| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is hemH [H]
Identifier: 116620156
GI number: 116620156
Start: 1273221
End: 1274180
Strand: Direct
Name: hemH [H]
Synonym: Acid_1029
Alternate gene names: 116620156
Gene position: 1273221-1274180 (Clockwise)
Preceding gene: 116620155
Following gene: 116620158
Centisome position: 12.78
GC content: 68.23
Gene sequence:
>960_bases ATGCATTACGATGCCATTCTGTTCGTGTCCTTCGGCGGCCCCGAAAAGGTCGCCGATGTCATCCCCTTCCTGGAGAACGT CCTCCGCGGGCGCAACGTGCCCCGCGAGCGCATGCTCCAGGTTGCCGAGCACTACTACCACTTCGGCGGCCGCAGCCCCA TAAACGACCAGTGCCGCGACCTGATTGCCGCCCTGCGCCCCGCCATCGACCTTCCCATCTACTGGGGCAATCGCAACTGG CATCCCCTGCTCGCCGATACCATGCGCCAGATGGCCGCCGACGGAGTCCGCCGCGCCCTCGCCATCGCCACCTCGGCGTA TTCCTCTTACTCCGGATGCCGCCAGTACATCGAGAACCTCGCTTGCGCGAGCGCGGCCGCCGGCCCCAACGCTCCCGCGA TCGACAAGCTCCCGCCATTCTGGAATCAACCTGGTTTCGTCGAGGCGAATGCGGATCGCGTGTCCGACGCCCTCGCCCGC CTCCCGCATGATCGCCGCGACGCAGCGCGCCTGGTCTTTACCGCGCACAGCATCCCGCTCGCCATGGCCACCACCTGCCG CTACGAGGAGCAACTCGTCGAAACCGCCCGGGCCGTCGCCGCCCGCATCGCCCACGACGAGTGGGATCTCGTCTGGCAGA GCCGCAGCGGTCCTCCGACGCAGCCCTGGCTCGAGCCCGACATCCTGGACCACCTCCGCGCGCTGGCCGAAAACGGCGTC CGCGACGTGATCGTTTCCCCCATCGGCTTCCTCAGCGACCACATGGAAGTCCTGTACGATCTCGACGAAGAGGCCGCCGC TCTCGCTCGCGAACTCGGCCTCAATTTCATCCGCGCCGCCACCGCCGGCACACACGCCGCCGTGATCGCGATGCTCGCCG ACCTGATCGCGCGGCGTCAGGCCTCGCCCGAAACTCCGCTCTGCGCGCCCGATTGCTGCCCCGCGCTGCGCCGGCCCTGA
Upstream 100 bases:
>100_bases CGAGGCGCCCTCCTGCCCCAGCGGACGCTGCGGCAATCCGGGCATGTGCGGAATGAATTTTAACTAGCCGCGACACGCCG GCTGGCATCCAATTTCTTCC
Downstream 100 bases:
>100_bases GCCTCACGTACCGGCCAGAACCTGGTGGACGAACTGCACCGCCATCGATCCTTCTCCCACTGCCGAGGCCACGCGCTTGA TGCTGTTCGCCCGTATATCG
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase [H]
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MHYDAILFVSFGGPEKVADVIPFLENVLRGRNVPRERMLQVAEHYYHFGGRSPINDQCRDLIAALRPAIDLPIYWGNRNW HPLLADTMRQMAADGVRRALAIATSAYSSYSGCRQYIENLACASAAAGPNAPAIDKLPPFWNQPGFVEANADRVSDALAR LPHDRRDAARLVFTAHSIPLAMATTCRYEEQLVETARAVAARIAHDEWDLVWQSRSGPPTQPWLEPDILDHLRALAENGV RDVIVSPIGFLSDHMEVLYDLDEEAAALARELGLNFIRAATAGTHAAVIAMLADLIARRQASPETPLCAPDCCPALRRP
Sequences:
>Translated_319_residues MHYDAILFVSFGGPEKVADVIPFLENVLRGRNVPRERMLQVAEHYYHFGGRSPINDQCRDLIAALRPAIDLPIYWGNRNW HPLLADTMRQMAADGVRRALAIATSAYSSYSGCRQYIENLACASAAAGPNAPAIDKLPPFWNQPGFVEANADRVSDALAR LPHDRRDAARLVFTAHSIPLAMATTCRYEEQLVETARAVAARIAHDEWDLVWQSRSGPPTQPWLEPDILDHLRALAENGV RDVIVSPIGFLSDHMEVLYDLDEEAAALARELGLNFIRAATAGTHAAVIAMLADLIARRQASPETPLCAPDCCPALRRP >Mature_319_residues MHYDAILFVSFGGPEKVADVIPFLENVLRGRNVPRERMLQVAEHYYHFGGRSPINDQCRDLIAALRPAIDLPIYWGNRNW HPLLADTMRQMAADGVRRALAIATSAYSSYSGCRQYIENLACASAAAGPNAPAIDKLPPFWNQPGFVEANADRVSDALAR LPHDRRDAARLVFTAHSIPLAMATTCRYEEQLVETARAVAARIAHDEWDLVWQSRSGPPTQPWLEPDILDHLRALAENGV RDVIVSPIGFLSDHMEVLYDLDEEAAALARELGLNFIRAATAGTHAAVIAMLADLIARRQASPETPLCAPDCCPALRRP
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
Organism=Homo sapiens, GI60499025, Length=363, Percent_Identity=27.5482093663912, Blast_Score=122, Evalue=5e-28, Organism=Homo sapiens, GI60499021, Length=363, Percent_Identity=27.5482093663912, Blast_Score=122, Evalue=5e-28, Organism=Saccharomyces cerevisiae, GI6324750, Length=321, Percent_Identity=25.2336448598131, Blast_Score=100, Evalue=4e-22, Organism=Drosophila melanogaster, GI17864156, Length=346, Percent_Identity=26.3005780346821, Blast_Score=104, Evalue=6e-23, Organism=Drosophila melanogaster, GI45552018, Length=184, Percent_Identity=30.9782608695652, Blast_Score=89, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 35232; Mature: 35232
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHYDAILFVSFGGPEKVADVIPFLENVLRGRNVPRERMLQVAEHYYHFGGRSPINDQCRD CCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHH LIAALRPAIDLPIYWGNRNWHPLLADTMRQMAADGVRRALAIATSAYSSYSGCRQYIENL HHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ACASAAAGPNAPAIDKLPPFWNQPGFVEANADRVSDALARLPHDRRDAARLVFTAHSIPL HHHHHCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCH AMATTCRYEEQLVETARAVAARIAHDEWDLVWQSRSGPPTQPWLEPDILDHLRALAENGV HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHCCH RDVIVSPIGFLSDHMEVLYDLDEEAAALARELGLNFIRAATAGTHAAVIAMLADLIARRQ HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC ASPETPLCAPDCCPALRRP CCCCCCCCCCHHCCCCCCC >Mature Secondary Structure MHYDAILFVSFGGPEKVADVIPFLENVLRGRNVPRERMLQVAEHYYHFGGRSPINDQCRD CCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHH LIAALRPAIDLPIYWGNRNWHPLLADTMRQMAADGVRRALAIATSAYSSYSGCRQYIENL HHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ACASAAAGPNAPAIDKLPPFWNQPGFVEANADRVSDALARLPHDRRDAARLVFTAHSIPL HHHHHCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCH AMATTCRYEEQLVETARAVAARIAHDEWDLVWQSRSGPPTQPWLEPDILDHLRALAENGV HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHCCH RDVIVSPIGFLSDHMEVLYDLDEEAAALARELGLNFIRAATAGTHAAVIAMLADLIARRQ HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC ASPETPLCAPDCCPALRRP CCCCCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12835416 [H]