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The map label for this gene is pehX [H]

Identifier: 116619802

GI number: 116619802

Start: 842254

End: 843861

Strand: Direct

Name: pehX [H]

Synonym: Acid_0672

Alternate gene names: 116619802

Gene position: 842254-843861 (Clockwise)

Preceding gene: 116619801

Following gene: 116619803

Centisome position: 8.45

GC content: 63.56

Gene sequence:

>1608_bases
ATGACCTCGCAAAATACCATGAGAAACCTGGCAATCCTTATCCTCGCGGCGGCACCCGGTTGGGCCGCGGCCGGCGAGCA
CTTCAACATCCTGGATTACGGCGCAAAGAACGATGGCTCCGCGCCGGCCACGGGAGCCTTCCGCGCAGCCATTCAGGCCG
CGAAGGCGGCGGGCGGTGGAACCGTCTTTGTGCCCGCGGGCAAGTACACCACCGGGCCCATCGAACTGGTCAGCAACCTG
GTGCTCTATTTCGACGCCGGAGCGGTGGTCGAGTTTCCGGCGCAGCGATTGCCTTTCGTGAAATCCCGGCAGCAGAGCAT
TGAGGCCCTGACTCCGGTGCCGCTCATCGGCGGCAGCAACCTGGAGAATGTCACGGTCGCCGGCCGCGGCGTGCTGAAGA
GCAACAACGAGGATTGGATGAAGCTGATGCCGCGGCAGAAGGCCACGACCGCCGACCCCGGCAGCGCCAACGGCCCCAAC
TGGGAAAAGCTACTCACCATGCTCGAGGTGAAGACGCCCGCGCCCGAGGCTGCATACCTCGCCGCCGCTCCCGAGCTCCG
CCCCTCTTTCGTGCGCACCATGGAAAGCCGCAACGTGCTGATCGAAGGACTGCAATTCGTCGGCTCGCCCATGTGGACCA
TCCATCTGCTCTATTCGGACAACGTGGTGGTGCGCGACGTGATCATCGAGACCTACCCCGGCGTGCACACCGACGGGATC
GCGGTAGATTCGAGCCGCAACGTGCGCATCTCCAACTGCTACATCGATACCGGCGACGATGGCATCGTCATCAAGGCCGG
CAAGGATAGCGACGGCCTGCGCGTCAACCGTCCCACCGAGAACGTCTCGATCACCAACTGCAGCGTCCACCACGCCCACG
GCGCGGTCACCATCGGCAGCGAGACTTCCGGCTGGGTCCGCAACCTGGTGGCCAGCAACATCACCTGCGACGGCACCCAA
ATGGGCGTGCGCATCAAGAGCCGGCGCGGCCGCGGAGGCGGAGTGGAAGACGTGCGCTTTGACAACTGGACCATGGAAAA
CGTCGGCACCGCCGTCAACATCACCAACTATTACCTGATGGAAGGCGAGAAGCCCGCTAATGATCCCGAGCCGGTCTCCA
ACCGTACGCCGGTCTTCCGCAACATCGCCATCAGCAACATGACCGTCAACCACGCCCGCGTCGCTATCGATATCGAGGGG
CTGCCGGAGATGAACGTCTCGAACCTGCGAATCAGCGACTTCATCGGCTCCGCCAAAACCGGCGTGAAGGCATACCATAC
CGATGGCCTGGAGCTGCATCATGTGCAGATCAACGCGGAGAGCGGACCGGCATTCCTGATCCGCGATTCCAAGGATCTGG
AGCTCGATGGCGTCTCCACGCGCAAGCCGCTCGCCGGTATGCCGGTGGTCCGGCTGGACCGTTGTCCCGGCGCAGTCGTC
CGAAACAGCCGCGTGTTTGCAAACACCGGCACGTTCCTCTCGGTGGGGGCCGGCGAGCTCAAGGGCGTAGCGCTCGAAGG
CAACGCGCTCGGGCGCGCCGAAAAGCCAACCGAAGAATCGGCAAAGACCTATACGCTCACGCCCGAGAGTCCCACCGAAA
AGCAGTAG

Upstream 100 bases:

>100_bases
ACCGGCTCGACAGTGCGCGTAAGCCAGCGGAGGAATCGGCGAAGAGTTATCCTATGCTTCCCGAATCGGCCACCGAGCGG
ACGTGGACGGAGAAGTATTG

Downstream 100 bases:

>100_bases
TCTGGGAAACATGTTCAGCGCCTCGGAAGCATCGACGAAAGCCGCACCGGGCAGGCTGCCGGGGGCGCTGTGGGGAGTAC
TGGCTCTATTGGTGATTTCG

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: Exo-PG [H]

Number of amino acids: Translated: 535; Mature: 534

Protein sequence:

>535_residues
MTSQNTMRNLAILILAAAPGWAAAGEHFNILDYGAKNDGSAPATGAFRAAIQAAKAAGGGTVFVPAGKYTTGPIELVSNL
VLYFDAGAVVEFPAQRLPFVKSRQQSIEALTPVPLIGGSNLENVTVAGRGVLKSNNEDWMKLMPRQKATTADPGSANGPN
WEKLLTMLEVKTPAPEAAYLAAAPELRPSFVRTMESRNVLIEGLQFVGSPMWTIHLLYSDNVVVRDVIIETYPGVHTDGI
AVDSSRNVRISNCYIDTGDDGIVIKAGKDSDGLRVNRPTENVSITNCSVHHAHGAVTIGSETSGWVRNLVASNITCDGTQ
MGVRIKSRRGRGGGVEDVRFDNWTMENVGTAVNITNYYLMEGEKPANDPEPVSNRTPVFRNIAISNMTVNHARVAIDIEG
LPEMNVSNLRISDFIGSAKTGVKAYHTDGLELHHVQINAESGPAFLIRDSKDLELDGVSTRKPLAGMPVVRLDRCPGAVV
RNSRVFANTGTFLSVGAGELKGVALEGNALGRAEKPTEESAKTYTLTPESPTEKQ

Sequences:

>Translated_535_residues
MTSQNTMRNLAILILAAAPGWAAAGEHFNILDYGAKNDGSAPATGAFRAAIQAAKAAGGGTVFVPAGKYTTGPIELVSNL
VLYFDAGAVVEFPAQRLPFVKSRQQSIEALTPVPLIGGSNLENVTVAGRGVLKSNNEDWMKLMPRQKATTADPGSANGPN
WEKLLTMLEVKTPAPEAAYLAAAPELRPSFVRTMESRNVLIEGLQFVGSPMWTIHLLYSDNVVVRDVIIETYPGVHTDGI
AVDSSRNVRISNCYIDTGDDGIVIKAGKDSDGLRVNRPTENVSITNCSVHHAHGAVTIGSETSGWVRNLVASNITCDGTQ
MGVRIKSRRGRGGGVEDVRFDNWTMENVGTAVNITNYYLMEGEKPANDPEPVSNRTPVFRNIAISNMTVNHARVAIDIEG
LPEMNVSNLRISDFIGSAKTGVKAYHTDGLELHHVQINAESGPAFLIRDSKDLELDGVSTRKPLAGMPVVRLDRCPGAVV
RNSRVFANTGTFLSVGAGELKGVALEGNALGRAEKPTEESAKTYTLTPESPTEKQ
>Mature_534_residues
TSQNTMRNLAILILAAAPGWAAAGEHFNILDYGAKNDGSAPATGAFRAAIQAAKAAGGGTVFVPAGKYTTGPIELVSNLV
LYFDAGAVVEFPAQRLPFVKSRQQSIEALTPVPLIGGSNLENVTVAGRGVLKSNNEDWMKLMPRQKATTADPGSANGPNW
EKLLTMLEVKTPAPEAAYLAAAPELRPSFVRTMESRNVLIEGLQFVGSPMWTIHLLYSDNVVVRDVIIETYPGVHTDGIA
VDSSRNVRISNCYIDTGDDGIVIKAGKDSDGLRVNRPTENVSITNCSVHHAHGAVTIGSETSGWVRNLVASNITCDGTQM
GVRIKSRRGRGGGVEDVRFDNWTMENVGTAVNITNYYLMEGEKPANDPEPVSNRTPVFRNIAISNMTVNHARVAIDIEGL
PEMNVSNLRISDFIGSAKTGVKAYHTDGLELHHVQINAESGPAFLIRDSKDLELDGVSTRKPLAGMPVVRLDRCPGAVVR
NSRVFANTGTFLSVGAGELKGVALEGNALGRAEKPTEESAKTYTLTPESPTEKQ

Specific function: Contributes significantly to bacterial utilization of polygalacturonate and the induction of pectate lyase in the presence of extracellular pectic polymers [H]

COG id: COG5434

COG function: function code M; Endopolygalacturonase

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 4 PbH1 repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008957
- InterPro:   IPR003961
- InterPro:   IPR000743
- InterPro:   IPR013783
- InterPro:   IPR006626
- InterPro:   IPR012334
- InterPro:   IPR011050 [H]

Pfam domain/function: PF00041 fn3; PF00295 Glyco_hydro_28 [H]

EC number: =3.2.1.82 [H]

Molecular weight: Translated: 57257; Mature: 57126

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSQNTMRNLAILILAAAPGWAAAGEHFNILDYGAKNDGSAPATGAFRAAIQAAKAAGGG
CCCHHHHHEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCC
TVFVPAGKYTTGPIELVSNLVLYFDAGAVVEFPAQRLPFVKSRQQSIEALTPVPLIGGSN
EEEEECCCCCCCHHHHHCCEEEEEECCCEEECCHHHCCHHHHHHHHHHHCCCCEEECCCC
LENVTVAGRGVLKSNNEDWMKLMPRQKATTADPGSANGPNWEKLLTMLEVKTPAPEAAYL
CCEEEEECCCEEECCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHEECCCCCCCEEE
AAAPELRPSFVRTMESRNVLIEGLQFVGSPMWTIHLLYSDNVVVRDVIIETYPGVHTDGI
EECCCCCHHHHHHHHHCHHHHHHHHHHCCCEEEEEEEECCCEEEEEEEECCCCCCCCCCE
AVDSSRNVRISNCYIDTGDDGIVIKAGKDSDGLRVNRPTENVSITNCSVHHAHGAVTIGS
EEECCCCEEEEEEEEECCCCEEEEEECCCCCCEEEECCCCCEEEEEEEEEECCCEEEECC
ETSGWVRNLVASNITCDGTQMGVRIKSRRGRGGGVEDVRFDNWTMENVGTAVNITNYYLM
CCCHHHHHHHHCCCEECCCEEEEEEEECCCCCCCCCCEEECCEEHHHCCCEEEEEEEEEE
EGEKPANDPEPVSNRTPVFRNIAISNMTVNHARVAIDIEGLPEMNVSNLRISDFIGSAKT
ECCCCCCCCCCCCCCCCEEEEEEEEEEEEECEEEEEEECCCCCCCCCCEEHHHHHCCCCC
GVKAYHTDGLELHHVQINAESGPAFLIRDSKDLELDGVSTRKPLAGMPVVRLDRCPGAVV
CCEEEECCCEEEEEEEEECCCCCEEEEECCCCCEECCCCCCCCCCCCCEEEEECCCCCEE
RNSRVFANTGTFLSVGAGELKGVALEGNALGRAEKPTEESAKTYTLTPESPTEKQ
ECCEEEEECCCEEEECCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCC
>Mature Secondary Structure 
TSQNTMRNLAILILAAAPGWAAAGEHFNILDYGAKNDGSAPATGAFRAAIQAAKAAGGG
CCHHHHHEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCC
TVFVPAGKYTTGPIELVSNLVLYFDAGAVVEFPAQRLPFVKSRQQSIEALTPVPLIGGSN
EEEEECCCCCCCHHHHHCCEEEEEECCCEEECCHHHCCHHHHHHHHHHHCCCCEEECCCC
LENVTVAGRGVLKSNNEDWMKLMPRQKATTADPGSANGPNWEKLLTMLEVKTPAPEAAYL
CCEEEEECCCEEECCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHEECCCCCCCEEE
AAAPELRPSFVRTMESRNVLIEGLQFVGSPMWTIHLLYSDNVVVRDVIIETYPGVHTDGI
EECCCCCHHHHHHHHHCHHHHHHHHHHCCCEEEEEEEECCCEEEEEEEECCCCCCCCCCE
AVDSSRNVRISNCYIDTGDDGIVIKAGKDSDGLRVNRPTENVSITNCSVHHAHGAVTIGS
EEECCCCEEEEEEEEECCCCEEEEEECCCCCCEEEECCCCCEEEEEEEEEECCCEEEECC
ETSGWVRNLVASNITCDGTQMGVRIKSRRGRGGGVEDVRFDNWTMENVGTAVNITNYYLM
CCCHHHHHHHHCCCEECCCEEEEEEEECCCCCCCCCCEEECCEEHHHCCCEEEEEEEEEE
EGEKPANDPEPVSNRTPVFRNIAISNMTVNHARVAIDIEGLPEMNVSNLRISDFIGSAKT
ECCCCCCCCCCCCCCCCEEEEEEEEEEEEECEEEEEEECCCCCCCCCCEEHHHHHCCCCC
GVKAYHTDGLELHHVQINAESGPAFLIRDSKDLELDGVSTRKPLAGMPVVRLDRCPGAVV
CCEEEECCCEEEEEEEEECCCCCEEEEECCCCCEECCCCCCCCCCCCCEEEEECCCCCEE
RNSRVFANTGTFLSVGAGELKGVALEGNALGRAEKPTEESAKTYTLTPESPTEKQ
ECCEEEEECCCEEEECCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2168372; 1409594 [H]