| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620248
Identifier: 116620248
GI number: 116620248
Start: 1384197
End: 1385525
Strand: Reverse
Name: 116620248
Synonym: Acid_1125
Alternate gene names: NA
Gene position: 1385525-1384197 (Counterclockwise)
Preceding gene: 116620249
Following gene: 116620247
Centisome position: 13.9
GC content: 65.54
Gene sequence:
>1329_bases TTGCGCTCACCTAGGCCGCCATTCTTCTGGCTCCTAAACAAGGAATGCCGCGAGCTCATCGTCTCCCGCGCCTGGTGGGT GCTGCTGCTTTGCATGGGGCCGCTGGTCGGCGTCTCCTTCATCAGCGCCGTGCGCACCTATGGCGAGGTTAGCGGCCTCA ACGGAACCTCGGCCGGGGTCGGCGAAGCGCTCTCACCCTTGATCGGCGTGTGGGCCCCGACCTTCAGCGCCTGCGAACTG GCCGCCGTCTTTCTTCTACCCTTCGTCGCCATCCGCCTGGTCGCGGGCGACCGGCAGTCCGGCTCGCTCAAACTCGAACT CCAGCAAGGGATGTCGCCTTTCGCGCGCATCACTGCGAAGGCGCTGGTACTACTCGCCGGCTGGGTCATCGCCATGCTGC CGCCCTTGAGCGCCATCTTCCTGTGGAAGAGTTACGGCGGCACGGTCTACGCGCCCGAAGTCATCACGCTCGCCTTCGGA CACCTGCTCAACGCCGGCCTCACCATTGCCCTGGCCGCCGCCATGTCCTCGCTCACCGAGCATCCCTCCACGGCTGCGAT CCTCACGCTCGGTGTCACGGTCGGCACCTGGATCGTCAACTTCTTCGGCGCTGTGCAGGGCGGCTGGTGGGAGCGCGCCG CCGGATTCACTCCCGCCGCCATGGTGGCGGAATTCCAGCACGGGCTGCTGCGCCTGGACACCACGCTGGTCGCCCTCGTC CTGATTCTCGCCGGGCTCGGCCTCTCCGCCATCTGGATGCGGCTCGGAACCGAGGTCAGCCGCCGCGCATACCAATCGGT CGCGCTCTGCCTCGCGGCGGCAGCCGGCATCTTCGCCTGCACTTTAATCAACGCTAGCTGGGATAGCTCCGAGAGCCGCG CCAACTCCTTTCCGGAGGCCGACGAAGTCGCGCTGCGCAAAATCCACGCGCCGTTGACGATCGAAGCCCACCTCGCACCC GAAGATCCGCGCCGCCTCGATCTGGAGCATCACGCGCTTTCCAAGCTGCGCCGCGTTATGCCGTCGGTGCAGGTGCGCTA CGTTTCCAATACCTCGATCGGATTATTCGAGCAGACCCGCGCCGGCTACGGCGAAATCTGGTACAACCTCGGCGGCCGCA AAAACATGAGCCGCATGACCACCGCCGAGGGCGTGCTCGAAGAGATCTACTCGCTCGCCGGAGTTTCCCCGCCCCAGGAA AATGAGGCGGAGATCTTTCGCGGCCACCCTCTAGCCGTCCCCGCAACCGGGGCCGGCACCGTTTTCTATGTCCTCTGGCC GGGACTGGTCCTGGCCGGCGGAATTCTCGCACGCAGGAGATTCAAATGA
Upstream 100 bases:
>100_bases AGCGGCCGCGTCTGCGGCGAAGGCACCGTCCCCGAACTCGCCGCCTTGGCGGCGGCGCAACACGCGTCCGTTCCGTCCGG CGATCTCGAAGAGGTATTCC
Downstream 100 bases:
>100_bases AGCCAATCACACGAACCGCGGCCCTTCTCTTTGCCTTGACCGCCTCCGCCTTCGCGGCGGACCACAAAGTCGATCTCAAG GCCGAACAGGTCGGCAAACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 442; Mature: 442
Protein sequence:
>442_residues MRSPRPPFFWLLNKECRELIVSRAWWVLLLCMGPLVGVSFISAVRTYGEVSGLNGTSAGVGEALSPLIGVWAPTFSACEL AAVFLLPFVAIRLVAGDRQSGSLKLELQQGMSPFARITAKALVLLAGWVIAMLPPLSAIFLWKSYGGTVYAPEVITLAFG HLLNAGLTIALAAAMSSLTEHPSTAAILTLGVTVGTWIVNFFGAVQGGWWERAAGFTPAAMVAEFQHGLLRLDTTLVALV LILAGLGLSAIWMRLGTEVSRRAYQSVALCLAAAAGIFACTLINASWDSSESRANSFPEADEVALRKIHAPLTIEAHLAP EDPRRLDLEHHALSKLRRVMPSVQVRYVSNTSIGLFEQTRAGYGEIWYNLGGRKNMSRMTTAEGVLEEIYSLAGVSPPQE NEAEIFRGHPLAVPATGAGTVFYVLWPGLVLAGGILARRRFK
Sequences:
>Translated_442_residues MRSPRPPFFWLLNKECRELIVSRAWWVLLLCMGPLVGVSFISAVRTYGEVSGLNGTSAGVGEALSPLIGVWAPTFSACEL AAVFLLPFVAIRLVAGDRQSGSLKLELQQGMSPFARITAKALVLLAGWVIAMLPPLSAIFLWKSYGGTVYAPEVITLAFG HLLNAGLTIALAAAMSSLTEHPSTAAILTLGVTVGTWIVNFFGAVQGGWWERAAGFTPAAMVAEFQHGLLRLDTTLVALV LILAGLGLSAIWMRLGTEVSRRAYQSVALCLAAAAGIFACTLINASWDSSESRANSFPEADEVALRKIHAPLTIEAHLAP EDPRRLDLEHHALSKLRRVMPSVQVRYVSNTSIGLFEQTRAGYGEIWYNLGGRKNMSRMTTAEGVLEEIYSLAGVSPPQE NEAEIFRGHPLAVPATGAGTVFYVLWPGLVLAGGILARRRFK >Mature_442_residues MRSPRPPFFWLLNKECRELIVSRAWWVLLLCMGPLVGVSFISAVRTYGEVSGLNGTSAGVGEALSPLIGVWAPTFSACEL AAVFLLPFVAIRLVAGDRQSGSLKLELQQGMSPFARITAKALVLLAGWVIAMLPPLSAIFLWKSYGGTVYAPEVITLAFG HLLNAGLTIALAAAMSSLTEHPSTAAILTLGVTVGTWIVNFFGAVQGGWWERAAGFTPAAMVAEFQHGLLRLDTTLVALV LILAGLGLSAIWMRLGTEVSRRAYQSVALCLAAAAGIFACTLINASWDSSESRANSFPEADEVALRKIHAPLTIEAHLAP EDPRRLDLEHHALSKLRRVMPSVQVRYVSNTSIGLFEQTRAGYGEIWYNLGGRKNMSRMTTAEGVLEEIYSLAGVSPPQE NEAEIFRGHPLAVPATGAGTVFYVLWPGLVLAGGILARRRFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47597; Mature: 47597
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSPRPPFFWLLNKECRELIVSRAWWVLLLCMGPLVGVSFISAVRTYGEVSGLNGTSAGV CCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH GEALSPLIGVWAPTFSACELAAVFLLPFVAIRLVAGDRQSGSLKLELQQGMSPFARITAK HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHCCCHHHHHHHH ALVLLAGWVIAMLPPLSAIFLWKSYGGTVYAPEVITLAFGHLLNAGLTIALAAAMSSLTE HHHHHHHHHHHHHCHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHC HPSTAAILTLGVTVGTWIVNFFGAVQGGWWERAAGFTPAAMVAEFQHGLLRLDTTLVALV CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH LILAGLGLSAIWMRLGTEVSRRAYQSVALCLAAAAGIFACTLINASWDSSESRANSFPEA HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCH DEVALRKIHAPLTIEAHLAPEDPRRLDLEHHALSKLRRVMPSVQVRYVSNTSIGLFEQTR HHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHC AGYGEIWYNLGGRKNMSRMTTAEGVLEEIYSLAGVSPPQENEAEIFRGHPLAVPATGAGT CCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCEEECCCCCE VFYVLWPGLVLAGGILARRRFK EHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRSPRPPFFWLLNKECRELIVSRAWWVLLLCMGPLVGVSFISAVRTYGEVSGLNGTSAGV CCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH GEALSPLIGVWAPTFSACELAAVFLLPFVAIRLVAGDRQSGSLKLELQQGMSPFARITAK HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHCCCHHHHHHHH ALVLLAGWVIAMLPPLSAIFLWKSYGGTVYAPEVITLAFGHLLNAGLTIALAAAMSSLTE HHHHHHHHHHHHHCHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHC HPSTAAILTLGVTVGTWIVNFFGAVQGGWWERAAGFTPAAMVAEFQHGLLRLDTTLVALV CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH LILAGLGLSAIWMRLGTEVSRRAYQSVALCLAAAAGIFACTLINASWDSSESRANSFPEA HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCH DEVALRKIHAPLTIEAHLAPEDPRRLDLEHHALSKLRRVMPSVQVRYVSNTSIGLFEQTR HHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHC AGYGEIWYNLGGRKNMSRMTTAEGVLEEIYSLAGVSPPQENEAEIFRGHPLAVPATGAGT CCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCEEECCCCCE VFYVLWPGLVLAGGILARRRFK EHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA