Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

Click here to switch to the map view.

The map label for this gene is 116621554

Identifier: 116621554

GI number: 116621554

Start: 3099028

End: 3099777

Strand: Direct

Name: 116621554

Synonym: Acid_2436

Alternate gene names: NA

Gene position: 3099028-3099777 (Clockwise)

Preceding gene: 116621548

Following gene: 116621558

Centisome position: 31.1

GC content: 67.07

Gene sequence:

>750_bases
ATGCACAAATTGTCATCCACGGCTCCAATCTGGATCGCGCCAATCATGCTGCTCGCCGGTTGTTCGAAGTCCCCTGTTGC
CACTGCCTCGTCCAGCCCGGTAGGTTATGCCCAGCCTGCGTCCGCTGCGTCGCCCGCTCCGCCGGCCTCTGCGCCGGCTA
CATCGCCTGCTCCCGCGTCGCCGGCCGCCGACCCTGCGGAGCCTGTCGCCCCGCCTCCCGCCGAGACGGCCGAGGTTCGC
CCCGTGGCCGTCATTCCCAGCGGCACGCCGCTGCACGTAAGGATCGATGAATCCATCGATACACGCCGCAATCGCGCCGG
CGACGGCTTCTCCGCGACGTTATCTCAGCCCGTGGAACACAATGGAAGAGTGCTGATTCCCGCCGGCACCGTGTTTCGCG
GCCATGTGACTTCGGCGAGCGCCTCCGGGCGTCTGAAGGGCAGGGCACAGCTTGGCATCGCGCTCGATAGTTTCCGGCTG
AACGGCCGCCAGTACCGCGTCACCACCACCAGCGTGGATCGCGTCAGCGAAGCTCACAAGAAGCGCAACGGATTCCTGAT
CGGCGGAGGCGCCGGATTGGGAGCCGCGATCGGCGCGATTGCCGGCGGCGGCAAAGGCGCGCTAATAGGAGCCGGAGCCG
GTGCTGGAGCGGGCACCGCGGGTGCTGCCTTCACCGGCAAGAAAGAGGTCGGAATCGGCGCCGAAACGCCGCTGCGCTTC
ACCTTGCGCTCGGCCGTGGAACTTCAGTGA

Upstream 100 bases:

>100_bases
GGGAGGTTTTTATACAGTTTGCCACCATACGCCGTGTTGTACTTGAACTTACCGATTGGCCCCTGCCTTGCTTCTTAGCT
TCAACTGAGAGGAAACATTC

Downstream 100 bases:

>100_bases
ATCGTGACCTTCACCGTCTCCGCGGAGGGGCCGGATTCCAGCATGGGATGCGCCTGATAATCACGTAGGGTCTTCAGTGC
GCTTTGGTAGGCCGCCGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MHKLSSTAPIWIAPIMLLAGCSKSPVATASSSPVGYAQPASAASPAPPASAPATSPAPASPAADPAEPVAPPPAETAEVR
PVAVIPSGTPLHVRIDESIDTRRNRAGDGFSATLSQPVEHNGRVLIPAGTVFRGHVTSASASGRLKGRAQLGIALDSFRL
NGRQYRVTTTSVDRVSEAHKKRNGFLIGGGAGLGAAIGAIAGGGKGALIGAGAGAGAGTAGAAFTGKKEVGIGAETPLRF
TLRSAVELQ

Sequences:

>Translated_249_residues
MHKLSSTAPIWIAPIMLLAGCSKSPVATASSSPVGYAQPASAASPAPPASAPATSPAPASPAADPAEPVAPPPAETAEVR
PVAVIPSGTPLHVRIDESIDTRRNRAGDGFSATLSQPVEHNGRVLIPAGTVFRGHVTSASASGRLKGRAQLGIALDSFRL
NGRQYRVTTTSVDRVSEAHKKRNGFLIGGGAGLGAAIGAIAGGGKGALIGAGAGAGAGTAGAAFTGKKEVGIGAETPLRF
TLRSAVELQ
>Mature_249_residues
MHKLSSTAPIWIAPIMLLAGCSKSPVATASSSPVGYAQPASAASPAPPASAPATSPAPASPAADPAEPVAPPPAETAEVR
PVAVIPSGTPLHVRIDESIDTRRNRAGDGFSATLSQPVEHNGRVLIPAGTVFRGHVTSASASGRLKGRAQLGIALDSFRL
NGRQYRVTTTSVDRVSEAHKKRNGFLIGGGAGLGAAIGAIAGGGKGALIGAGAGAGAGTAGAAFTGKKEVGIGAETPLRF
TLRSAVELQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24685; Mature: 24685

Theoretical pI: Translated: 10.97; Mature: 10.97

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKLSSTAPIWIAPIMLLAGCSKSPVATASSSPVGYAQPASAASPAPPASAPATSPAPAS
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PAADPAEPVAPPPAETAEVRPVAVIPSGTPLHVRIDESIDTRRNRAGDGFSATLSQPVEH
CCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCHHHHHHCCCCCCCHHHCCCCCC
NGRVLIPAGTVFRGHVTSASASGRLKGRAQLGIALDSFRLNGRQYRVTTTSVDRVSEAHK
CCEEEEECCCEEECEECCCCCCCCCCCCEEEEEEEEEEEECCEEEEEEECHHHHHHHHHH
KRNGFLIGGGAGLGAAIGAIAGGGKGALIGAGAGAGAGTAGAAFTGKKEVGIGAETPLRF
HHCCEEEECCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEECCCCCCCCCCCCCCEE
TLRSAVELQ
EECHHEECC
>Mature Secondary Structure
MHKLSSTAPIWIAPIMLLAGCSKSPVATASSSPVGYAQPASAASPAPPASAPATSPAPAS
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PAADPAEPVAPPPAETAEVRPVAVIPSGTPLHVRIDESIDTRRNRAGDGFSATLSQPVEH
CCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCHHHHHHCCCCCCCHHHCCCCCC
NGRVLIPAGTVFRGHVTSASASGRLKGRAQLGIALDSFRLNGRQYRVTTTSVDRVSEAHK
CCEEEEECCCEEECEECCCCCCCCCCCCEEEEEEEEEEEECCEEEEEEECHHHHHHHHHH
KRNGFLIGGGAGLGAAIGAIAGGGKGALIGAGAGAGAGTAGAAFTGKKEVGIGAETPLRF
HHCCEEEECCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEECCCCCCCCCCCCCCEE
TLRSAVELQ
EECHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA