| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620247
Identifier: 116620247
GI number: 116620247
Start: 1383412
End: 1384200
Strand: Reverse
Name: 116620247
Synonym: Acid_1124
Alternate gene names: NA
Gene position: 1384200-1383412 (Counterclockwise)
Preceding gene: 116620248
Following gene: 116620246
Centisome position: 13.89
GC content: 61.34
Gene sequence:
>789_bases ATGAAGCCAATCACACGAACCGCGGCCCTTCTCTTTGCCTTGACCGCCTCCGCCTTCGCGGCGGACCACAAAGTCGATCT CAAGGCCGAACAGGTCGGCAAACCGCCCGTAACCTTCGAGCCCATGGTCGGCACATGGGTAGTCGCCCAGGATGGTCCCG AGAAGGTCATCATGATCGATGGCCGTCCCTGGGTCGCCAGCAAGGATAACCCCACCAAGCTCTTGCTCCAGACCGCCCGC AAGCTATACGGCACTTCCAACGAAGAGCTGATGGACAACGCCAAACAGTTCGCCTATTATCCGGTCGCCGTGCTCAAAGG CGTGGACAACTTCTCCGACGGCACCATCACCATGAAGTTCAAAACCGTCGCCGGCGATTCCGACCGCTGCTCCGGCATTC TCTTCAACGTGAAGCCGAATGGCGACTGGCTCGCGGTCCGCTACAACGATACCGAGAACAACGTAGCGCTCTGGGAGTTC CACAACGGCATCCGCCGCAACATGAAATTCAGCGATCGCGCCAAGCCCTTCCCGCTCGATCGCGCCGCCTGGCACGAGTT GAAGCTCGTGGTCGATGGAGCCGACCTGAAGGCCTATCTCGATGGCGCCGCAGCCATCGAATACACCCTGGGCAGCGAGC CTCAGGCCGGCCGCCGCGGCCCGCCGAATGAGGACCTCTACCCGAAGAACAACCCGGTCCTCCGCCCGCCGGTCGCCGGC AAAGTCGGCCTCTGGTCCAAGACCGACAGCACCAGCTATTTCAAGGATTACGTCGTCAGTCCCAAGTAG
Upstream 100 bases:
>100_bases ACCCTCTAGCCGTCCCCGCAACCGGGGCCGGCACCGTTTTCTATGTCCTCTGGCCGGGACTGGTCCTGGCCGGCGGAATT CTCGCACGCAGGAGATTCAA
Downstream 100 bases:
>100_bases GACAGGCCGCCTGGCCTGTCCGATAATTCTATTTTTTTCTTGAGCCGATTCCCCGCGGTTTCCTGCGTTCTTATGCATGA AGCGCACTTGCCTGTTATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MKPITRTAALLFALTASAFAADHKVDLKAEQVGKPPVTFEPMVGTWVVAQDGPEKVIMIDGRPWVASKDNPTKLLLQTAR KLYGTSNEELMDNAKQFAYYPVAVLKGVDNFSDGTITMKFKTVAGDSDRCSGILFNVKPNGDWLAVRYNDTENNVALWEF HNGIRRNMKFSDRAKPFPLDRAAWHELKLVVDGADLKAYLDGAAAIEYTLGSEPQAGRRGPPNEDLYPKNNPVLRPPVAG KVGLWSKTDSTSYFKDYVVSPK
Sequences:
>Translated_262_residues MKPITRTAALLFALTASAFAADHKVDLKAEQVGKPPVTFEPMVGTWVVAQDGPEKVIMIDGRPWVASKDNPTKLLLQTAR KLYGTSNEELMDNAKQFAYYPVAVLKGVDNFSDGTITMKFKTVAGDSDRCSGILFNVKPNGDWLAVRYNDTENNVALWEF HNGIRRNMKFSDRAKPFPLDRAAWHELKLVVDGADLKAYLDGAAAIEYTLGSEPQAGRRGPPNEDLYPKNNPVLRPPVAG KVGLWSKTDSTSYFKDYVVSPK >Mature_262_residues MKPITRTAALLFALTASAFAADHKVDLKAEQVGKPPVTFEPMVGTWVVAQDGPEKVIMIDGRPWVASKDNPTKLLLQTAR KLYGTSNEELMDNAKQFAYYPVAVLKGVDNFSDGTITMKFKTVAGDSDRCSGILFNVKPNGDWLAVRYNDTENNVALWEF HNGIRRNMKFSDRAKPFPLDRAAWHELKLVVDGADLKAYLDGAAAIEYTLGSEPQAGRRGPPNEDLYPKNNPVLRPPVAG KVGLWSKTDSTSYFKDYVVSPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28994; Mature: 28994
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPITRTAALLFALTASAFAADHKVDLKAEQVGKPPVTFEPMVGTWVVAQDGPEKVIMID CCCHHHHHHHHHHHHHHHHHCCCEEECCHHHCCCCCCEECCCCEEEEEECCCCCEEEEEC GRPWVASKDNPTKLLLQTARKLYGTSNEELMDNAKQFAYYPVAVLKGVDNFSDGTITMKF CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE KTVAGDSDRCSGILFNVKPNGDWLAVRYNDTENNVALWEFHNGIRRNMKFSDRAKPFPLD EEECCCCCCCCEEEEEECCCCCEEEEEECCCCCCEEEEEECCHHHHCCCCCCCCCCCCCC RAAWHELKLVVDGADLKAYLDGAAAIEYTLGSEPQAGRRGPPNEDLYPKNNPVLRPPVAG CCCCEEEEEEEECCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCC KVGLWSKTDSTSYFKDYVVSPK CCCCCCCCCCCHHHHHEECCCC >Mature Secondary Structure MKPITRTAALLFALTASAFAADHKVDLKAEQVGKPPVTFEPMVGTWVVAQDGPEKVIMID CCCHHHHHHHHHHHHHHHHHCCCEEECCHHHCCCCCCEECCCCEEEEEECCCCCEEEEEC GRPWVASKDNPTKLLLQTARKLYGTSNEELMDNAKQFAYYPVAVLKGVDNFSDGTITMKF CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE KTVAGDSDRCSGILFNVKPNGDWLAVRYNDTENNVALWEFHNGIRRNMKFSDRAKPFPLD EEECCCCCCCCEEEEEECCCCCEEEEEECCCCCCEEEEEECCHHHHCCCCCCCCCCCCCC RAAWHELKLVVDGADLKAYLDGAAAIEYTLGSEPQAGRRGPPNEDLYPKNNPVLRPPVAG CCCCEEEEEEEECCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCC KVGLWSKTDSTSYFKDYVVSPK CCCCCCCCCCCHHHHHEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA