Click here to switch to the map view.

The map label for this gene is glgC [H]

Identifier: 116620228

GI number: 116620228

Start: 1357559

End: 1358815

Strand: Direct

Name: glgC [H]

Synonym: Acid_1105

Alternate gene names: 116620228

Gene position: 1357559-1358815 (Clockwise)

Preceding gene: 116620226

Following gene: 116620229

Centisome position: 13.62

GC content: 60.38

Gene sequence:

>1257_bases
ATGCGGATCCGCGTGTTGGGCATTGTACTCGCCGGCGGTAAGGGAACCCGGCTCTCTCCGCTCACCAGGGAACGGGCCAA
GCCGGCCGTCCCATTCGGCGGCAAATACCGAATCATCGATTTCGTCCTGAGTAACTTTATTAACTCGGGAATCTACTCGA
TTTATGTGCTGACTCAGTTCCGCAGCCAATCGCTGCTCCAACACCTCGCTGAAGGCTGGCAGTTTGGCTCACTGCTCAAA
AATCAATTCGTCATTCCCGTGCCCGCGCAAATGCGCTCCGAAGATGAAACCTGGTACCAGGGCACCGCCGACGCCATCTA
CCAGAACATCAACCTCGTCGAACAGGCCGACCCCCACGTCGTCGCGATCTTCGGTGGCGATCATATCTATCGCATGAACA
TCGCGAGTATGATCGAGTACCACGTCGCTAAAGCCGCCGAGGTCACCATCGCCGCCATCCCCATGCCCAAGAAACACGCC
GACGAATTCGGCGTCATTGAGGCCGCGGACGACGACCGCATCCTCGGCTTCCATGAGAAAAATCCCGACGCGCCCACCAT
GCCCGGCGATCCTGACCAGGTCTATGCCTCCATGGGCAACTACATCTTCTCCACCCGCACTTTGCTCAGCCTTCTCGAAG
AAGACTCCAAGCTCCCCCACAGCCATCACGATTTCGGCAAGGACATCCTACCCAGACTCGCCGGCAAGGGCCGCATGTAC
GCATACAACTTCGAAACCAACCGCATCCCCGGCGAACCGGCCGATGCCTCTCCCTACTGGCGCGATGTCGGTACCATCGA
GGCCTACTACGAAGCCAACATGGACCTGCGCTACGTCAGCCCCGCGCTCAACCTTTACAACCGCGAATGGCCCCTGCGCA
GCACCAGCTACTCCGATCCCCCCGCCAAGTTCACCTTCGACGACGCCAACCGCCGCGGCCAAGCCATCGATAGCATCGTT
TCCGGCGGCTGCATCCTCTCCGGCGGCGTGGTGCGCAACTCCGTCCTCGGCCGCGGTGTCCGCGTCCATGCCGGAGCCAT
GGTCGAAGATTCCGTCATTCTCGACAACTGCGACATCGGCCGCCGCGCCAAGATCCGCCGCGCCATCCTCGACAAGAACG
TCCGCGTCGCCGAGGACGCCATGATCGGCTACGATCTCGAAGTCGATCGCGCCAAAGGCTATCACGTCACCGAAACCGGA
ATCGTCGTAGTCGGCGGCGAACGCAGCCAGGTCGATATCACCGGCTTAGTCGTTTAA

Upstream 100 bases:

>100_bases
CGAATCTCATCTCTACATCGTAATGAGCGCTCCCCTCCGAAACTCACACTTTCCCCTTGCCAGAACCTCGCGCGCCCTGA
AACAATGGGCCTGAAAACTT

Downstream 100 bases:

>100_bases
TGCCCGTGATCTCCGATCCTTTGCAGGCCCCAAAAAAACTGCCGTCCCGATCAGCACTTTCTCGCAGAGCACGCAGAGAT
CTCAAAGAAAACCAAGGACG

Product: glucose-1-phosphate adenylyltransferase

Products: NA

Alternate protein names: ADP-glucose pyrophosphorylase; ADPGlc PPase; ADP-glucose synthase [H]

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MRIRVLGIVLAGGKGTRLSPLTRERAKPAVPFGGKYRIIDFVLSNFINSGIYSIYVLTQFRSQSLLQHLAEGWQFGSLLK
NQFVIPVPAQMRSEDETWYQGTADAIYQNINLVEQADPHVVAIFGGDHIYRMNIASMIEYHVAKAAEVTIAAIPMPKKHA
DEFGVIEAADDDRILGFHEKNPDAPTMPGDPDQVYASMGNYIFSTRTLLSLLEEDSKLPHSHHDFGKDILPRLAGKGRMY
AYNFETNRIPGEPADASPYWRDVGTIEAYYEANMDLRYVSPALNLYNREWPLRSTSYSDPPAKFTFDDANRRGQAIDSIV
SGGCILSGGVVRNSVLGRGVRVHAGAMVEDSVILDNCDIGRRAKIRRAILDKNVRVAEDAMIGYDLEVDRAKGYHVTETG
IVVVGGERSQVDITGLVV

Sequences:

>Translated_418_residues
MRIRVLGIVLAGGKGTRLSPLTRERAKPAVPFGGKYRIIDFVLSNFINSGIYSIYVLTQFRSQSLLQHLAEGWQFGSLLK
NQFVIPVPAQMRSEDETWYQGTADAIYQNINLVEQADPHVVAIFGGDHIYRMNIASMIEYHVAKAAEVTIAAIPMPKKHA
DEFGVIEAADDDRILGFHEKNPDAPTMPGDPDQVYASMGNYIFSTRTLLSLLEEDSKLPHSHHDFGKDILPRLAGKGRMY
AYNFETNRIPGEPADASPYWRDVGTIEAYYEANMDLRYVSPALNLYNREWPLRSTSYSDPPAKFTFDDANRRGQAIDSIV
SGGCILSGGVVRNSVLGRGVRVHAGAMVEDSVILDNCDIGRRAKIRRAILDKNVRVAEDAMIGYDLEVDRAKGYHVTETG
IVVVGGERSQVDITGLVV
>Mature_418_residues
MRIRVLGIVLAGGKGTRLSPLTRERAKPAVPFGGKYRIIDFVLSNFINSGIYSIYVLTQFRSQSLLQHLAEGWQFGSLLK
NQFVIPVPAQMRSEDETWYQGTADAIYQNINLVEQADPHVVAIFGGDHIYRMNIASMIEYHVAKAAEVTIAAIPMPKKHA
DEFGVIEAADDDRILGFHEKNPDAPTMPGDPDQVYASMGNYIFSTRTLLSLLEEDSKLPHSHHDFGKDILPRLAGKGRMY
AYNFETNRIPGEPADASPYWRDVGTIEAYYEANMDLRYVSPALNLYNREWPLRSTSYSDPPAKFTFDDANRRGQAIDSIV
SGGCILSGGVVRNSVLGRGVRVHAGAMVEDSVILDNCDIGRRAKIRRAILDKNVRVAEDAMIGYDLEVDRAKGYHVTETG
IVVVGGERSQVDITGLVV

Specific function: Glycogen biosynthesis; first step. [C]

COG id: COG0448

COG function: function code G; ADP-glucose pyrophosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family [H]

Homologues:

Organism=Escherichia coli, GI1789837, Length=405, Percent_Identity=45.1851851851852, Blast_Score=380, Evalue=1e-106,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005836
- InterPro:   IPR011831
- InterPro:   IPR023049
- InterPro:   IPR005835
- InterPro:   IPR011004 [H]

Pfam domain/function: PF00483 NTP_transferase [H]

EC number: =2.7.7.27 [H]

Molecular weight: Translated: 46365; Mature: 46365

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: PS00808 ADP_GLC_PYROPHOSPH_1 ; PS00809 ADP_GLC_PYROPHOSPH_2 ; PS00810 ADP_GLC_PYROPHOSPH_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIRVLGIVLAGGKGTRLSPLTRERAKPAVPFGGKYRIIDFVLSNFINSGIYSIYVLTQF
CEEEEEEEEEECCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEHH
RSQSLLQHLAEGWQFGSLLKNQFVIPVPAQMRSEDETWYQGTADAIYQNINLVEQADPHV
HHHHHHHHHHHCCHHHHHHHCCEEEECCHHHCCCCCHHHCCCHHHHHHCCCCEECCCCCE
VAIFGGDHIYRMNIASMIEYHVAKAAEVTIAAIPMPKKHADEFGVIEAADDDRILGFHEK
EEEECCCEEEEECHHHHHHHHHHHHCEEEEEEECCCHHCCCCCCEEEECCCCCEEEEECC
NPDAPTMPGDPDQVYASMGNYIFSTRTLLSLLEEDSKLPHSHHDFGKDILPRLAGKGRMY
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEE
AYNFETNRIPGEPADASPYWRDVGTIEAYYEANMDLRYVSPALNLYNREWPLRSTSYSDP
EEECCCCCCCCCCCCCCCCHHCCCCEEEEEECCCCEEEECHHHHHHCCCCCCCCCCCCCC
PAKFTFDDANRRGQAIDSIVSGGCILSGGVVRNSVLGRGVRVHAGAMVEDSVILDNCDIG
CCEEEECCCCCCHHHHHHHHCCCEEEECCHHHHHHHCCCEEEECCCEEECCEEEECCCCC
RRAKIRRAILDKNVRVAEDAMIGYDLEVDRAKGYHVTETGIVVVGGERSQVDITGLVV
CHHHHHHHHHCCCCEEECHHEEECCEEECCCCCEEEECCCEEEECCCCCEEEEEEEEC
>Mature Secondary Structure
MRIRVLGIVLAGGKGTRLSPLTRERAKPAVPFGGKYRIIDFVLSNFINSGIYSIYVLTQF
CEEEEEEEEEECCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEHH
RSQSLLQHLAEGWQFGSLLKNQFVIPVPAQMRSEDETWYQGTADAIYQNINLVEQADPHV
HHHHHHHHHHHCCHHHHHHHCCEEEECCHHHCCCCCHHHCCCHHHHHHCCCCEECCCCCE
VAIFGGDHIYRMNIASMIEYHVAKAAEVTIAAIPMPKKHADEFGVIEAADDDRILGFHEK
EEEECCCEEEEECHHHHHHHHHHHHCEEEEEEECCCHHCCCCCCEEEECCCCCEEEEECC
NPDAPTMPGDPDQVYASMGNYIFSTRTLLSLLEEDSKLPHSHHDFGKDILPRLAGKGRMY
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEE
AYNFETNRIPGEPADASPYWRDVGTIEAYYEANMDLRYVSPALNLYNREWPLRSTSYSDP
EEECCCCCCCCCCCCCCCCHHCCCCEEEEEECCCCEEEECHHHHHHCCCCCCCCCCCCCC
PAKFTFDDANRRGQAIDSIVSGGCILSGGVVRNSVLGRGVRVHAGAMVEDSVILDNCDIG
CCEEEECCCCCCHHHHHHHHCCCEEEECCHHHHHHHCCCEEEECCCEEECCEEEECCCCC
RRAKIRRAILDKNVRVAEDAMIGYDLEVDRAKGYHVTETGIVVVGGERSQVDITGLVV
CHHHHHHHHHCCCCEEECHHEEECCEEECCCCCEEEECCCEEEECCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA