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The map label for this gene is 116621645

Identifier: 116621645

GI number: 116621645

Start: 3205565

End: 3206839

Strand: Direct

Name: 116621645

Synonym: Acid_2527

Alternate gene names: NA

Gene position: 3205565-3206839 (Clockwise)

Preceding gene: 116621644

Following gene: 116621648

Centisome position: 32.17

GC content: 59.29

Gene sequence:

>1275_bases
ATGGCAGGATGGCCACGAAGCGAAGCGCGGAAGAGGTCCAACGCCTGTTGGATGAATACCGTCAGGGCGGCGAGGGGCGC
ACGGCATTCTGTCGACGGCTGGCATTCCTGTCACCACCCTGAATTACTATCTTCGCCGCCAAGCTCTCCAGGCACGACCA
CGACTCGCTCGAGTCAAGCTCGCTACACCGGCAGCGACATGACCTCGGCCACTAATCCGGAGAATGGGACGGTCACCTAC
CAATACGATGGCTCGCACCATGTCACCAAGCGGACCGACGCGCTCGGCCAGGAGACCCGCTACACCTACGACAATTACAA
CCGGCTGACCGAGGTGCAGCATTGGGCCACATCGTGGGATCCCTTCAGCAATAGCATGCAATTCCAGGAGCAGACCGCGC
AGCGGGTGGATTACTATTACGACAGCAATCCGATCAACGGGAGCTACTCGCAGTACGCGCAGGGCCGGCTGGCGGCGGTG
ACGTTCACCGATGAGAGCCCGAGGTTGGGGGTGAATTACCAGTACAGCTACAATCAGGCAGGCCGGGTGACGTCGCAGCA
CATGGATTACTATGGCGGCGCGCACGTGTTCGACGCGTCGTACACTTGGGATAATGAAGGCCGGATGACGGGGACCAATT
ACGGTCCGCAGTATAGCCTGCAGTATGATGTCAATGGGCGGTTGAGCGGGATGCAGGACGCGGCCAATGGGAACACAACG
GTGGCGACGGCGAACTACGGCGTGGCTGGCGAGATGCTGGGACTGAGTTACTTCGGATACAGCGAGACGCGGACTTACAA
CAGTCTCCTGCAAATGACGCGGCAGACCGTCAGCGGGATGATGGACATGCAGTATGTCTATCAGAACGGGCAAAACAACG
GCCGCATTGTGCAAGCCATCGACGGCATCGCGAACGAAAGCGTGAACTATACGTACGACCCGTTAAATCGGCTCTCGACG
GCCAATGCGACGAACGGAAGTTGGGGCCAGGCTTTCACCTACGACGGCTTCGGGAACCTGACGGGAAAGAGCGTGACGCA
GGGCAGCGCGCCGGCGCTGAGCGTGTCGTACGACCCGGCGACGAACCACCAGACAGGCCAGAGTTACGATGCGAATGGGA
ACCTGTCCGGGTACCTGGTATCGTACGATATCGAAAATCGGATGATCGCCGACGCCGCGGCGACGTACGGATACGATCAT
GCGGGGAAGCGGATTTCGAAGATCACGAGCAATTCGACGGAGATCTACTTCTACGGGATCAGCGTAAGCGTCTAG

Upstream 100 bases:

>100_bases
CCAGGTGAGGACAAGAAGCGGCCCCATCCGTACACGAGCTGGGATCAAGCGTAAGCGTCTGACCAAGCCGTCTTGAGTCG
CCGTTTCGGAAATTGATGAG

Downstream 100 bases:

>100_bases
CGAACCCGTGTTGACATCATCGGCGCGAAGCAGACCAGCGCGCGGGCGTTAGGTGGGCAACCTCAGCTAACGTACGGTGC
TCCAAACCAGGGAGCATGCC

Product: YD repeat-containing protein

Products: NA

Alternate protein names: YD Repeat Protein; YD Repeat-Containing Protein; RhsD Protein; Rhs-Related Protein

Number of amino acids: Translated: 424; Mature: 423

Protein sequence:

>424_residues
MAGWPRSEARKRSNACWMNTVRAARGARHSVDGWHSCHHPELLSSPPSSPGTTTTRSSQARYTGSDMTSATNPENGTVTY
QYDGSHHVTKRTDALGQETRYTYDNYNRLTEVQHWATSWDPFSNSMQFQEQTAQRVDYYYDSNPINGSYSQYAQGRLAAV
TFTDESPRLGVNYQYSYNQAGRVTSQHMDYYGGAHVFDASYTWDNEGRMTGTNYGPQYSLQYDVNGRLSGMQDAANGNTT
VATANYGVAGEMLGLSYFGYSETRTYNSLLQMTRQTVSGMMDMQYVYQNGQNNGRIVQAIDGIANESVNYTYDPLNRLST
ANATNGSWGQAFTYDGFGNLTGKSVTQGSAPALSVSYDPATNHQTGQSYDANGNLSGYLVSYDIENRMIADAAATYGYDH
AGKRISKITSNSTEIYFYGISVSV

Sequences:

>Translated_424_residues
MAGWPRSEARKRSNACWMNTVRAARGARHSVDGWHSCHHPELLSSPPSSPGTTTTRSSQARYTGSDMTSATNPENGTVTY
QYDGSHHVTKRTDALGQETRYTYDNYNRLTEVQHWATSWDPFSNSMQFQEQTAQRVDYYYDSNPINGSYSQYAQGRLAAV
TFTDESPRLGVNYQYSYNQAGRVTSQHMDYYGGAHVFDASYTWDNEGRMTGTNYGPQYSLQYDVNGRLSGMQDAANGNTT
VATANYGVAGEMLGLSYFGYSETRTYNSLLQMTRQTVSGMMDMQYVYQNGQNNGRIVQAIDGIANESVNYTYDPLNRLST
ANATNGSWGQAFTYDGFGNLTGKSVTQGSAPALSVSYDPATNHQTGQSYDANGNLSGYLVSYDIENRMIADAAATYGYDH
AGKRISKITSNSTEIYFYGISVSV
>Mature_423_residues
AGWPRSEARKRSNACWMNTVRAARGARHSVDGWHSCHHPELLSSPPSSPGTTTTRSSQARYTGSDMTSATNPENGTVTYQ
YDGSHHVTKRTDALGQETRYTYDNYNRLTEVQHWATSWDPFSNSMQFQEQTAQRVDYYYDSNPINGSYSQYAQGRLAAVT
FTDESPRLGVNYQYSYNQAGRVTSQHMDYYGGAHVFDASYTWDNEGRMTGTNYGPQYSLQYDVNGRLSGMQDAANGNTTV
ATANYGVAGEMLGLSYFGYSETRTYNSLLQMTRQTVSGMMDMQYVYQNGQNNGRIVQAIDGIANESVNYTYDPLNRLSTA
NATNGSWGQAFTYDGFGNLTGKSVTQGSAPALSVSYDPATNHQTGQSYDANGNLSGYLVSYDIENRMIADAAATYGYDHA
GKRISKITSNSTEIYFYGISVSV

Specific function: Unknown

COG id: COG3209

COG function: function code M; Rhs family protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46928; Mature: 46797

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGWPRSEARKRSNACWMNTVRAARGARHSVDGWHSCHHPELLSSPPSSPGTTTTRSSQA
CCCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCC
RYTGSDMTSATNPENGTVTYQYDGSHHVTKRTDALGQETRYTYDNYNRLTEVQHWATSWD
EECCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHCCCCCCEEECCHHHHHHHHHHHCCCC
PFSNSMQFQEQTAQRVDYYYDSNPINGSYSQYAQGRLAAVTFTDESPRLGVNYQYSYNQA
CCCCCHHHHHHHHHHHCEEECCCCCCCCHHHHCCCEEEEEEEECCCCCCCEEEEECCCCC
GRVTSQHMDYYGGAHVFDASYTWDNEGRMTGTNYGPQYSLQYDVNGRLSGMQDAANGNTT
CCCHHHHHHHCCCEEEEECEEEECCCCCEECCCCCCEEEEEEECCCCCCCCCCCCCCCEE
VATANYGVAGEMLGLSYFGYSETRTYNSLLQMTRQTVSGMMDMQYVYQNGQNNGRIVQAI
EEEECCCCCHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
DGIANESVNYTYDPLNRLSTANATNGSWGQAFTYDGFGNLTGKSVTQGSAPALSVSYDPA
HHHCCCCCCEEECHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCC
TNHQTGQSYDANGNLSGYLVSYDIENRMIADAAATYGYDHAGKRISKITSNSTEIYFYGI
CCCCCCCCCCCCCCCEEEEEEEECCCCEEHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEE
SVSV
EEEC
>Mature Secondary Structure 
AGWPRSEARKRSNACWMNTVRAARGARHSVDGWHSCHHPELLSSPPSSPGTTTTRSSQA
CCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCC
RYTGSDMTSATNPENGTVTYQYDGSHHVTKRTDALGQETRYTYDNYNRLTEVQHWATSWD
EECCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHCCCCCCEEECCHHHHHHHHHHHCCCC
PFSNSMQFQEQTAQRVDYYYDSNPINGSYSQYAQGRLAAVTFTDESPRLGVNYQYSYNQA
CCCCCHHHHHHHHHHHCEEECCCCCCCCHHHHCCCEEEEEEEECCCCCCCEEEEECCCCC
GRVTSQHMDYYGGAHVFDASYTWDNEGRMTGTNYGPQYSLQYDVNGRLSGMQDAANGNTT
CCCHHHHHHHCCCEEEEECEEEECCCCCEECCCCCCEEEEEEECCCCCCCCCCCCCCCEE
VATANYGVAGEMLGLSYFGYSETRTYNSLLQMTRQTVSGMMDMQYVYQNGQNNGRIVQAI
EEEECCCCCHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
DGIANESVNYTYDPLNRLSTANATNGSWGQAFTYDGFGNLTGKSVTQGSAPALSVSYDPA
HHHCCCCCCEEECHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCC
TNHQTGQSYDANGNLSGYLVSYDIENRMIADAAATYGYDHAGKRISKITSNSTEIYFYGI
CCCCCCCCCCCCCCCEEEEEEEECCCCEEHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEE
SVSV
EEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA