Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

Click here to switch to the map view.

The map label for this gene is 116620226

Identifier: 116620226

GI number: 116620226

Start: 1356002

End: 1356535

Strand: Direct

Name: 116620226

Synonym: Acid_1103

Alternate gene names: NA

Gene position: 1356002-1356535 (Clockwise)

Preceding gene: 116620223

Following gene: 116620228

Centisome position: 13.61

GC content: 66.1

Gene sequence:

>534_bases
ATGAAGATCCCGATCCTCGCTCTCAGCCTTTTCGCCGTCGGCGCGTGGGCCCAGCCGCCCGCGCCCTCCGTCACCGAGCT
CAAAACGTATCTCTCCTTGACCGATGCGCAGGTCACGTCCCTCCAGACGATCCAGCAGAATCTGCATACCTCCACCGGCA
CCACCACGCAGCAGATTCAAACCAAGCAGCAGTCCCTGAACACCCAGCTCGCCGCCGGCGGTGCCACCGCCGCCGCCCTC
GGGCAACTCCTGCTCGATATCCAGACCCTGCGCAACTCCATCAAACAGGCGGAGACCGCATCGCAATCCCAATCCCTCAA
CGTATTGACCGCCGACCAGAAGACCAAGCTCAGCGTACTGACCGCCGCCTCCGCCCTGCGCATGCAGATCGATGAGGCCA
CCATGCTGGGTCTGATCGTTCCCCCTGCGAATTCCCAGGGCGGCGCCCCCGGAATGCGCGGACCCGCCGGCCGCGGCGGC
CCGCCCAGCATGGGCATGATGATGCGCCGCTCCGGCGGCGGCATCGACCAGTAG

Upstream 100 bases:

>100_bases
AAACCTTATTTTCCAGATGTTTAACTAACCTTCTCCGGGAAATGGGCGTTAATGAAAGTAGCCGGATCGAAACCGGCGCC
AACACACTAAGGAGAAGTCA

Downstream 100 bases:

>100_bases
ACTTTACTCCGAGCGCCGACGCCGGTAGCGCAGCACCTCCACCAGGAACGCGTCGCGTTCCGCTCGCACCGCGTCGGCGC
TCTTGATCCCCCAATCGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MKIPILALSLFAVGAWAQPPAPSVTELKTYLSLTDAQVTSLQTIQQNLHTSTGTTTQQIQTKQQSLNTQLAAGGATAAAL
GQLLLDIQTLRNSIKQAETASQSQSLNVLTADQKTKLSVLTAASALRMQIDEATMLGLIVPPANSQGGAPGMRGPAGRGG
PPSMGMMMRRSGGGIDQ

Sequences:

>Translated_177_residues
MKIPILALSLFAVGAWAQPPAPSVTELKTYLSLTDAQVTSLQTIQQNLHTSTGTTTQQIQTKQQSLNTQLAAGGATAAAL
GQLLLDIQTLRNSIKQAETASQSQSLNVLTADQKTKLSVLTAASALRMQIDEATMLGLIVPPANSQGGAPGMRGPAGRGG
PPSMGMMMRRSGGGIDQ
>Mature_177_residues
MKIPILALSLFAVGAWAQPPAPSVTELKTYLSLTDAQVTSLQTIQQNLHTSTGTTTQQIQTKQQSLNTQLAAGGATAAAL
GQLLLDIQTLRNSIKQAETASQSQSLNVLTADQKTKLSVLTAASALRMQIDEATMLGLIVPPANSQGGAPGMRGPAGRGG
PPSMGMMMRRSGGGIDQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18338; Mature: 18338

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIPILALSLFAVGAWAQPPAPSVTELKTYLSLTDAQVTSLQTIQQNLHTSTGTTTQQIQ
CCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
TKQQSLNTQLAAGGATAAALGQLLLDIQTLRNSIKQAETASQSQSLNVLTADQKTKLSVL
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHH
TAASALRMQIDEATMLGLIVPPANSQGGAPGMRGPAGRGGPPSMGMMMRRSGGGIDQ
HHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCC
>Mature Secondary Structure
MKIPILALSLFAVGAWAQPPAPSVTELKTYLSLTDAQVTSLQTIQQNLHTSTGTTTQQIQ
CCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
TKQQSLNTQLAAGGATAAALGQLLLDIQTLRNSIKQAETASQSQSLNVLTADQKTKLSVL
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHH
TAASALRMQIDEATMLGLIVPPANSQGGAPGMRGPAGRGGPPSMGMMMRRSGGGIDQ
HHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA