| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620347
Identifier: 116620347
GI number: 116620347
Start: 1507303
End: 1508778
Strand: Reverse
Name: 116620347
Synonym: Acid_1224
Alternate gene names: NA
Gene position: 1508778-1507303 (Counterclockwise)
Preceding gene: 116620351
Following gene: 116620346
Centisome position: 15.14
GC content: 65.38
Gene sequence:
>1476_bases ATGAAACGGATCCGACTCGCTCTCGTGCTCACGCTTTTTTCGGCGCCTTGTGCCTCGGGCCAGCCGCTCCTGCGGCTGAA GGCACGCACCGCAACCACAGGTCCGCAGCGCCGCATCAACAACGGCACACACTACATCCTGCAATTCGCCGCCGAGCCCG TCCCCTCGGACCTTGACGAACTCAAAGGCCGCGGCATCCACGTACTGCAATATGTCCCCGAGTCGGCGCTGATAGTGGCG AGTGCCGCGCCTCCCGACCTGCGCGGCCTGAACGTCGTCTCCATGACCACGATGGACGTATCGGACAAAATCAGCCCCGT GCTGGGAGGAACTATCTCGGGCGCCCTCCTGGTCTTCTTCCATGCAGATATCACCGACTCTGTGGCGCGTGCCGTGGTCC GCGAGTTGGGCTTCGACGTGATCGAAAATGCCGCACTGCTCCCCGGCCAGCTCATCCTGCAGGGCGCGCACCGCGGTATC GACGCCCTCGCCGCGCGCGACGAAGTTGCCTATATCATTCCCGCATCTCCCGAACTCGCCGCAGGCATCCCGGTCGCGGG CTGCGTCGGCGCTGCAACCCAGGTGGCGCCCGTCGGTCAGTACGTCTTGATGAGTGCCGGCTGGCCCAGGGATTCCGCCG GCAAGGTCACGCTGCAATACTTCATTCGCTCCCTGACCGACCAGTTGGACCCTGCCACCAGCCGCTCCGAAATCGAACGC GCGCTCCGGGAATGGACGCGCTACGCCAACTTCACCTTTAGTCCCGCCCTCCAGCAGGGCGCCAACCGCACCATCGACAT CCTCTTCGCCCGCGGGACCCACGGCGACGGCTATCCATTCGACGGCCGCGGCGGCACGCTCGCCCATACCTTCTACCCCG CGCCCCCCAATCCCGAACCCATCGCCGGCGACATGCACCTCGATGGCGACGAGCCCTGGGCCGTCGGGACCAACGTGGAT CTCTATTCGGTCGCACTGCACGAGGCTGGCCACGCTCTGGGATTGGGGCACGCCGATCTTCCCGGATCGGTCATGTATCC TTATTACCGGCTCTCCACAACTCTCTCTGGCGATGACATCGCCGGCATCCGCGCTCTCTACGGCAGTAACGTAGCAGCGC CGCCTCCCGCCAATCCGCCGGCCCCGCCCACCCCCGCTCCGCCTACACCCCCGAAGCCCACCCCGACGCCTCCGGTGACG GACACCGTGGCCCCCACACTATCGATCGATTCGCCGGGATTCACCATCGGTTCCACCACCGCCTCGTCCATCGCCATCGC CGGTAAGGCCAGCGATAACATCTCCGTCAGCTCTGTCAAATGGAGCAGCTCGACCGGATCTTCCGGCATCGTGTCGGGCA CCACTACCTGGTCGGTAAGCGTGCCCCTGCTGATCGGCACCAACACCATCACCGTCCGCGCCTACGATGCAGCCGGCAAC TCGGGGTGGCGATCCATCACGGTGGTCCGCCATTGA
Upstream 100 bases:
>100_bases GCCCGGAGCGGCGAAAAATTCTCACCTAGCGAGCAAATTTTGGCGGACAGCCGACAAATCCCCCAAATCACGGCCGAAGA GAATTTTAAGGGCTGAATAG
Downstream 100 bases:
>100_bases GCCCCACATTTATTTCGCCCGAAGCGTGATGGTTTGAGCAAGTCTGCCGATATAGAGTACAGCGACAAAATGGATCCGAC CGGAGAAGAAGAACACGTCA
Product: peptidase M10A and M12B, matrixin and adamalysin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 491; Mature: 491
Protein sequence:
>491_residues MKRIRLALVLTLFSAPCASGQPLLRLKARTATTGPQRRINNGTHYILQFAAEPVPSDLDELKGRGIHVLQYVPESALIVA SAAPPDLRGLNVVSMTTMDVSDKISPVLGGTISGALLVFFHADITDSVARAVVRELGFDVIENAALLPGQLILQGAHRGI DALAARDEVAYIIPASPELAAGIPVAGCVGAATQVAPVGQYVLMSAGWPRDSAGKVTLQYFIRSLTDQLDPATSRSEIER ALREWTRYANFTFSPALQQGANRTIDILFARGTHGDGYPFDGRGGTLAHTFYPAPPNPEPIAGDMHLDGDEPWAVGTNVD LYSVALHEAGHALGLGHADLPGSVMYPYYRLSTTLSGDDIAGIRALYGSNVAAPPPANPPAPPTPAPPTPPKPTPTPPVT DTVAPTLSIDSPGFTIGSTTASSIAIAGKASDNISVSSVKWSSSTGSSGIVSGTTTWSVSVPLLIGTNTITVRAYDAAGN SGWRSITVVRH
Sequences:
>Translated_491_residues MKRIRLALVLTLFSAPCASGQPLLRLKARTATTGPQRRINNGTHYILQFAAEPVPSDLDELKGRGIHVLQYVPESALIVA SAAPPDLRGLNVVSMTTMDVSDKISPVLGGTISGALLVFFHADITDSVARAVVRELGFDVIENAALLPGQLILQGAHRGI DALAARDEVAYIIPASPELAAGIPVAGCVGAATQVAPVGQYVLMSAGWPRDSAGKVTLQYFIRSLTDQLDPATSRSEIER ALREWTRYANFTFSPALQQGANRTIDILFARGTHGDGYPFDGRGGTLAHTFYPAPPNPEPIAGDMHLDGDEPWAVGTNVD LYSVALHEAGHALGLGHADLPGSVMYPYYRLSTTLSGDDIAGIRALYGSNVAAPPPANPPAPPTPAPPTPPKPTPTPPVT DTVAPTLSIDSPGFTIGSTTASSIAIAGKASDNISVSSVKWSSSTGSSGIVSGTTTWSVSVPLLIGTNTITVRAYDAAGN SGWRSITVVRH >Mature_491_residues MKRIRLALVLTLFSAPCASGQPLLRLKARTATTGPQRRINNGTHYILQFAAEPVPSDLDELKGRGIHVLQYVPESALIVA SAAPPDLRGLNVVSMTTMDVSDKISPVLGGTISGALLVFFHADITDSVARAVVRELGFDVIENAALLPGQLILQGAHRGI DALAARDEVAYIIPASPELAAGIPVAGCVGAATQVAPVGQYVLMSAGWPRDSAGKVTLQYFIRSLTDQLDPATSRSEIER ALREWTRYANFTFSPALQQGANRTIDILFARGTHGDGYPFDGRGGTLAHTFYPAPPNPEPIAGDMHLDGDEPWAVGTNVD LYSVALHEAGHALGLGHADLPGSVMYPYYRLSTTLSGDDIAGIRALYGSNVAAPPPANPPAPPTPAPPTPPKPTPTPPVT DTVAPTLSIDSPGFTIGSTTASSIAIAGKASDNISVSSVKWSSSTGSSGIVSGTTTWSVSVPLLIGTNTITVRAYDAAGN SGWRSITVVRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI149999365, Length=244, Percent_Identity=36.0655737704918, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI13027802, Length=244, Percent_Identity=36.0655737704918, Blast_Score=127, Evalue=3e-29, Organism=Homo sapiens, GI11968059, Length=264, Percent_Identity=35.2272727272727, Blast_Score=121, Evalue=2e-27, Organism=Homo sapiens, GI5729929, Length=211, Percent_Identity=36.4928909952607, Blast_Score=121, Evalue=2e-27, Organism=Homo sapiens, GI4505221, Length=185, Percent_Identity=40, Blast_Score=115, Evalue=1e-25, Organism=Homo sapiens, GI4826834, Length=228, Percent_Identity=32.8947368421053, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI4505215, Length=212, Percent_Identity=39.1509433962264, Blast_Score=113, Evalue=4e-25, Organism=Homo sapiens, GI4505211, Length=176, Percent_Identity=36.9318181818182, Blast_Score=112, Evalue=5e-25, Organism=Homo sapiens, GI45359865, Length=174, Percent_Identity=41.3793103448276, Blast_Score=112, Evalue=6e-25, Organism=Homo sapiens, GI225543094, Length=195, Percent_Identity=40.5128205128205, Blast_Score=112, Evalue=7e-25, Organism=Homo sapiens, GI4505217, Length=174, Percent_Identity=41.9540229885057, Blast_Score=109, Evalue=5e-24, Organism=Homo sapiens, GI73858572, Length=179, Percent_Identity=39.1061452513966, Blast_Score=108, Evalue=8e-24, Organism=Homo sapiens, GI4505205, Length=205, Percent_Identity=40, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI4505219, Length=203, Percent_Identity=36.9458128078818, Blast_Score=104, Evalue=2e-22, Organism=Homo sapiens, GI4505209, Length=203, Percent_Identity=36.9458128078818, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI58331148, Length=174, Percent_Identity=37.9310344827586, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI73808266, Length=172, Percent_Identity=36.046511627907, Blast_Score=100, Evalue=6e-21, Organism=Homo sapiens, GI112382270, Length=176, Percent_Identity=35.7954545454545, Blast_Score=97, Evalue=3e-20, Organism=Homo sapiens, GI73808268, Length=202, Percent_Identity=35.1485148514851, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI4505213, Length=161, Percent_Identity=37.2670807453416, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI13236530, Length=162, Percent_Identity=33.3333333333333, Blast_Score=79, Evalue=9e-15, Organism=Homo sapiens, GI22218341, Length=165, Percent_Identity=35.1515151515151, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI74272287, Length=103, Percent_Identity=37.8640776699029, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI11342666, Length=102, Percent_Identity=40.1960784313725, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI189217853, Length=102, Percent_Identity=40.1960784313725, Blast_Score=67, Evalue=5e-11, Organism=Caenorhabditis elegans, GI71987744, Length=192, Percent_Identity=32.8125, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17553904, Length=192, Percent_Identity=32.8125, Blast_Score=99, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17555226, Length=190, Percent_Identity=32.1052631578947, Blast_Score=93, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17558356, Length=272, Percent_Identity=28.3088235294118, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI221468755, Length=246, Percent_Identity=31.7073170731707, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI221468756, Length=246, Percent_Identity=31.7073170731707, Blast_Score=114, Evalue=2e-25, Organism=Drosophila melanogaster, GI45552531, Length=169, Percent_Identity=40.2366863905325, Blast_Score=111, Evalue=9e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51341; Mature: 51341
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRIRLALVLTLFSAPCASGQPLLRLKARTATTGPQRRINNGTHYILQFAAEPVPSDLDE CCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHCCCCCEEEEEEECCCCCCCHHH LKGRGIHVLQYVPESALIVASAAPPDLRGLNVVSMTTMDVSDKISPVLGGTISGALLVFF HCCCCEEEEEECCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCHHHHCCHHCCEEEEEE HADITDSVARAVVRELGFDVIENAALLPGQLILQGAHRGIDALAARDEVAYIIPASPELA ECCHHHHHHHHHHHHHCHHHHHCCCCCCHHHHHHHHHCCHHHHHCCCCEEEEEECCCCHH AGIPVAGCVGAATQVAPVGQYVLMSAGWPRDSAGKVTLQYFIRSLTDQLDPATSRSEIER CCCCHHHHHCCHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHH ALREWTRYANFTFSPALQQGANRTIDILFARGTHGDGYPFDGRGGTLAHTFYPAPPNPEP HHHHHHHHCCCEECHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCC IAGDMHLDGDEPWAVGTNVDLYSVALHEAGHALGLGHADLPGSVMYPYYRLSTTLSGDDI CCCCEEECCCCCEEECCCCEEEEEEHHHCCCEEECCCCCCCCCEECCEEEEEEECCCCCC AGIRALYGSNVAAPPPANPPAPPTPAPPTPPKPTPTPPVTDTVAPTLSIDSPGFTIGSTT HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEECCCC ASSIAIAGKASDNISVSSVKWSSSTGSSGIVSGTTTWSVSVPLLIGTNTITVRAYDAAGN CCEEEEEECCCCCEEEEEEEECCCCCCCCEEECCEEEEEEEEEEEECCEEEEEEEECCCC SGWRSITVVRH CCCEEEEEEEC >Mature Secondary Structure MKRIRLALVLTLFSAPCASGQPLLRLKARTATTGPQRRINNGTHYILQFAAEPVPSDLDE CCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHCCCCCEEEEEEECCCCCCCHHH LKGRGIHVLQYVPESALIVASAAPPDLRGLNVVSMTTMDVSDKISPVLGGTISGALLVFF HCCCCEEEEEECCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCHHHHCCHHCCEEEEEE HADITDSVARAVVRELGFDVIENAALLPGQLILQGAHRGIDALAARDEVAYIIPASPELA ECCHHHHHHHHHHHHHCHHHHHCCCCCCHHHHHHHHHCCHHHHHCCCCEEEEEECCCCHH AGIPVAGCVGAATQVAPVGQYVLMSAGWPRDSAGKVTLQYFIRSLTDQLDPATSRSEIER CCCCHHHHHCCHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHH ALREWTRYANFTFSPALQQGANRTIDILFARGTHGDGYPFDGRGGTLAHTFYPAPPNPEP HHHHHHHHCCCEECHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCC IAGDMHLDGDEPWAVGTNVDLYSVALHEAGHALGLGHADLPGSVMYPYYRLSTTLSGDDI CCCCEEECCCCCEEECCCCEEEEEEHHHCCCEEECCCCCCCCCEECCEEEEEEECCCCCC AGIRALYGSNVAAPPPANPPAPPTPAPPTPPKPTPTPPVTDTVAPTLSIDSPGFTIGSTT HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEECCCC ASSIAIAGKASDNISVSSVKWSSSTGSSGIVSGTTTWSVSVPLLIGTNTITVRAYDAAGN CCEEEEEECCCCCEEEEEEEECCCCCCCCEEECCEEEEEEEEEEEECCEEEEEEEECCCC SGWRSITVVRH CCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA