGCTTTCGTGCCGCTGTATTGGCTCGCGAATGGAAATACCCCAAT CGGCGAAGCAGCGTACTTCCTGCCGAGGCTCTACTACATGGACCAGGGCCTTCCCCCTTATCGCGGCTTTGAGTTTGCCT ACGGTCCAGCGCTGGCTTACGGACCTTACCTGGCGCAGCGGCTGCTGGGAGTTTCCCCTCAGGCGGCTTATACCTGGAGC GTCTGGGCCTTCGGGATCGCCGGGTATGGCATCTTGTGGGCTATCCTGCGACAGGCGAAGACCAGCCGCTTTACGAAACT CGCCGCATTTGCCGGCCTTGCCGCCTGCTTCCATATCATGATCGCGCCGCAGTATACATTGCTGCGTTTTCTATGTGGAA TCGGCGCGCTGGTTCTGGTCGGGAAGATCACCCAAGACCTGCGAGCCGGTTGGTTTGTACTTCCCGTGATTTATCTCGGG CTCACACTGGGAGTATTCGCGATCTCGCCGGAAATTGGATGCGCGTTCATCCCCGGCATTCTGGCCTATCTGCTCTTAAA GTTTGGTTTCGGTGCAGAGGTTGTGCGGGTCGCGGGCATGTACCTGCTGCTGATCATCCTTGTTGCGCTGCTCATTCCAA CAGAAATGCTTCTCACTCTTCGCGGATTTGCCGCGGGAGGGAATTCGTTCCCGGTGATGCCATCGCCCTACATGCTCCTA TACCTGGCGACGCTTTTTGCAGTGGTACCTCAATTGTTAGGGCGCGGACTCTCGCTCTTGACAGGACGCCGAGCCAAGCC AGGGCCTGATGGACCGTTTGGCGATCCGGTGACGATCGCGATTGGCGTTACCTCGGTGTGCATGATTCCGGGCGCCCTGG GGAGGGCGGACCTGGGCCACGTTTACTTCTACGGAATCGGTGTACTCCTGCTTGGAATACTCGGGAGTTGGCGTTCCCGC AAATGGCAATTGGCGTACTGCAGCGCACTCGTCATCGCATTCCAGGTGGTCGGTTTCGTCTTGTCCTTTCATTTCCTGTC TTCGGATTATCTATCCGCGGCCGGACAGAAAATGTTGCGTTGGGTCGAGGATCACCCGCAGTCATCAGTCTCAGAGTACG CCAAGTCGATTGTGGGAGAAGCTCGCTGGGCGGCGGCATTCGATCGAGCGCGACATACTCGGGATGTCAGCCTGGAGACT AACTATGCAGTGCTGGCCGGTATCGGCCCCATTTGTGCGAACCCGGGTGATCGCGCCGCTTTTGCCGTGCTTGCGCAACA CAAGAATCTTAAGCCGCAATATTTCTTTGACTCTTTGAACGTTTTTACGGTCGAGCAGAGGCAGCGCATGCGTGCTGATT ATCAAGAGTGCCGCTACCTGATCCAGCCTTTCGGGTCCGAAGACAATTCGGTTTCCGCACACGACACGAGGAATGCGGAG GTCGATGCGGGGTGGGAGGGATATCGCCGCTACATCGCCTGGAATCTCTGCTTTCCGTGGTTGCCTCGTCTCAAACCGGT TGCAGAGCCCCCGGTGCCTGGCGAAACCTCCGGACGACCAGATTTCGTTGTACTCAAGCGAGTCAATGAACGCTGGTTCC TGTGGGCCAGGCGAGACACACTGCAAAGCAAATCCGAATAG
Upstream 100 bases:
>100_bases GTACGATCGAGTGGAGATGGAATGCTATCGGGCCGGGATCTGCCGGCCCAGTTAGGCTACGATCAGACTTGTGGACTTCC ACTCCACATCTCTCCGCCGG
Downstream 100 bases:
>100_bases AAAGTGGCCTATTTCGCCCGTGTCACATCGATCTTAGCCTTCATGGTCTGGCCGTCGCGGGACATTTGCGCTTCTCCCGT AATCCGTTCCGCAGCCAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 626; Mature: 626
Protein sequence:
>626_residues MIGPLWVLLIGLVSAGVFWLPYYVPASSRIVSDSLRFGFNNHVALTSVFLGLAAATILATFSPQASRTNSIPATDGQIGI TSLVVVCLIQTAAFVPLYWLANGNTPIGEAAYFLPRLYYMDQGLPPYRGFEFAYGPALAYGPYLAQRLLGVSPQAAYTWS VWAFGIAGYGILWAILRQAKTSRFTKLAAFAGLAACFHIMIAPQYTLLRFLCGIGALVLVGKITQDLRAGWFVLPVIYLG LTLGVFAISPEIGCAFIPGILAYLLLKFGFGAEVVRVAGMYLLLIILVALLIPTEMLLTLRGFAAGGNSFPVMPSPYMLL YLATLFAVVPQLLGRGLSLLTGRRAKPGPDGPFGDPVTIAIGVTSVCMIPGALGRADLGHVYFYGIGVLLLGILGSWRSR KWQLAYCSALVIAFQVVGFVLSFHFLSSDYLSAAGQKMLRWVEDHPQSSVSEYAKSIVGEARWAAAFDRARHTRDVSLET NYAVLAGIGPICANPGDRAAFAVLAQHKNLKPQYFFDSLNVFTVEQRQRMRADYQECRYLIQPFGSEDNSVSAHDTRNAE VDAGWEGYRRYIAWNLCFPWLPRLKPVAEPPVPGETSGRPDFVVLKRVNERWFLWARRDTLQSKSE
Sequences:
>Translated_626_residues MIGPLWVLLIGLVSAGVFWLPYYVPASSRIVSDSLRFGFNNHVALTSVFLGLAAATILATFSPQASRTNSIPATDGQIGI TSLVVVCLIQTAAFVPLYWLANGNTPIGEAAYFLPRLYYMDQGLPPYRGFEFAYGPALAYGPYLAQRLLGVSPQAAYTWS VWAFGIAGYGILWAILRQAKTSRFTKLAAFAGLAACFHIMIAPQYTLLRFLCGIGALVLVGKITQDLRAGWFVLPVIYLG LTLGVFAISPEIGCAFIPGILAYLLLKFGFGAEVVRVAGMYLLLIILVALLIPTEMLLTLRGFAAGGNSFPVMPSPYMLL YLATLFAVVPQLLGRGLSLLTGRRAKPGPDGPFGDPVTIAIGVTSVCMIPGALGRADLGHVYFYGIGVLLLGILGSWRSR KWQLAYCSALVIAFQVVGFVLSFHFLSSDYLSAAGQKMLRWVEDHPQSSVSEYAKSIVGEARWAAAFDRARHTRDVSLET NYAVLAGIGPICANPGDRAAFAVLAQHKNLKPQYFFDSLNVFTVEQRQRMRADYQECRYLIQPFGSEDNSVSAHDTRNAE VDAGWEGYRRYIAWNLCFPWLPRLKPVAEPPVPGETSGRPDFVVLKRVNERWFLWARRDTLQSKSE >Mature_626_residues MIGPLWVLLIGLVSAGVFWLPYYVPASSRIVSDSLRFGFNNHVALTSVFLGLAAATILATFSPQASRTNSIPATDGQIGI TSLVVVCLIQTAAFVPLYWLANGNTPIGEAAYFLPRLYYMDQGLPPYRGFEFAYGPALAYGPYLAQRLLGVSPQAAYTWS VWAFGIAGYGILWAILRQAKTSRFTKLAAFAGLAACFHIMIAPQYTLLRFLCGIGALVLVGKITQDLRAGWFVLPVIYLG LTLGVFAISPEIGCAFIPGILAYLLLKFGFGAEVVRVAGMYLLLIILVALLIPTEMLLTLRGFAAGGNSFPVMPSPYMLL YLATLFAVVPQLLGRGLSLLTGRRAKPGPDGPFGDPVTIAIGVTSVCMIPGALGRADLGHVYFYGIGVLLLGILGSWRSR KWQLAYCSALVIAFQVVGFVLSFHFLSSDYLSAAGQKMLRWVEDHPQSSVSEYAKSIVGEARWAAAFDRARHTRDVSLET NYAVLAGIGPICANPGDRAAFAVLAQHKNLKPQYFFDSLNVFTVEQRQRMRADYQECRYLIQPFGSEDNSVSAHDTRNAE VDAGWEGYRRYIAWNLCFPWLPRLKPVAEPPVPGETSGRPDFVVLKRVNERWFLWARRDTLQSKSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68678; Mature: 68678
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGPLWVLLIGLVSAGVFWLPYYVPASSRIVSDSLRFGFNNHVALTSVFLGLAAATILAT CCCHHHHHHHHHHHCCHHHHHEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH FSPQASRTNSIPATDGQIGITSLVVVCLIQTAAFVPLYWLANGNTPIGEAAYFLPRLYYM CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHHH DQGLPPYRGFEFAYGPALAYGPYLAQRLLGVSPQAAYTWSVWAFGIAGYGILWAILRQAK CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHH TSRFTKLAAFAGLAACFHIMIAPQYTLLRFLCGIGALVLVGKITQDLRAGWFVLPVIYLG HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH LTLGVFAISPEIGCAFIPGILAYLLLKFGFGAEVVRVAGMYLLLIILVALLIPTEMLLTL HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGFAAGGNSFPVMPSPYMLLYLATLFAVVPQLLGRGLSLLTGRRAKPGPDGPFGDPVTIA HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCEEEE IGVTSVCMIPGALGRADLGHVYFYGIGVLLLGILGSWRSRKWQLAYCSALVIAFQVVGFV EHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH LSFHFLSSDYLSAAGQKMLRWVEDHPQSSVSEYAKSIVGEARWAAAFDRARHTRDVSLET HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECC NYAVLAGIGPICANPGDRAAFAVLAQHKNLKPQYFFDSLNVFTVEQRQRMRADYQECRYL CEEEEECCCHHHCCCCCHHHHHHHHHCCCCCCHHHHCCCCEEEHHHHHHHHCCHHHHHHH IQPFGSEDNSVSAHDTRNAEVDAGWEGYRRYIAWNLCFPWLPRLKPVAEPPVPGETSGRP HHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC DFVVLKRVNERWFLWARRDTLQSKSE CEEEEEECCCCEEEEEEHHHHCCCCC >Mature Secondary Structure MIGPLWVLLIGLVSAGVFWLPYYVPASSRIVSDSLRFGFNNHVALTSVFLGLAAATILAT CCCHHHHHHHHHHHCCHHHHHEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH FSPQASRTNSIPATDGQIGITSLVVVCLIQTAAFVPLYWLANGNTPIGEAAYFLPRLYYM CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHHH DQGLPPYRGFEFAYGPALAYGPYLAQRLLGVSPQAAYTWSVWAFGIAGYGILWAILRQAK CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHH TSRFTKLAAFAGLAACFHIMIAPQYTLLRFLCGIGALVLVGKITQDLRAGWFVLPVIYLG HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH LTLGVFAISPEIGCAFIPGILAYLLLKFGFGAEVVRVAGMYLLLIILVALLIPTEMLLTL HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGFAAGGNSFPVMPSPYMLLYLATLFAVVPQLLGRGLSLLTGRRAKPGPDGPFGDPVTIA HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCEEEE IGVTSVCMIPGALGRADLGHVYFYGIGVLLLGILGSWRSRKWQLAYCSALVIAFQVVGFV EHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH LSFHFLSSDYLSAAGQKMLRWVEDHPQSSVSEYAKSIVGEARWAAAFDRARHTRDVSLET HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECC NYAVLAGIGPICANPGDRAAFAVLAQHKNLKPQYFFDSLNVFTVEQRQRMRADYQECRYL CEEEEECCCHHHCCCCCHHHHHHHHHCCCCCCHHHHCCCCEEEHHHHHHHHCCHHHHHHH IQPFGSEDNSVSAHDTRNAEVDAGWEGYRRYIAWNLCFPWLPRLKPVAEPPVPGETSGRP HHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC DFVVLKRVNERWFLWARRDTLQSKSE CEEEEEECCCCEEEEEEHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA