| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620158
Identifier: 116620158
GI number: 116620158
Start: 1275889
End: 1276260
Strand: Direct
Name: 116620158
Synonym: Acid_1031
Alternate gene names: NA
Gene position: 1275889-1276260 (Clockwise)
Preceding gene: 116620156
Following gene: 116620159
Centisome position: 12.8
GC content: 58.33
Gene sequence:
>372_bases ATGCGACGGCGAAGCACCACCTTGACCGAGCAGGAACTGGAGATCATGAAGATCGTCTGGGAGCGTGAAAGCGCGACTGT GCGCGACGTCTATGAGACGTTGCTCGAACAGCGCAAGGTCGCCTACACCACCGTGATGACCATGATGAAGATCCTGGAAC AGAAGAAATATCTCAAGAAAACCCAGGCCGACCGCGCCTACGTCTATCGCCCCACCGAGCCCAAGGGCAAGGTCATCGGC GATATGGTCCGCGACTTCGTCAACCGTGTTTTCAACGGCTCGGCCGAGCCCCTGCTGGTGCACCTGGTCGAAGAGCACGA TCTCTCTCCGGAAGAACTCGACGAGATCGCGCGCATACGGAGGAAGCCATGA
Upstream 100 bases:
>100_bases AAATCGCAAAGTGTGTTGTTCCGGGGTTTCCGGCGGCAGCATCGACATCAGTTCTTATTTTCCCCTTGACATCTTCTCTT TTTAGTACTAATTAATTAGT
Downstream 100 bases:
>100_bases GCACCCATCTCATCTGGGACAACCTGGTGGCCTACAGCATGCAGATCGGCCTGCTGATCGGGCTCGCCGCGTTCGTTCCC GCATTGCTCCGCCTCAAAGT
Product: CopY family transcriptional regulator
Products: NA
Alternate protein names: CopY Family Transcriptional Regulator; Transcriptional Regulator; Penicillinase Repressor; Transcriptional Regulator BlaI/MecI/CopY Family; Beta-Lactamase Repressor; BlaI/MecI/CopY Family Transcriptional Regulator; Methicillin Resistance Regulatory Protein MecI; Transcriptional Repressor Copy Family; Transcription Regulator BlaI; Transcriptional Regulator TrmB; Transcriptional Repressor CopY; MarR Family Transcriptional Regulator; BlaI Family Transcriptional Regulator; MarR Family Transcriptional Regulatory Protein
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MRRRSTTLTEQELEIMKIVWERESATVRDVYETLLEQRKVAYTTVMTMMKILEQKKYLKKTQADRAYVYRPTEPKGKVIG DMVRDFVNRVFNGSAEPLLVHLVEEHDLSPEELDEIARIRRKP
Sequences:
>Translated_123_residues MRRRSTTLTEQELEIMKIVWERESATVRDVYETLLEQRKVAYTTVMTMMKILEQKKYLKKTQADRAYVYRPTEPKGKVIG DMVRDFVNRVFNGSAEPLLVHLVEEHDLSPEELDEIARIRRKP >Mature_123_residues MRRRSTTLTEQELEIMKIVWERESATVRDVYETLLEQRKVAYTTVMTMMKILEQKKYLKKTQADRAYVYRPTEPKGKVIG DMVRDFVNRVFNGSAEPLLVHLVEEHDLSPEELDEIARIRRKP
Specific function: Unknown
COG id: COG3682
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14612; Mature: 14612
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRRSTTLTEQELEIMKIVWERESATVRDVYETLLEQRKVAYTTVMTMMKILEQKKYLKK CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TQADRAYVYRPTEPKGKVIGDMVRDFVNRVFNGSAEPLLVHLVEEHDLSPEELDEIARIR HCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHH RKP CCC >Mature Secondary Structure MRRRSTTLTEQELEIMKIVWERESATVRDVYETLLEQRKVAYTTVMTMMKILEQKKYLKK CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TQADRAYVYRPTEPKGKVIGDMVRDFVNRVFNGSAEPLLVHLVEEHDLSPEELDEIARIR HCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHH RKP CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA