| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621648
Identifier: 116621648
GI number: 116621648
Start: 3209131
End: 3209979
Strand: Direct
Name: 116621648
Synonym: Acid_2530
Alternate gene names: NA
Gene position: 3209131-3209979 (Clockwise)
Preceding gene: 116621645
Following gene: 116621649
Centisome position: 32.2
GC content: 57.48
Gene sequence:
>849_bases GTGGACATCCCGCCATCTCATCAATTTCGGGGAAAGGCGATTCAAGACGGGTTGGTCAGACGCTTACGGATCAGCGGGCA GAAACTGGCGACGAAGACGTGTACGAGCACTGGATGTCCGATCGCCTACAACGTGTACTTCGGTGGGAAGCTGGTCAGGA GCAAGGGCGTGGTGGTGGTGACCGACCGCCTCGGCAGTGTCCGCGCTAACTCCAATGGTGAGTTCATGTCGTACTACCCG TATGGCGAGGAACGGACGTCCACCGCCGACAATCGAGAGAAGTTCGGCACCTACACGCGGGATAATGTGACACAGGATTA CGCGGACCAACGATACTACGCGGTGGGGATGGGAAGGTTCAATTCGGCGGACCCGAGTGGCATGAAATCGGTGCACCCTC AGAATCCCTCTAGTTGGAATCTACTTTCGTACGGACTAAACGACCCGATTGGTCTTAATGACCCGCGCGGGTTGAACGCC GACAGTTGCGATGCCGCGAACCCCGACGAAGACTGCTTCGAGGAGAATTGCGATGCCGATGTGAGCTGCGTCGACACGAG CGAAGATGGCGGCGGGGGAGGCGATGACGGCGCGGACGATGGATGCAACTGGGATTCCACAACGAGTACGCTTTCATGCC CTTCAAGTCCTGTTGTGCTGATGGGTGCAAATGATATCCAATCGATACAATCTTGGTACCGGAACCTTCTTGAGCACCTG GACAAGATAGCGCAGGAGCCGGGTAGCCAAGCGGTCGACCATTGGCAAGGCGAGGTTCGGGAGTTTACACGTAGGATCTT AAGCAGAGCCGAGCGTGTAACCCGAGGCCGCAGCGCTGGTGGGGCTTGA
Upstream 100 bases:
>100_bases GGTCACGGGGATGCCAACGCGACGGCAGAATGCAGTCCGCGTCTCGCCGCTCTGGCGGTACTCCTCCAACAGACGTTGGA CTTCTTCGGCGCTTCGCCTT
Downstream 100 bases:
>100_bases TAGGTATCTCCAACGAGTTATCAGCGTGACAGGAAGCGACCTTACCAAATTTCTAAGGACCCCCATAATAGTGATTAATC CGTGCCTGCTCAATCCCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MDIPPSHQFRGKAIQDGLVRRLRISGQKLATKTCTSTGCPIAYNVYFGGKLVRSKGVVVVTDRLGSVRANSNGEFMSYYP YGEERTSTADNREKFGTYTRDNVTQDYADQRYYAVGMGRFNSADPSGMKSVHPQNPSSWNLLSYGLNDPIGLNDPRGLNA DSCDAANPDEDCFEENCDADVSCVDTSEDGGGGGDDGADDGCNWDSTTSTLSCPSSPVVLMGANDIQSIQSWYRNLLEHL DKIAQEPGSQAVDHWQGEVREFTRRILSRAERVTRGRSAGGA
Sequences:
>Translated_282_residues MDIPPSHQFRGKAIQDGLVRRLRISGQKLATKTCTSTGCPIAYNVYFGGKLVRSKGVVVVTDRLGSVRANSNGEFMSYYP YGEERTSTADNREKFGTYTRDNVTQDYADQRYYAVGMGRFNSADPSGMKSVHPQNPSSWNLLSYGLNDPIGLNDPRGLNA DSCDAANPDEDCFEENCDADVSCVDTSEDGGGGGDDGADDGCNWDSTTSTLSCPSSPVVLMGANDIQSIQSWYRNLLEHL DKIAQEPGSQAVDHWQGEVREFTRRILSRAERVTRGRSAGGA >Mature_282_residues MDIPPSHQFRGKAIQDGLVRRLRISGQKLATKTCTSTGCPIAYNVYFGGKLVRSKGVVVVTDRLGSVRANSNGEFMSYYP YGEERTSTADNREKFGTYTRDNVTQDYADQRYYAVGMGRFNSADPSGMKSVHPQNPSSWNLLSYGLNDPIGLNDPRGLNA DSCDAANPDEDCFEENCDADVSCVDTSEDGGGGGDDGADDGCNWDSTTSTLSCPSSPVVLMGANDIQSIQSWYRNLLEHL DKIAQEPGSQAVDHWQGEVREFTRRILSRAERVTRGRSAGGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30736; Mature: 30736
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIPPSHQFRGKAIQDGLVRRLRISGQKLATKTCTSTGCPIAYNVYFGGKLVRSKGVVVV CCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEEECCEEECCCCEEEE TDRLGSVRANSNGEFMSYYPYGEERTSTADNREKFGTYTRDNVTQDYADQRYYAVGMGRF ECCCCCEEECCCCCEEEECCCCCCCCCCCCCHHHHCCCCCCCCHHHHHCCEEEEEECCCC NSADPSGMKSVHPQNPSSWNLLSYGLNDPIGLNDPRGLNADSCDAANPDEDCFEENCDAD CCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC VSCVDTSEDGGGGGDDGADDGCNWDSTTSTLSCPSSPVVLMGANDIQSIQSWYRNLLEHL CEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCHHHHHHHHHHHHHHHHH DKIAQEPGSQAVDHWQGEVREFTRRILSRAERVTRGRSAGGA HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MDIPPSHQFRGKAIQDGLVRRLRISGQKLATKTCTSTGCPIAYNVYFGGKLVRSKGVVVV CCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEEECCEEECCCCEEEE TDRLGSVRANSNGEFMSYYPYGEERTSTADNREKFGTYTRDNVTQDYADQRYYAVGMGRF ECCCCCEEECCCCCEEEECCCCCCCCCCCCCHHHHCCCCCCCCHHHHHCCEEEEEECCCC NSADPSGMKSVHPQNPSSWNLLSYGLNDPIGLNDPRGLNADSCDAANPDEDCFEENCDAD CCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC VSCVDTSEDGGGGGDDGADDGCNWDSTTSTLSCPSSPVVLMGANDIQSIQSWYRNLLEHL CEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCHHHHHHHHHHHHHHHHH DKIAQEPGSQAVDHWQGEVREFTRRILSRAERVTRGRSAGGA HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA