| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620346
Identifier: 116620346
GI number: 116620346
Start: 1506463
End: 1507233
Strand: Reverse
Name: 116620346
Synonym: Acid_1223
Alternate gene names: NA
Gene position: 1507233-1506463 (Counterclockwise)
Preceding gene: 116620347
Following gene: 116620337
Centisome position: 15.12
GC content: 61.22
Gene sequence:
>771_bases ATGGATCCGACCGGAGAAGAAGAACACGTCATGGCTACCCACGGAATCTGCAAGCCGGCCACACTCTTGGAACCCATGAG AGCGACCGCTCCCACAAACCCGCGCACCATCGACTTCACCCAAACCGAGCATGTGCTCGTCTCCCTGGCAAAGATCGTCG AGCAGCGCGACAAACACACCGCCGGCCACTGCGAACGCCTGGCCATCGCCAGCGTGGCGCTCGGCATGGCTATGAAACTC GAGAGCTCCAGCCTGCTCGCGCTCTACCTGGGAGGCTTTCTACACGATGTCGGCAAAGTTGGAATCCCCGATTCCATCCT CTTCAAGCCCGGAAAACTGGATGACGAAGAATGGGAAATCATGCGCGCGCATCCCGTGCGCGGGGAAGAGATCTGCCGTC CGCTGCTCTCCGTGCGCTGCGTGCTCCCAATCATCCGCCACCATCACGAACGCTGGGACGGCTCCGGCTACCCCGATGGC CTCAGCGGCTCGCAGATTCCATTTCTCGCGCGCGTCCTGCAGGTTGCCGATATCTACGACGCGCTCACCAATCCGCGTCC CTATAAACGCACCTTCTCCACCGCGCGCGCCCTCGAAGTGCTCGAAGAAGAAGTCGCCAAAGGATGGCGCGACCCGGATA TCACCGGCGTCTTCGTAGGCCTGCACAAACGCATGCTCTCCAAAATCGCCGACTACCACCCCGGCACGTCCGTGCCCCTC GCTTCCATGCAGGATTCCTTAACCCACCTCCAGGACTTCCTCACCCAGTAG
Upstream 100 bases:
>100_bases GTGGCGATCCATCACGGTGGTCCGCCATTGAGCCCCACATTTATTTCGCCCGAAGCGTGATGGTTTGAGCAAGTCTGCCG ATATAGAGTACAGCGACAAA
Downstream 100 bases:
>100_bases CTACGAGCCGCGACGGTAAGGTAAGGGAGCGATCTCAAATCCTCAGTGGTCGCCGTACTTCTTCTCGCCCGCTTCAATCC GCAGCGCCAGCTTATTCTCC
Product: metal dependent phosphohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MDPTGEEEHVMATHGICKPATLLEPMRATAPTNPRTIDFTQTEHVLVSLAKIVEQRDKHTAGHCERLAIASVALGMAMKL ESSSLLALYLGGFLHDVGKVGIPDSILFKPGKLDDEEWEIMRAHPVRGEEICRPLLSVRCVLPIIRHHHERWDGSGYPDG LSGSQIPFLARVLQVADIYDALTNPRPYKRTFSTARALEVLEEEVAKGWRDPDITGVFVGLHKRMLSKIADYHPGTSVPL ASMQDSLTHLQDFLTQ
Sequences:
>Translated_256_residues MDPTGEEEHVMATHGICKPATLLEPMRATAPTNPRTIDFTQTEHVLVSLAKIVEQRDKHTAGHCERLAIASVALGMAMKL ESSSLLALYLGGFLHDVGKVGIPDSILFKPGKLDDEEWEIMRAHPVRGEEICRPLLSVRCVLPIIRHHHERWDGSGYPDG LSGSQIPFLARVLQVADIYDALTNPRPYKRTFSTARALEVLEEEVAKGWRDPDITGVFVGLHKRMLSKIADYHPGTSVPL ASMQDSLTHLQDFLTQ >Mature_256_residues MDPTGEEEHVMATHGICKPATLLEPMRATAPTNPRTIDFTQTEHVLVSLAKIVEQRDKHTAGHCERLAIASVALGMAMKL ESSSLLALYLGGFLHDVGKVGIPDSILFKPGKLDDEEWEIMRAHPVRGEEICRPLLSVRCVLPIIRHHHERWDGSGYPDG LSGSQIPFLARVLQVADIYDALTNPRPYKRTFSTARALEVLEEEVAKGWRDPDITGVFVGLHKRMLSKIADYHPGTSVPL ASMQDSLTHLQDFLTQ
Specific function: Unknown
COG id: COG3437
COG function: function code KT; Response regulator containing a CheY-like receiver domain and an HD-GYP domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HD domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR000160 - InterPro: IPR003607 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28442; Mature: 28442
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPTGEEEHVMATHGICKPATLLEPMRATAPTNPRTIDFTQTEHVLVSLAKIVEQRDKHT CCCCCCCCCEEHHCCCCCHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCC AGHCERLAIASVALGMAMKLESSSLLALYLGGFLHDVGKVGIPDSILFKPGKLDDEEWEI HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHEECCCCCCCHHHHH MRAHPVRGEEICRPLLSVRCVLPIIRHHHERWDGSGYPDGLSGSQIPFLARVLQVADIYD HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH ALTNPRPYKRTFSTARALEVLEEEVAKGWRDPDITGVFVGLHKRMLSKIADYHPGTSVPL HHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCH ASMQDSLTHLQDFLTQ HHHHHHHHHHHHHHCC >Mature Secondary Structure MDPTGEEEHVMATHGICKPATLLEPMRATAPTNPRTIDFTQTEHVLVSLAKIVEQRDKHT CCCCCCCCCEEHHCCCCCHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCC AGHCERLAIASVALGMAMKLESSSLLALYLGGFLHDVGKVGIPDSILFKPGKLDDEEWEI HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHEECCCCCCCHHHHH MRAHPVRGEEICRPLLSVRCVLPIIRHHHERWDGSGYPDGLSGSQIPFLARVLQVADIYD HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH ALTNPRPYKRTFSTARALEVLEEEVAKGWRDPDITGVFVGLHKRMLSKIADYHPGTSVPL HHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCH ASMQDSLTHLQDFLTQ HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]