| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621644
Identifier: 116621644
GI number: 116621644
Start: 3204259
End: 3205326
Strand: Direct
Name: 116621644
Synonym: Acid_2526
Alternate gene names: NA
Gene position: 3204259-3205326 (Clockwise)
Preceding gene: 116621643
Following gene: 116621645
Centisome position: 32.15
GC content: 56.74
Gene sequence:
>1068_bases ATGCATGATTTAAGTTCCCATCTCAACGAGAAGCAGCTTCGAGAGAAGGTTTCGAACGGTTCGGAGAAGGTAGACGACTA CCTGGAACTTGCGAGCCTTCTTTTCGAGACACACCGCTTCGAAGAGGCGATCGAGACGCTAAGACTTGGCCTCAGTATTG GATTTGGAAGCGTCTCGCGGGCTACCCTGCTCATCGCGCTCGGTTGGTACCTCAATGCGGTAAGCGGTGACAGAGACGCT CCACAGGCACTGGGAGAGGAAGCAATCGCGCTAGTGGAAGGCCTCGATGCTTGTGAGGGGCTGATCACCAAGGCTAGAGC AAAGGGCTTAGTAGCGGTCTGCGCCTGGGTCGATAACCCTGGTCGCGCCGAAGGGATAGCCACATCCGCACTGGCGCTTT TTGACCGCGCATTGGGACTGAATTGCCTCAAGGAGGGTGCAGATCAATTCGAAGCATTTTTGGAATCGGCTCGCTTGAGC TGTTTATTGAGCCGATTTGAGGACGCCGCAACTTATTGCAAACACGCACTGCAAGCGGCTCCAGATGAGGACCGGGAACT GAGTGCTCTCATCGAGTTGGGCACGGTTTATCGCGAGTCCGGACGGCTGACCGAGGCCAGAGTAGTCCTTGCCCGAGCGA TCGGCTTGCAGGGCGTGGCTCCGTTTGGACTAATCCGCCCCTACTTTGAGCTGGGCTTAACAGAGAGGGCGCTGGGAAAG ACCGCTGAGGCTCGGTCGAAGGTGCGAAAAGCAATCGATCTTCTTGAACTCACTCCGGGTTTCCAGGTCACGCTGCTGGC TGAGTATCTCAGAGAGGAAGGCTACATCTCATACGACCTCGACGACATTGAGCAAGCGGCAAGATCGTTTCAAACCGCGC TCGGGCACTATCCCGTGTCCGACCCCTTCCACTGGAGCTCGTTGCTTTGGCTCGCGCGCTGTCAGGCCGACTTGGGGCAA TTTGAAACCGCCAGAATGAACGCGACGCTAGTCGGCGGGTCAGTGGTGGCCTCTGGCCAAGACCGAGAGGATGCGAATGA GCTTCTGCGAGACCTTTCCGACAAATAG
Upstream 100 bases:
>100_bases TTGCCATCCTAAGCGCTCTCCACAACCTAGAGGTGGGTGTCTTCGGGCCGATCATTGATGTGCGGCTGCCTCAGAACTGT CTACCAGGAACAGGCCCAAG
Downstream 100 bases:
>100_bases GACGAAACTGCGGGCCAGCAGGACGACGTCGATCCCCGATTCATCGTCGCACTTGCAGGAGCCGAGTCTCAGTTCGGAAC TCATCTCGGTTGGGGTCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MHDLSSHLNEKQLREKVSNGSEKVDDYLELASLLFETHRFEEAIETLRLGLSIGFGSVSRATLLIALGWYLNAVSGDRDA PQALGEEAIALVEGLDACEGLITKARAKGLVAVCAWVDNPGRAEGIATSALALFDRALGLNCLKEGADQFEAFLESARLS CLLSRFEDAATYCKHALQAAPDEDRELSALIELGTVYRESGRLTEARVVLARAIGLQGVAPFGLIRPYFELGLTERALGK TAEARSKVRKAIDLLELTPGFQVTLLAEYLREEGYISYDLDDIEQAARSFQTALGHYPVSDPFHWSSLLWLARCQADLGQ FETARMNATLVGGSVVASGQDREDANELLRDLSDK
Sequences:
>Translated_355_residues MHDLSSHLNEKQLREKVSNGSEKVDDYLELASLLFETHRFEEAIETLRLGLSIGFGSVSRATLLIALGWYLNAVSGDRDA PQALGEEAIALVEGLDACEGLITKARAKGLVAVCAWVDNPGRAEGIATSALALFDRALGLNCLKEGADQFEAFLESARLS CLLSRFEDAATYCKHALQAAPDEDRELSALIELGTVYRESGRLTEARVVLARAIGLQGVAPFGLIRPYFELGLTERALGK TAEARSKVRKAIDLLELTPGFQVTLLAEYLREEGYISYDLDDIEQAARSFQTALGHYPVSDPFHWSSLLWLARCQADLGQ FETARMNATLVGGSVVASGQDREDANELLRDLSDK >Mature_355_residues MHDLSSHLNEKQLREKVSNGSEKVDDYLELASLLFETHRFEEAIETLRLGLSIGFGSVSRATLLIALGWYLNAVSGDRDA PQALGEEAIALVEGLDACEGLITKARAKGLVAVCAWVDNPGRAEGIATSALALFDRALGLNCLKEGADQFEAFLESARLS CLLSRFEDAATYCKHALQAAPDEDRELSALIELGTVYRESGRLTEARVVLARAIGLQGVAPFGLIRPYFELGLTERALGK TAEARSKVRKAIDLLELTPGFQVTLLAEYLREEGYISYDLDDIEQAARSFQTALGHYPVSDPFHWSSLLWLARCQADLGQ FETARMNATLVGGSVVASGQDREDANELLRDLSDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38781; Mature: 38781
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: PS50293 TPR_REGION L=RR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDLSSHLNEKQLREKVSNGSEKVDDYLELASLLFETHRFEEAIETLRLGLSIGFGSVSR CCCHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH ATLLIALGWYLNAVSGDRDAPQALGEEAIALVEGLDACEGLITKARAKGLVAVCAWVDNP HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC GRAEGIATSALALFDRALGLNCLKEGADQFEAFLESARLSCLLSRFEDAATYCKHALQAA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PDEDRELSALIELGTVYRESGRLTEARVVLARAIGLQGVAPFGLIRPYFELGLTERALGK CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHCC TAEARSKVRKAIDLLELTPGFQVTLLAEYLREEGYISYDLDDIEQAARSFQTALGHYPVS HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHCCCCCC DPFHWSSLLWLARCQADLGQFETARMNATLVGGSVVASGQDREDANELLRDLSDK CCCHHHHHHHHHHHHHHHCCCHHHHCCEEEECCEEEECCCCHHHHHHHHHHHCCC >Mature Secondary Structure MHDLSSHLNEKQLREKVSNGSEKVDDYLELASLLFETHRFEEAIETLRLGLSIGFGSVSR CCCHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH ATLLIALGWYLNAVSGDRDAPQALGEEAIALVEGLDACEGLITKARAKGLVAVCAWVDNP HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC GRAEGIATSALALFDRALGLNCLKEGADQFEAFLESARLSCLLSRFEDAATYCKHALQAA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PDEDRELSALIELGTVYRESGRLTEARVVLARAIGLQGVAPFGLIRPYFELGLTERALGK CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHCC TAEARSKVRKAIDLLELTPGFQVTLLAEYLREEGYISYDLDDIEQAARSFQTALGHYPVS HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHCCCCCC DPFHWSSLLWLARCQADLGQFETARMNATLVGGSVVASGQDREDANELLRDLSDK CCCHHHHHHHHHHHHHHHCCCHHHHCCEEEECCEEEECCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA