| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620665
Identifier: 116620665
GI number: 116620665
Start: 1897973
End: 1898497
Strand: Direct
Name: 116620665
Synonym: Acid_1545
Alternate gene names: NA
Gene position: 1897973-1898497 (Clockwise)
Preceding gene: 116620664
Following gene: 116620666
Centisome position: 19.05
GC content: 60.38
Gene sequence:
>525_bases ATGCGAACCTCCGCATTGCTGGTGATGTTCCTGCTGGCCCGTTCCATGCTGCCTCAGATGCGGGCTCCGGCCTCCGAGTA TCAGGTGAAGGCTGCATTCCTGCTGAACTTCACCAAGTTTATCGAATGGCCTCCCCGCGCTTTTGATGACGCCAAGGCGC CGATTGCGATCTGCCTTTTCGGCGACGATCCGTTCGACGGCGCATTGAACCAACTGGTGGAAGGCGAGGTGGTCAACGGC AGGAAGTTGGTGGTACAGAAGATCCGCCACGCGCCCGCGGCGAAGACCTGCCAGGTAGTTTTTGTCAATAAGGCCGAGAA GGAACCGTCGAAGATTCTCGGCGGGCTCGGCCCCGGGGTGCTGACAGTCGGCGAGGGCGAAGGCTTTCTCCGTGACGGCG GCATGATCGCTTTTGTGTTGGAGAACCACCGGGTGCGCTTCGATATCAACCAGGGCGCGGCCTCCAATGCCGAGCTCAGC CTGAGCTCCCGGCTGTTGAGCGTGGCGAAAACGGTGGCAAAATGA
Upstream 100 bases:
>100_bases CTGCTCCAGCCGTGGCACTTCGAGTATCTTGGCGATCCGGGCTCGCTGGTCGGTATCAAGAGAAGTGGTTACCTCAGCCT GACGTGGACCAGGTAAACCC
Downstream 100 bases:
>100_bases TGCGTCCGCTGCGCGATCTACCGATCCGGCAGAAGCTCGTGGTCATCATGATGCTGACCACGGCCGCGGCGCTGTTGTTG TCGGGCTTCGGGATCGTGGC
Product: putative transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MRTSALLVMFLLARSMLPQMRAPASEYQVKAAFLLNFTKFIEWPPRAFDDAKAPIAICLFGDDPFDGALNQLVEGEVVNG RKLVVQKIRHAPAAKTCQVVFVNKAEKEPSKILGGLGPGVLTVGEGEGFLRDGGMIAFVLENHRVRFDINQGAASNAELS LSSRLLSVAKTVAK
Sequences:
>Translated_174_residues MRTSALLVMFLLARSMLPQMRAPASEYQVKAAFLLNFTKFIEWPPRAFDDAKAPIAICLFGDDPFDGALNQLVEGEVVNG RKLVVQKIRHAPAAKTCQVVFVNKAEKEPSKILGGLGPGVLTVGEGEGFLRDGGMIAFVLENHRVRFDINQGAASNAELS LSSRLLSVAKTVAK >Mature_174_residues MRTSALLVMFLLARSMLPQMRAPASEYQVKAAFLLNFTKFIEWPPRAFDDAKAPIAICLFGDDPFDGALNQLVEGEVVNG RKLVVQKIRHAPAAKTCQVVFVNKAEKEPSKILGGLGPGVLTVGEGEGFLRDGGMIAFVLENHRVRFDINQGAASNAELS LSSRLLSVAKTVAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18855; Mature: 18855
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTSALLVMFLLARSMLPQMRAPASEYQVKAAFLLNFTKFIEWPPRAFDDAKAPIAICLF CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE GDDPFDGALNQLVEGEVVNGRKLVVQKIRHAPAAKTCQVVFVNKAEKEPSKILGGLGPGV CCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHCCCCCCE LTVGEGEGFLRDGGMIAFVLENHRVRFDINQGAASNAELSLSSRLLSVAKTVAK EEEECCCCEEECCCEEEEEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRTSALLVMFLLARSMLPQMRAPASEYQVKAAFLLNFTKFIEWPPRAFDDAKAPIAICLF CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE GDDPFDGALNQLVEGEVVNGRKLVVQKIRHAPAAKTCQVVFVNKAEKEPSKILGGLGPGV CCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHCCCCCCE LTVGEGEGFLRDGGMIAFVLENHRVRFDINQGAASNAELSLSSRLLSVAKTVAK EEEECCCCEEECCCEEEEEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA