| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620351
Identifier: 116620351
GI number: 116620351
Start: 1517826
End: 1518749
Strand: Reverse
Name: 116620351
Synonym: Acid_1228
Alternate gene names: NA
Gene position: 1518749-1517826 (Counterclockwise)
Preceding gene: 116620352
Following gene: 116620347
Centisome position: 15.24
GC content: 62.01
Gene sequence:
>924_bases ATGCGTATGAAGCACTTGATTCCCGCTATTGCCGCCAGCCTCCTTATCCTCACTGGCTGTGAGTTTGAGGACTGGGGCGG CATGGAACGCTACCACGAGGATTTTCATTTCAGCTATCCCATGAATACCGGAGGCCGCCTGGCCGTCGAGAGCTTCAATG GGTCGGTGGAGGTATCCACCTGGGACCAGCAGACCGTGGACATTAGCGGCACCAAATACGCCCGCACGCTGGAAGACGCG CGTGATCTCAAAATCGAAATCGATCACGCCCCGGCCTCCGTCTCGATCCGCGCTGTGCGCCCCACGATGCGCCACGGGAA CTATGGAGCCCGCTTCGCGATCAAGGTCCCGCGGGGCGCCGTGCTCGATCGCCTCGTCACCTCCAACGGCGGCATCCGCG CCGACGATGGCGTAGGCCCGTCACGCATGAAGACTTCGAACGGCCACGTCGAGGTGCGCGGGCTGAAAGGTTCGCTCACC GCGGAAACCAGCAATGGTCCTATTGAAGCCCAGGATATCGAAGGCGGAGTCGAAGCCCACAGCTCCAACGGTCACATCCG GCTCGAGCACGTTCACGGCGCGGTGGACGCTACCACGTCCAATAGCGGCATTAACGCCGTCCTCGAAAAGGTCGATGGCG CGGTGCGCCTGCAGAGCTCCAACGGCGCCATAGAATTGACCCTGCCGGCAAACTCGCAGTCCGCTGTTCGCGCTCACACC AGCAACAGCAACATCACGCTTCACCTGCCCGGTGAAGTCAACGCCCGCATCTCCGCCGATACCAGCAACGGCAACATCTC CACGGACTTCGAAATGCGGCTCCGCGGCGAAATCAGCAAACGCCACATCGATGGCACCCTGGGCTCCGGCGGACCGCTCA TCGACCTGAGCACCAGCAACGGCAGCGTGCGCATCGTCAGGTAA
Upstream 100 bases:
>100_bases CAACATCAGCATGATTCGTCTCATTGACGCGGAAAAAGACGCGAAAAACTGAAACAATTCCGCCGCTTGCGGCGTATTTG TCTGTTCGAGGGCCATTTCT
Downstream 100 bases:
>100_bases ACTAACTGATCGGCGTCAGTCCGCGTTTATCCGCGGCCCATTTTTCCTTTTGCGTTCAGCTCCTTCACGAGTTTGTCCAC GTCCAGCGCTTCCACCCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 307; Mature: 307
Protein sequence:
>307_residues MRMKHLIPAIAASLLILTGCEFEDWGGMERYHEDFHFSYPMNTGGRLAVESFNGSVEVSTWDQQTVDISGTKYARTLEDA RDLKIEIDHAPASVSIRAVRPTMRHGNYGARFAIKVPRGAVLDRLVTSNGGIRADDGVGPSRMKTSNGHVEVRGLKGSLT AETSNGPIEAQDIEGGVEAHSSNGHIRLEHVHGAVDATTSNSGINAVLEKVDGAVRLQSSNGAIELTLPANSQSAVRAHT SNSNITLHLPGEVNARISADTSNGNISTDFEMRLRGEISKRHIDGTLGSGGPLIDLSTSNGSVRIVR
Sequences:
>Translated_307_residues MRMKHLIPAIAASLLILTGCEFEDWGGMERYHEDFHFSYPMNTGGRLAVESFNGSVEVSTWDQQTVDISGTKYARTLEDA RDLKIEIDHAPASVSIRAVRPTMRHGNYGARFAIKVPRGAVLDRLVTSNGGIRADDGVGPSRMKTSNGHVEVRGLKGSLT AETSNGPIEAQDIEGGVEAHSSNGHIRLEHVHGAVDATTSNSGINAVLEKVDGAVRLQSSNGAIELTLPANSQSAVRAHT SNSNITLHLPGEVNARISADTSNGNISTDFEMRLRGEISKRHIDGTLGSGGPLIDLSTSNGSVRIVR >Mature_307_residues MRMKHLIPAIAASLLILTGCEFEDWGGMERYHEDFHFSYPMNTGGRLAVESFNGSVEVSTWDQQTVDISGTKYARTLEDA RDLKIEIDHAPASVSIRAVRPTMRHGNYGARFAIKVPRGAVLDRLVTSNGGIRADDGVGPSRMKTSNGHVEVRGLKGSLT AETSNGPIEAQDIEGGVEAHSSNGHIRLEHVHGAVDATTSNSGINAVLEKVDGAVRLQSSNGAIELTLPANSQSAVRAHT SNSNITLHLPGEVNARISADTSNGNISTDFEMRLRGEISKRHIDGTLGSGGPLIDLSTSNGSVRIVR
Specific function: Unknown
COG id: COG3595
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32809; Mature: 32809
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMKHLIPAIAASLLILTGCEFEDWGGMERYHEDFHFSYPMNTGGRLAVESFNGSVEVST CCHHHHHHHHHHHHHEEECCCCCCCCCHHHHHCCEEEECCCCCCCEEEEEECCCEEEEEE WDQQTVDISGTKYARTLEDARDLKIEIDHAPASVSIRAVRPTMRHGNYGARFAIKVPRGA CCCEEEEECCCHHHHHHCCCCCEEEEEECCCCEEEEEEECCHHHCCCCCEEEEEECCCCH VLDRLVTSNGGIRADDGVGPSRMKTSNGHVEVRGLKGSLTAETSNGPIEAQDIEGGVEAH HHHHHHHCCCCEEECCCCCCCCEECCCCEEEEEECCCEEEEECCCCCEEEHCCCCCEEEE SSNGHIRLEHVHGAVDATTSNSGINAVLEKVDGAVRLQSSNGAIELTLPANSQSAVRAHT CCCCCEEEEEECCEEECCCCCCCHHHHHHHCCCEEEEECCCCEEEEEECCCCCCEEEEEC SNSNITLHLPGEVNARISADTSNGNISTDFEMRLRGEISKRHIDGTLGSGGPLIDLSTSN CCCEEEEEECCCCCEEEEEECCCCCEECEEEEEEECCCCEEEECCCCCCCCCEEEEECCC GSVRIVR CCEEEEC >Mature Secondary Structure MRMKHLIPAIAASLLILTGCEFEDWGGMERYHEDFHFSYPMNTGGRLAVESFNGSVEVST CCHHHHHHHHHHHHHEEECCCCCCCCCHHHHHCCEEEECCCCCCCEEEEEECCCEEEEEE WDQQTVDISGTKYARTLEDARDLKIEIDHAPASVSIRAVRPTMRHGNYGARFAIKVPRGA CCCEEEEECCCHHHHHHCCCCCEEEEEECCCCEEEEEEECCHHHCCCCCEEEEEECCCCH VLDRLVTSNGGIRADDGVGPSRMKTSNGHVEVRGLKGSLTAETSNGPIEAQDIEGGVEAH HHHHHHHCCCCEEECCCCCCCCEECCCCEEEEEECCCEEEEECCCCCEEEHCCCCCEEEE SSNGHIRLEHVHGAVDATTSNSGINAVLEKVDGAVRLQSSNGAIELTLPANSQSAVRAHT CCCCCEEEEEECCEEECCCCCCCHHHHHHHCCCEEEEECCCCEEEEEECCCCCCEEEEEC SNSNITLHLPGEVNARISADTSNGNISTDFEMRLRGEISKRHIDGTLGSGGPLIDLSTSN CCCEEEEEECCCCCEEEEEECCCCCEECEEEEEEECCCCEEEECCCCCCCCCEEEEECCC GSVRIVR CCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA