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The map label for this gene is etfB [H]

Identifier: 116620289

GI number: 116620289

Start: 1435845

End: 1436618

Strand: Reverse

Name: etfB [H]

Synonym: Acid_1166

Alternate gene names: 116620289

Gene position: 1436618-1435845 (Counterclockwise)

Preceding gene: 116620290

Following gene: 116620288

Centisome position: 14.42

GC content: 62.14

Gene sequence:

>774_bases
ATGAAAATCGTGGTTGCGATCAAGCAGGTTCCGGCTCGCGATTCTCAATTGCGAATCGCCTCTTCGGGCAAGTGGATCGA
CGAAGAGGATCTCACGCATGAGATCAACGAGCCCGATGCATACGCTCTGGAAGAGGGGCTGCAGTTGAAGGAGAAACACG
GCGGGGAAGTGATCGCCCTCTGTTTCGGCCCGGCACGCGCCGCCCAGACCATTCGGGAAGCGCTGGCAAAGGGCGCCGAC
CGCGCCATCCACATCGAGGACGAGAACCCCGGCGGTTACGATCCGCTGTCAGCTGCGCGTCTGATGGCCGCCGCACTGAA
AGCGGAAGCGCCGGACCTGGTGCTGACCGGCCTGCAGAGCGACGATCTTGGCTACGGACAGACCGGCCCCATTCTGGCCG
AACTGCTCGGGCTGCCGCACGCCACCATCATCATGGAAGTGGAAAAGCAGGATGGCGGCATCCGCGTCAAGCGCGAGTTG
GAGGACGGCTGGTTTCAGCATGTGGAAATGCCGCTGCCGGCGCTGCTGACCATCCAATCCGGCATCAGCAAACTGCGCTA
CGCGACCCTGATGGGCATCAAGAAAGCCAAGACCAAGGAGATCAAGCGCGTGACGCCGGCGGAATTGGGCGCGTCCGGCG
GCGCTCCCAGCATTCTGTTGGATCGGGTCTACCTGCCGGAGCGCGCCAAGCAAACCCAGCTTTTCGACGGACCCCCGGCG
GAGGCTGCAGCCAAACTGGTGGAGAAATTGAAATTCGAGGCGCGGGTCATATGA

Upstream 100 bases:

>100_bases
ATATGCCTTGTCGAACAGTTTCGGGTTCGGCGGCACTAACGGCTGCCTTATTTTCAAGCGATACTCTGAGTAGTATCCGG
CATTAACTCCCAAAAATTTT

Downstream 100 bases:

>100_bases
GCATCCTGGTTGTGATGGAGCAGCGTGCGGGCGAGTGGAACCGCATGTCGTTTGAGACCCTGGCCGCCGCACAGCAGTTC
GCGCGAGAGCTTGGCACTAC

Product: electron transfer flavoprotein subunit beta

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MKIVVAIKQVPARDSQLRIASSGKWIDEEDLTHEINEPDAYALEEGLQLKEKHGGEVIALCFGPARAAQTIREALAKGAD
RAIHIEDENPGGYDPLSAARLMAAALKAEAPDLVLTGLQSDDLGYGQTGPILAELLGLPHATIIMEVEKQDGGIRVKREL
EDGWFQHVEMPLPALLTIQSGISKLRYATLMGIKKAKTKEIKRVTPAELGASGGAPSILLDRVYLPERAKQTQLFDGPPA
EAAAKLVEKLKFEARVI

Sequences:

>Translated_257_residues
MKIVVAIKQVPARDSQLRIASSGKWIDEEDLTHEINEPDAYALEEGLQLKEKHGGEVIALCFGPARAAQTIREALAKGAD
RAIHIEDENPGGYDPLSAARLMAAALKAEAPDLVLTGLQSDDLGYGQTGPILAELLGLPHATIIMEVEKQDGGIRVKREL
EDGWFQHVEMPLPALLTIQSGISKLRYATLMGIKKAKTKEIKRVTPAELGASGGAPSILLDRVYLPERAKQTQLFDGPPA
EAAAKLVEKLKFEARVI
>Mature_257_residues
MKIVVAIKQVPARDSQLRIASSGKWIDEEDLTHEINEPDAYALEEGLQLKEKHGGEVIALCFGPARAAQTIREALAKGAD
RAIHIEDENPGGYDPLSAARLMAAALKAEAPDLVLTGLQSDDLGYGQTGPILAELLGLPHATIIMEVEKQDGGIRVKREL
EDGWFQHVEMPLPALLTIQSGISKLRYATLMGIKKAKTKEIKRVTPAELGASGGAPSILLDRVYLPERAKQTQLFDGPPA
EAAAKLVEKLKFEARVI

Specific function: The electron transfer flavoprotein of this bacterium serves as an electron acceptor specifically for trimethylamine dehydrogenase. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=262, Percent_Identity=34.3511450381679, Blast_Score=119, Evalue=3e-27,
Organism=Homo sapiens, GI62420877, Length=244, Percent_Identity=34.8360655737705, Blast_Score=113, Evalue=2e-25,
Organism=Escherichia coli, GI2367123, Length=254, Percent_Identity=25.9842519685039, Blast_Score=74, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI25141345, Length=214, Percent_Identity=35.0467289719626, Blast_Score=111, Evalue=3e-25,
Organism=Saccharomyces cerevisiae, GI6321646, Length=212, Percent_Identity=32.0754716981132, Blast_Score=94, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24651147, Length=214, Percent_Identity=34.5794392523364, Blast_Score=105, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24651145, Length=214, Percent_Identity=34.5794392523364, Blast_Score=105, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 27824; Mature: 27824

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIVVAIKQVPARDSQLRIASSGKWIDEEDLTHEINEPDAYALEEGLQLKEKHGGEVIAL
CEEEEEEECCCCCCCEEEEECCCCCCCHHHHHHCCCCCHHHHHHHCCHHHHHCCCCEEEE
CFGPARAAQTIREALAKGADRAIHIEDENPGGYDPLSAARLMAAALKAEAPDLVLTGLQS
EECCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCC
DDLGYGQTGPILAELLGLPHATIIMEVEKQDGGIRVKRELEDGWFQHVEMPLPALLTIQS
CCCCCCCCCHHHHHHHCCCCEEEEEEEECCCCCEEEEEEHHHHHHHHHCCCCHHHHHHHH
GISKLRYATLMGIKKAKTKEIKRVTPAELGASGGAPSILLDRVYLPERAKQTQLFDGPPA
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCH
EAAAKLVEKLKFEARVI
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKIVVAIKQVPARDSQLRIASSGKWIDEEDLTHEINEPDAYALEEGLQLKEKHGGEVIAL
CEEEEEEECCCCCCCEEEEECCCCCCCHHHHHHCCCCCHHHHHHHCCHHHHHCCCCEEEE
CFGPARAAQTIREALAKGADRAIHIEDENPGGYDPLSAARLMAAALKAEAPDLVLTGLQS
EECCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCC
DDLGYGQTGPILAELLGLPHATIIMEVEKQDGGIRVKRELEDGWFQHVEMPLPALLTIQS
CCCCCCCCCHHHHHHHCCCCEEEEEEEECCCCCEEEEEEHHHHHHHHHCCCCHHHHHHHH
GISKLRYATLMGIKKAKTKEIKRVTPAELGASGGAPSILLDRVYLPERAKQTQLFDGPPA
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCH
EAAAKLVEKLKFEARVI
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7798207; 12567183 [H]