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The map label for this gene is pehX [H]

Identifier: 116619801

GI number: 116619801

Start: 840668

End: 842254

Strand: Direct

Name: pehX [H]

Synonym: Acid_0671

Alternate gene names: 116619801

Gene position: 840668-842254 (Clockwise)

Preceding gene: 116619800

Following gene: 116619802

Centisome position: 8.44

GC content: 62.76

Gene sequence:

>1587_bases
ATGGGCTTATTAAAACGCGGAGTGCTGGCGCTGTGGATCGGCGCGAGCGCCTGGGCCGCGGCGCCGGTCTTCAACATCGC
CGATTACGGCGCCCGCAAAGATGGATCGGCACTGGCCACTGAGGCCTTCCGCTCCGCCATTCAGGCCGCCAAAGCGGCCG
GTGGAGGAACGGTGTATGTGCCGGCCGGGCAGTACATCAGCGGCCCGATTGAGCTGGTGAGCAACCTGGTCCTCCACATC
GACGCGGGCGCGACCCTGCGCTTTCCTGCTACCAGGCTGCCCTTCTCACGCGGGCGCTGGCAAGGCATCGAAGCCCTCAC
GCCCGTGCCGCTCATCGGTGGAAGAAATCTGGAGAACGTCAGTATCACCGGCCGCGGCGTGCTGACCACTAGCCAGCCCG
AGTGGACCAGGATCATGGGCGACCCGGGCAGCGGCCCGGACTGGCTGCACCTGCTCGAGATCCTGGAATTGAAGAAGCCG
ATTCCCGACCAGGAATATCAAAAAGCCGCGCCCCAGCTGCTCCCGATGTTCATTTCCCTTATGGAATCGAAGAACGTGCT
GATCCAGGGGATCCACATCGTGGGCTCCGCGATGTGGCCCATACAGCTTGTCTACGACGATAACGCGGTGGTCAGTGGCG
TCATGGTGGAGACCTTCGGCGGCCACGATACCGGCGGCATCTATGTGGACTCCAGCCGCAATGTGCGCATCTCCGATTGC
TACATCGATACCGGCGACGACGGCATTGTGATCAAGTCCGGTAAAGATGCCGACGGCCGGCGCGTCAATCGTCCGGCCGA
GAACATCTCCATCACCAACTGCAACGTTCACCGGGCGCACGGCGCGGTGGTGCTGGGCAGCGAGATCTCCGGTTGGATTC
GCAACCTGGTGGCCAGCAATATCACCTGCGATGGCACTCAGATGGGCGTGCGCATCAAGACGCGGCGCGGCCGCGGCGGC
GGCATCGAGGATGTGCGCTTCGACAACTGGACTATGCAGAACGTGGCCCGCGGCATCAACATCTCCTCCTTCTACGTCAT
GGCGCCGGAAAACAAATCGACGCCGCCCGAGGAGCCCGTGTCGGAGCGCACCTCGATCTACCGCAACATCGCGATCAGCC
ACATGACCATCAACAACTCGCGCCTGGTGATCGATATCGAAGGCATTCCCGAGATGCCCATTGACGGCCTCCGGATCAGC
GACATCGTGGCCACCGCGCAAATCGGAATGAAAGCCTACAATACGAAGGCCATGGAACTGCACAACGTTCAACTCAGCGC
CAAGACCGGACCCGTCTTCCTGATCCGCGACTCCACGGACCTGGAACTCGACAATGTCGGCTCGCGCCGTCCGCTGGAAG
AGGCTCCCGTGGTCCGGCTGGATCACTGCCCGGGAGCGATCCTGCGCGGCAGCCGCGCCTTCGCCGGCACCGGCACGTTT
CTTTCGGTCGCCCCGGGAGAGCTGAAGGGCATCGTGATGGAAGGCAACCGGCTCGACAGTGCGCGTAAGCCAGCGGAGGA
ATCGGCGAAGAGTTATCCTATGCTTCCCGAATCGGCCACCGAGCGGACGTGGACGGAGAAGTATTGA

Upstream 100 bases:

>100_bases
TATCACCTCGTCCACGTTCGGCGCGCTCACGGCCGCCGCCGATCCGCGAATTCTGCAATTCGCTTTGAAGCTTCACTTCT
GACCGCATGGGAGGGCCTGA

Downstream 100 bases:

>100_bases
TGACCTCGCAAAATACCATGAGAAACCTGGCAATCCTTATCCTCGCGGCGGCACCCGGTTGGGCCGCGGCCGGCGAGCAC
TTCAACATCCTGGATTACGG

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: Exo-PG [H]

Number of amino acids: Translated: 528; Mature: 527

Protein sequence:

>528_residues
MGLLKRGVLALWIGASAWAAAPVFNIADYGARKDGSALATEAFRSAIQAAKAAGGGTVYVPAGQYISGPIELVSNLVLHI
DAGATLRFPATRLPFSRGRWQGIEALTPVPLIGGRNLENVSITGRGVLTTSQPEWTRIMGDPGSGPDWLHLLEILELKKP
IPDQEYQKAAPQLLPMFISLMESKNVLIQGIHIVGSAMWPIQLVYDDNAVVSGVMVETFGGHDTGGIYVDSSRNVRISDC
YIDTGDDGIVIKSGKDADGRRVNRPAENISITNCNVHRAHGAVVLGSEISGWIRNLVASNITCDGTQMGVRIKTRRGRGG
GIEDVRFDNWTMQNVARGINISSFYVMAPENKSTPPEEPVSERTSIYRNIAISHMTINNSRLVIDIEGIPEMPIDGLRIS
DIVATAQIGMKAYNTKAMELHNVQLSAKTGPVFLIRDSTDLELDNVGSRRPLEEAPVVRLDHCPGAILRGSRAFAGTGTF
LSVAPGELKGIVMEGNRLDSARKPAEESAKSYPMLPESATERTWTEKY

Sequences:

>Translated_528_residues
MGLLKRGVLALWIGASAWAAAPVFNIADYGARKDGSALATEAFRSAIQAAKAAGGGTVYVPAGQYISGPIELVSNLVLHI
DAGATLRFPATRLPFSRGRWQGIEALTPVPLIGGRNLENVSITGRGVLTTSQPEWTRIMGDPGSGPDWLHLLEILELKKP
IPDQEYQKAAPQLLPMFISLMESKNVLIQGIHIVGSAMWPIQLVYDDNAVVSGVMVETFGGHDTGGIYVDSSRNVRISDC
YIDTGDDGIVIKSGKDADGRRVNRPAENISITNCNVHRAHGAVVLGSEISGWIRNLVASNITCDGTQMGVRIKTRRGRGG
GIEDVRFDNWTMQNVARGINISSFYVMAPENKSTPPEEPVSERTSIYRNIAISHMTINNSRLVIDIEGIPEMPIDGLRIS
DIVATAQIGMKAYNTKAMELHNVQLSAKTGPVFLIRDSTDLELDNVGSRRPLEEAPVVRLDHCPGAILRGSRAFAGTGTF
LSVAPGELKGIVMEGNRLDSARKPAEESAKSYPMLPESATERTWTEKY
>Mature_527_residues
GLLKRGVLALWIGASAWAAAPVFNIADYGARKDGSALATEAFRSAIQAAKAAGGGTVYVPAGQYISGPIELVSNLVLHID
AGATLRFPATRLPFSRGRWQGIEALTPVPLIGGRNLENVSITGRGVLTTSQPEWTRIMGDPGSGPDWLHLLEILELKKPI
PDQEYQKAAPQLLPMFISLMESKNVLIQGIHIVGSAMWPIQLVYDDNAVVSGVMVETFGGHDTGGIYVDSSRNVRISDCY
IDTGDDGIVIKSGKDADGRRVNRPAENISITNCNVHRAHGAVVLGSEISGWIRNLVASNITCDGTQMGVRIKTRRGRGGG
IEDVRFDNWTMQNVARGINISSFYVMAPENKSTPPEEPVSERTSIYRNIAISHMTINNSRLVIDIEGIPEMPIDGLRISD
IVATAQIGMKAYNTKAMELHNVQLSAKTGPVFLIRDSTDLELDNVGSRRPLEEAPVVRLDHCPGAILRGSRAFAGTGTFL
SVAPGELKGIVMEGNRLDSARKPAEESAKSYPMLPESATERTWTEKY

Specific function: Contributes significantly to bacterial utilization of polygalacturonate and the induction of pectate lyase in the presence of extracellular pectic polymers [H]

COG id: COG5434

COG function: function code M; Endopolygalacturonase

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 4 PbH1 repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008957
- InterPro:   IPR003961
- InterPro:   IPR000743
- InterPro:   IPR013783
- InterPro:   IPR006626
- InterPro:   IPR012334
- InterPro:   IPR011050 [H]

Pfam domain/function: PF00041 fn3; PF00295 Glyco_hydro_28 [H]

EC number: =3.2.1.82 [H]

Molecular weight: Translated: 57106; Mature: 56975

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLLKRGVLALWIGASAWAAAPVFNIADYGARKDGSALATEAFRSAIQAAKAAGGGTVYV
CCCHHHCEEEEEECCCHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE
PAGQYISGPIELVSNLVLHIDAGATLRFPATRLPFSRGRWQGIEALTPVPLIGGRNLENV
ECCCCCCCHHHHHCCEEEEEECCCEEECCHHHCCCCCCCCCCCCCCCCCCEECCCCCCEE
SITGRGVLTTSQPEWTRIMGDPGSGPDWLHLLEILELKKPIPDQEYQKAAPQLLPMFISL
EEECCEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
MESKNVLIQGIHIVGSAMWPIQLVYDDNAVVSGVMVETFGGHDTGGIYVDSSRNVRISDC
HCCCCEEEEEEEEECCCCCEEEEEECCCCEEEEEEEEECCCCCCCCEEEECCCCEEEEEE
YIDTGDDGIVIKSGKDADGRRVNRPAENISITNCNVHRAHGAVVLGSEISGWIRNLVASN
EEECCCCEEEEECCCCCCCCCCCCCCCCEEEEECEEEECCCEEEECCHHHHHHHHHHHCC
ITCDGTQMGVRIKTRRGRGGGIEDVRFDNWTMQNVARGINISSFYVMAPENKSTPPEEPV
CEECCCEEEEEEEEECCCCCCCCCEEECCEEHHHHHCCCCEEEEEEECCCCCCCCCCCCH
SERTSIYRNIAISHMTINNSRLVIDIEGIPEMPIDGLRISDIVATAQIGMKAYNTKAMEL
HHHHHHHHHEEEEEEEECCCEEEEEECCCCCCCCCCEEHHHHHHHHHHCHHHCCCEEEEE
HNVQLSAKTGPVFLIRDSTDLELDNVGSRRPLEEAPVVRLDHCPGAILRGSRAFAGTGTF
EEEEEEECCCCEEEEECCCCCEECCCCCCCCCCCCCEEEEECCCCHHEECCEEEECCCCE
LSVAPGELKGIVMEGNRLDSARKPAEESAKSYPMLPESATERTWTEKY
EEECCCCEEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GLLKRGVLALWIGASAWAAAPVFNIADYGARKDGSALATEAFRSAIQAAKAAGGGTVYV
CCHHHCEEEEEECCCHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE
PAGQYISGPIELVSNLVLHIDAGATLRFPATRLPFSRGRWQGIEALTPVPLIGGRNLENV
ECCCCCCCHHHHHCCEEEEEECCCEEECCHHHCCCCCCCCCCCCCCCCCCEECCCCCCEE
SITGRGVLTTSQPEWTRIMGDPGSGPDWLHLLEILELKKPIPDQEYQKAAPQLLPMFISL
EEECCEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
MESKNVLIQGIHIVGSAMWPIQLVYDDNAVVSGVMVETFGGHDTGGIYVDSSRNVRISDC
HCCCCEEEEEEEEECCCCCEEEEEECCCCEEEEEEEEECCCCCCCCEEEECCCCEEEEEE
YIDTGDDGIVIKSGKDADGRRVNRPAENISITNCNVHRAHGAVVLGSEISGWIRNLVASN
EEECCCCEEEEECCCCCCCCCCCCCCCCEEEEECEEEECCCEEEECCHHHHHHHHHHHCC
ITCDGTQMGVRIKTRRGRGGGIEDVRFDNWTMQNVARGINISSFYVMAPENKSTPPEEPV
CEECCCEEEEEEEEECCCCCCCCCEEECCEEHHHHHCCCCEEEEEEECCCCCCCCCCCCH
SERTSIYRNIAISHMTINNSRLVIDIEGIPEMPIDGLRISDIVATAQIGMKAYNTKAMEL
HHHHHHHHHEEEEEEEECCCEEEEEECCCCCCCCCCEEHHHHHHHHHHCHHHCCCEEEEE
HNVQLSAKTGPVFLIRDSTDLELDNVGSRRPLEEAPVVRLDHCPGAILRGSRAFAGTGTF
EEEEEEECCCCEEEEECCCCCEECCCCCCCCCCCCCEEEEECCCCHHEECCEEEECCCCE
LSVAPGELKGIVMEGNRLDSARKPAEESAKSYPMLPESATERTWTEKY
EEECCCCEEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2168372; 1409594 [H]