| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621673
Identifier: 116621673
GI number: 116621673
Start: 3233864
End: 3235675
Strand: Direct
Name: 116621673
Synonym: Acid_2555
Alternate gene names: NA
Gene position: 3233864-3235675 (Clockwise)
Preceding gene: 116621672
Following gene: 116621674
Centisome position: 32.45
GC content: 64.79
Gene sequence:
>1812_bases ATGACGCGCCGCCTTGCCGCTTTCCTGATGTGCGGGTCGATCGCTTTCGGCCAACGCCCCCGAGCGGCGACAGCTACGCT CGATCCGGCCATGAGGTACGTCGATTTTCTTGCCGTGGATGCGGCGGGGCGGCCTGTTGCGGACCTGTCAGCCGCGGACC TCGAACTCGTGCAGGCCGGGGAACCGCGGAAGGTCACGCAATTGACCTGGTTCGACGCGCTTCGACACACCGCGCACGGG GAATCCAGTCTCAATCTCGAGCCCGATGACTTCCACCGGAATTTCATCGCGATCGTGGATGACCTCGGCCTGCCGGCGGA TGGAATTGCGGCTGTCAAGGACTCGCTGGGCGGCTTCGTTAAGGACCAAATGGCATCGGGCGACCGAATGGCGGTGCTGC GCACGAGCTACGGCAGCGGTGTCTTGCAGCAGTTGACCGACGACCGGCGCATCCTGACACAGGCAATCGACGCCATCGAT TTCCTGGGCGGCGGTACCGGAGCGGATGCCGCTGCCGGTGCAAGCTGGCTGGCCCTGCGGCACGCACTGCAAGGGCTGCA GGAGCCGCCGGGTCGCAAGTTTGTGGTGCTGTTCTCGCAGAACCTGAATGCCGCAGGCGCTCAGGACATGGTTGCCAGCA GTCTCTCGGGCGAAGCCAACACGGCGATGGCCGTGGTATACGCCGTAGACCCGAGGGGGCCTATGCGCGCTGAGTCCGCG GCGAAAGGCTCGCCGCTGGAAAAGCTGGTACGCGAGACGGGCGGAGTTTTCGGCGCCGAGCTTTCCGGCGTGCTGCAGGC GGAGCAAGGTTTCTATTCCCTGGCGTTCGAGGAACCCGCCGGAGAGCTGACCGCGCCGAAGACGGGTGACGACCCGGTGG AATTGAAGACCCGGCGCGCGGGTGTGACACTGCGGGCGCGCATACGCGCCGTCGCGGTACACGCGCGTGAGGATTTTCCG GTGGCTGTCGCACGCGGACTCCAGATCCGGCGTGCGCTGGCATCGCCTTTCGTGGGCGCCGATATTCGTACACGCATGAC GGCGAGCTTCGGCGGCTTCGCCGGACAGAACGCCACTTTGAATGTCGGCGTTCTGATTGATGCCCGCGACCTTGGAATGA TCCGTGACGCCAAGGGCCTGAGCCGCGGATCGCTGCGGATGACGGTGGACGCGCGCTCCGACCTGGGAGCGGAGGCGCTG CCGGCTGAGCGCTCCTACGATCTGGCGCTGACCCAGGATACTTACCAGCGCGCGCTGCTCGAGGGGTTTTTGTATGTGGT CACGCTTCGTCTGCCCGGGGCGGGAGCCTGGCGGATTCAGGCGGTGGTGGCCGATGGCGTGACCGACCGCCTGGGCACGG TGATGGAATCGGTGGAAGTGCCCGCGCGGAACGAGATTTCGCTATCCGGCCTGAGTTTGCGCGTATACGATCCGGGCGGT CCGGGCAAGCAATCCCTGGATCCGCCGCTTGATCCGCGGGAGAACGAAGCAGAACGCATTTTCCAGAAGGGCCGCACGCT GCAGATCACTTATACCGTCTTCAACCCACTGGTGGATGACAAGAAGCAGGTGCATGTCGAAGTCAAGACCATGGTTTATG CGCGCGGCCAGACCGTGTTCGGCGGGACCCCTTCGGAGGTGAGTTATCCGGTTGACCAGGGTATGCACCGCCAGGTGTAC TCGCGGATCGCGCTGGCTTCCTCCATCGCGGCCGGCGATTACATTCTGGAGGTGAGCGTAGTGGATAAGACTGCGCCGCC CGGCGCGCCGCGGACCGCCAGCCGCTTCATCGATTTCCATCTACGCGACTGA
Upstream 100 bases:
>100_bases ATGTCCGGTTCGACGAGGGGAGGGGCACTTTGCGGTCCCCTCCTACTCTACCGGCTCGGTGGGGTTGCGGGCGGCGCGCG GGGAACTACACTGATAGGGA
Downstream 100 bases:
>100_bases AGGCGCCGGCGGGTTAAGATGGCCTTCATGCCGCTGCGTGCCACGCTGGAGGAGTACTTTGAATTCAAGCCGCTCGGCGC CGAGTGGAAGACCGAGATAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 603; Mature: 602
Protein sequence:
>603_residues MTRRLAAFLMCGSIAFGQRPRAATATLDPAMRYVDFLAVDAAGRPVADLSAADLELVQAGEPRKVTQLTWFDALRHTAHG ESSLNLEPDDFHRNFIAIVDDLGLPADGIAAVKDSLGGFVKDQMASGDRMAVLRTSYGSGVLQQLTDDRRILTQAIDAID FLGGGTGADAAAGASWLALRHALQGLQEPPGRKFVVLFSQNLNAAGAQDMVASSLSGEANTAMAVVYAVDPRGPMRAESA AKGSPLEKLVRETGGVFGAELSGVLQAEQGFYSLAFEEPAGELTAPKTGDDPVELKTRRAGVTLRARIRAVAVHAREDFP VAVARGLQIRRALASPFVGADIRTRMTASFGGFAGQNATLNVGVLIDARDLGMIRDAKGLSRGSLRMTVDARSDLGAEAL PAERSYDLALTQDTYQRALLEGFLYVVTLRLPGAGAWRIQAVVADGVTDRLGTVMESVEVPARNEISLSGLSLRVYDPGG PGKQSLDPPLDPRENEAERIFQKGRTLQITYTVFNPLVDDKKQVHVEVKTMVYARGQTVFGGTPSEVSYPVDQGMHRQVY SRIALASSIAAGDYILEVSVVDKTAPPGAPRTASRFIDFHLRD
Sequences:
>Translated_603_residues MTRRLAAFLMCGSIAFGQRPRAATATLDPAMRYVDFLAVDAAGRPVADLSAADLELVQAGEPRKVTQLTWFDALRHTAHG ESSLNLEPDDFHRNFIAIVDDLGLPADGIAAVKDSLGGFVKDQMASGDRMAVLRTSYGSGVLQQLTDDRRILTQAIDAID FLGGGTGADAAAGASWLALRHALQGLQEPPGRKFVVLFSQNLNAAGAQDMVASSLSGEANTAMAVVYAVDPRGPMRAESA AKGSPLEKLVRETGGVFGAELSGVLQAEQGFYSLAFEEPAGELTAPKTGDDPVELKTRRAGVTLRARIRAVAVHAREDFP VAVARGLQIRRALASPFVGADIRTRMTASFGGFAGQNATLNVGVLIDARDLGMIRDAKGLSRGSLRMTVDARSDLGAEAL PAERSYDLALTQDTYQRALLEGFLYVVTLRLPGAGAWRIQAVVADGVTDRLGTVMESVEVPARNEISLSGLSLRVYDPGG PGKQSLDPPLDPRENEAERIFQKGRTLQITYTVFNPLVDDKKQVHVEVKTMVYARGQTVFGGTPSEVSYPVDQGMHRQVY SRIALASSIAAGDYILEVSVVDKTAPPGAPRTASRFIDFHLRD >Mature_602_residues TRRLAAFLMCGSIAFGQRPRAATATLDPAMRYVDFLAVDAAGRPVADLSAADLELVQAGEPRKVTQLTWFDALRHTAHGE SSLNLEPDDFHRNFIAIVDDLGLPADGIAAVKDSLGGFVKDQMASGDRMAVLRTSYGSGVLQQLTDDRRILTQAIDAIDF LGGGTGADAAAGASWLALRHALQGLQEPPGRKFVVLFSQNLNAAGAQDMVASSLSGEANTAMAVVYAVDPRGPMRAESAA KGSPLEKLVRETGGVFGAELSGVLQAEQGFYSLAFEEPAGELTAPKTGDDPVELKTRRAGVTLRARIRAVAVHAREDFPV AVARGLQIRRALASPFVGADIRTRMTASFGGFAGQNATLNVGVLIDARDLGMIRDAKGLSRGSLRMTVDARSDLGAEALP AERSYDLALTQDTYQRALLEGFLYVVTLRLPGAGAWRIQAVVADGVTDRLGTVMESVEVPARNEISLSGLSLRVYDPGGP GKQSLDPPLDPRENEAERIFQKGRTLQITYTVFNPLVDDKKQVHVEVKTMVYARGQTVFGGTPSEVSYPVDQGMHRQVYS RIALASSIAAGDYILEVSVVDKTAPPGAPRTASRFIDFHLRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64476; Mature: 64345
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRRLAAFLMCGSIAFGQRPRAATATLDPAMRYVDFLAVDAAGRPVADLSAADLELVQAG CCHHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHCCCC EPRKVTQLTWFDALRHTAHGESSLNLEPDDFHRNFIAIVDDLGLPADGIAAVKDSLGGFV CCCCEEEHHHHHHHHHHCCCCCCCCCCCHHHCCCEEEEEECCCCCCCHHHHHHHHHCCHH KDQMASGDRMAVLRTSYGSGVLQQLTDDRRILTQAIDAIDFLGGGTGADAAAGASWLALR HHHHCCCCEEEEEEECCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHCCHHHHHHH HALQGLQEPPGRKFVVLFSQNLNAAGAQDMVASSLSGEANTAMAVVYAVDPRGPMRAESA HHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCC AKGSPLEKLVRETGGVFGAELSGVLQAEQGFYSLAFEEPAGELTAPKTGDDPVELKTRRA CCCCHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCEEEHHHC GVTLRARIRAVAVHAREDFPVAVARGLQIRRALASPFVGADIRTRMTASFGGFAGQNATL CEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCEE NVGVLIDARDLGMIRDAKGLSRGSLRMTVDARSDLGAEALPAERSYDLALTQDTYQRALL EEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECHHHHHHHHH EGFLYVVTLRLPGAGAWRIQAVVADGVTDRLGTVMESVEVPARNEISLSGLSLRVYDPGG HHEEEEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCEEECCEEEEEECCCC PGKQSLDPPLDPRENEAERIFQKGRTLQITYTVFNPLVDDKKQVHVEVKTMVYARGQTVF CCCCCCCCCCCCCCCHHHHHHHCCCEEEEEEEEECCCCCCCCEEEEEEEEEEEECCCEEE GGTPSEVSYPVDQGMHRQVYSRIALASSIAAGDYILEVSVVDKTAPPGAPRTASRFIDFH CCCCCCCCCCHHCCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCHHHEEEEE LRD ECC >Mature Secondary Structure TRRLAAFLMCGSIAFGQRPRAATATLDPAMRYVDFLAVDAAGRPVADLSAADLELVQAG CHHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHCCCC EPRKVTQLTWFDALRHTAHGESSLNLEPDDFHRNFIAIVDDLGLPADGIAAVKDSLGGFV CCCCEEEHHHHHHHHHHCCCCCCCCCCCHHHCCCEEEEEECCCCCCCHHHHHHHHHCCHH KDQMASGDRMAVLRTSYGSGVLQQLTDDRRILTQAIDAIDFLGGGTGADAAAGASWLALR HHHHCCCCEEEEEEECCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHCCHHHHHHH HALQGLQEPPGRKFVVLFSQNLNAAGAQDMVASSLSGEANTAMAVVYAVDPRGPMRAESA HHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCC AKGSPLEKLVRETGGVFGAELSGVLQAEQGFYSLAFEEPAGELTAPKTGDDPVELKTRRA CCCCHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCEEEHHHC GVTLRARIRAVAVHAREDFPVAVARGLQIRRALASPFVGADIRTRMTASFGGFAGQNATL CEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCEE NVGVLIDARDLGMIRDAKGLSRGSLRMTVDARSDLGAEALPAERSYDLALTQDTYQRALL EEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECHHHHHHHHH EGFLYVVTLRLPGAGAWRIQAVVADGVTDRLGTVMESVEVPARNEISLSGLSLRVYDPGG HHEEEEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCEEECCEEEEEECCCC PGKQSLDPPLDPRENEAERIFQKGRTLQITYTVFNPLVDDKKQVHVEVKTMVYARGQTVF CCCCCCCCCCCCCCCHHHHHHHCCCEEEEEEEEECCCCCCCCEEEEEEEEEEEECCCEEE GGTPSEVSYPVDQGMHRQVYSRIALASSIAAGDYILEVSVVDKTAPPGAPRTASRFIDFH CCCCCCCCCCHHCCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCHHHEEEEE LRD ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA