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The map label for this gene is 116621548

Identifier: 116621548

GI number: 116621548

Start: 3093683

End: 3094891

Strand: Direct

Name: 116621548

Synonym: Acid_2430

Alternate gene names: NA

Gene position: 3093683-3094891 (Clockwise)

Preceding gene: 116621547

Following gene: 116621554

Centisome position: 31.04

GC content: 66.34

Gene sequence:

>1209_bases
ATGTCCGCGCCTGAAGAACTGGTGGAGCATCTCTTCCGCCACCAGGCGGGCCGCATGGTCTCCACTCTGACGCGCATCCT
CGGACCGCGCAACCTGCAACTTGCCGAAGACGTAGTGCAGGAGGCGCTGATCCGCGCGCTGGAGCTTTGGCCGCATCGCG
GCATACCCGCTAATCCGGCGGCGTGGCTCATCGAGGTCGCGCGCAATCGCGCTCTCGATGTGCTTCGCCGCGAGGCGTCG
CTCGCCGCCAAAGCGGACGAATTGACGCGAGTCTTTTCGGCCGCCATCGCCGGCGCCGAGGGGATGGACGATCAGCTCGC
AATGATCTTTCTCTGCGCTCATCCGGCCATCCCGCACGAGGCCCGCGTCGCGCTCACGCTCAAGACTGTCTGCGGCTTCA
GCACGTCCGAAATCGCCCGCGCGTTTCTGATTCAGGAACCGGCCGCCGCGCAGCGCATCGTCCGCGCCAAACGCCTGGTG
CGCGACCTGAATTTCGCGCTGCCGGAGGACGGCGAGCTTGCCGCGCGCCGTGAAAGCGTGCTCGAAGTCCTCTACCTGAT
GTTCAACGAGGGCTACACTCGCAATGCCGTCGACCTCTGCGAAGAGGCCATTCGTCTCGGCATTCTGGTGGCCGATCATC
CCGCGACGCACGCGCCCGAAGTGGACGCGCTGCTCGCCCTCTTCCTGCTGCTATCGGCGCGCACCCCCGCCCGCATCGAT
CATCGTGGCGATCTCTTCCTGCTTGCCGATCAGGACCGCAGGCTTTGGAATGGCGAGCGCATTTCCGACGGCATGCGCCG
GCTCGATCGCAGCGCGGCCGGCTACCGCGTCAGCACGTATCATCTGGAGGCTGCGATCGCCGCCGCGCACGCCACGGCGT
CCGATTTCGCGTCCACCGATTGGTGTTTCATCGTGGATCAATATGACCAGCTCTTCGCGCTCAATCCTTCGCCCGTGATC
GCGCTCAATCGCGCGGTCGCGATCTCACGCGCCGAGGGCGCGGCCGCCGGGTTGCGCGCGCTCGCGGTCATCGAGCATCA
TCCCGCGCTGGCCAGCTACTACCTGCTCCACGCCACCCGGGCGCGGCTCCACGAAGAACTCGGTAATCATCCGTCCGCCG
CCCTCAGTTACGGGCGTGCCCTGGAATGCGGATGCTCCCCCGCGGAACGCCGCTTTCTCGAACGCCAGGCAACGGAGCCT
CGACCGTAA

Upstream 100 bases:

>100_bases
CAAGCCGAGACCTACGAGCAGGCCGCCGAACTGTGCCGCGACTCGCCGCATTTGGACTACGGCCCGATCGAGATCCGCCG
CATTGAGGTGCTCTGATTCC

Downstream 100 bases:

>100_bases
AGGAAGCGGTCTCGTGATGGGGGCGATCGCCCCCTTAACGGTCGCGGCTCGGATTTGAGGCGTATCAAGAGCGGGAAGGG
CGATTTCTCAAGCGAGCGAT

Product: RNA polymerase ECF-subfamily sigma factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MSAPEELVEHLFRHQAGRMVSTLTRILGPRNLQLAEDVVQEALIRALELWPHRGIPANPAAWLIEVARNRALDVLRREAS
LAAKADELTRVFSAAIAGAEGMDDQLAMIFLCAHPAIPHEARVALTLKTVCGFSTSEIARAFLIQEPAAAQRIVRAKRLV
RDLNFALPEDGELAARRESVLEVLYLMFNEGYTRNAVDLCEEAIRLGILVADHPATHAPEVDALLALFLLLSARTPARID
HRGDLFLLADQDRRLWNGERISDGMRRLDRSAAGYRVSTYHLEAAIAAAHATASDFASTDWCFIVDQYDQLFALNPSPVI
ALNRAVAISRAEGAAAGLRALAVIEHHPALASYYLLHATRARLHEELGNHPSAALSYGRALECGCSPAERRFLERQATEP
RP

Sequences:

>Translated_402_residues
MSAPEELVEHLFRHQAGRMVSTLTRILGPRNLQLAEDVVQEALIRALELWPHRGIPANPAAWLIEVARNRALDVLRREAS
LAAKADELTRVFSAAIAGAEGMDDQLAMIFLCAHPAIPHEARVALTLKTVCGFSTSEIARAFLIQEPAAAQRIVRAKRLV
RDLNFALPEDGELAARRESVLEVLYLMFNEGYTRNAVDLCEEAIRLGILVADHPATHAPEVDALLALFLLLSARTPARID
HRGDLFLLADQDRRLWNGERISDGMRRLDRSAAGYRVSTYHLEAAIAAAHATASDFASTDWCFIVDQYDQLFALNPSPVI
ALNRAVAISRAEGAAAGLRALAVIEHHPALASYYLLHATRARLHEELGNHPSAALSYGRALECGCSPAERRFLERQATEP
RP
>Mature_401_residues
SAPEELVEHLFRHQAGRMVSTLTRILGPRNLQLAEDVVQEALIRALELWPHRGIPANPAAWLIEVARNRALDVLRREASL
AAKADELTRVFSAAIAGAEGMDDQLAMIFLCAHPAIPHEARVALTLKTVCGFSTSEIARAFLIQEPAAAQRIVRAKRLVR
DLNFALPEDGELAARRESVLEVLYLMFNEGYTRNAVDLCEEAIRLGILVADHPATHAPEVDALLALFLLLSARTPARIDH
RGDLFLLADQDRRLWNGERISDGMRRLDRSAAGYRVSTYHLEAAIAAAHATASDFASTDWCFIVDQYDQLFALNPSPVIA
LNRAVAISRAEGAAAGLRALAVIEHHPALASYYLLHATRARLHEELGNHPSAALSYGRALECGCSPAERRFLERQATEPR
P

Specific function: Unknown

COG id: COG4941

COG function: function code K; Predicted RNA polymerase sigma factor containing a TPR repeat domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008940
- InterPro:   IPR014284
- InterPro:   IPR007627
- InterPro:   IPR013249
- InterPro:   IPR013325
- InterPro:   IPR013324 [H]

Pfam domain/function: PF04542 Sigma70_r2; PF08281 Sigma70_r4_2 [H]

EC number: NA

Molecular weight: Translated: 44291; Mature: 44160

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: PS01063 SIGMA70_ECF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPEELVEHLFRHQAGRMVSTLTRILGPRNLQLAEDVVQEALIRALELWPHRGIPANPA
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHH
AWLIEVARNRALDVLRREASLAAKADELTRVFSAAIAGAEGMDDQLAMIFLCAHPAIPHE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHEECCCCCCCC
ARVALTLKTVCGFSTSEIARAFLIQEPAAAQRIVRAKRLVRDLNFALPEDGELAARRESV
CEEEEEEHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
LEVLYLMFNEGYTRNAVDLCEEAIRLGILVADHPATHAPEVDALLALFLLLSARTPARID
HHHHHHHHCCCCCCCHHHHHHHHHHHCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCC
HRGDLFLLADQDRRLWNGERISDGMRRLDRSAAGYRVSTYHLEAAIAAAHATASDFASTD
CCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHCCCCC
WCFIVDQYDQLFALNPSPVIALNRAVAISRAEGAAAGLRALAVIEHHPALASYYLLHATR
EEEEEECCCCEEECCCCCEEEEHHHHEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH
ARLHEELGNHPSAALSYGRALECGCSPAERRFLERQATEPRP
HHHHHHHCCCHHHHHHHCCHHCCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SAPEELVEHLFRHQAGRMVSTLTRILGPRNLQLAEDVVQEALIRALELWPHRGIPANPA
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHH
AWLIEVARNRALDVLRREASLAAKADELTRVFSAAIAGAEGMDDQLAMIFLCAHPAIPHE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHEECCCCCCCC
ARVALTLKTVCGFSTSEIARAFLIQEPAAAQRIVRAKRLVRDLNFALPEDGELAARRESV
CEEEEEEHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
LEVLYLMFNEGYTRNAVDLCEEAIRLGILVADHPATHAPEVDALLALFLLLSARTPARID
HHHHHHHHCCCCCCCHHHHHHHHHHHCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCC
HRGDLFLLADQDRRLWNGERISDGMRRLDRSAAGYRVSTYHLEAAIAAAHATASDFASTD
CCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHCCCCC
WCFIVDQYDQLFALNPSPVIALNRAVAISRAEGAAAGLRALAVIEHHPALASYYLLHATR
EEEEEECCCCEEECCCCCEEEEHHHHEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH
ARLHEELGNHPSAALSYGRALECGCSPAERRFLERQATEPRP
HHHHHHHCCCHHHHHHHCCHHCCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11481430; 7751302 [H]