| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is kinE [H]
Identifier: 116619533
GI number: 116619533
Start: 494026
End: 495624
Strand: Direct
Name: kinE [H]
Synonym: Acid_0392
Alternate gene names: 116619533
Gene position: 494026-495624 (Clockwise)
Preceding gene: 116619531
Following gene: 116619534
Centisome position: 4.96
GC content: 61.66
Gene sequence:
>1599_bases ATGCCGCGACGTCTGGCGCGGAAGCTGATGCTCTCGATCACCGTCATTGTGATCATCGTGGCGGCGGTTTCCGGGCTGGT GAACGTAAAAACCGAGGAGCAGCAGCTCCTGAACACCATGATCCTGGGAGCGGATCAACTCTCCAAGGGCATCACCAGCG CGACGTGGCACGCCATGCTGGACGATCACCGTGAAGCCGCGTACCAGGTAATGCAGACGATCGCGCTCAAGCAGGGGATC GACCGTATCCGCATGTTCAACCGGGCCGGCCAGGTGATGTTCTCCACCAATGCCGAAGACCGGGCCAGCGCGACCGAGGC TCTGCCGGAGACCGACCATCCCGACCTGCCTTCACGTGTTCGGATTTTTCGTGGCGCTAACGGGGGGCGGCGGCTGGCTA TGGCCACGAAGATCTACAACGAGCCTTCCTGCAGCCAGGCGGAGTGCCACGCGCATCCGGCGGAGATGAAAGTGCTCGGC GTGCTCGACCTGCGCCTGAATCTGGAGAACGTGGATCAGGAGGTCGCCGGGATGAAGTATCGCGTGATGCTGGTGACCGC CGTCGAGGTAACGCTGATCAGTATTTTCATCATTTACTTTACACGCCGCTTCCTCGGCCGGCCGATCGAGAAGTTGATCG AAGGGACCAAGGCGATCAGTCAAATGGAACTGGACAAGCCGCTCGACATCATTAATAGCAGCGAGGAGCTCGACGAGCTG GCGCGCTCTTTCGACGTGATGCGCGACCGGTTGCGTTCGGCGCTGGCGGAAATCAATCAGTTCACGCAGAATCTGGAAAC CAAAGTCGAGGAGCGCACGCAGCAACTGAAGGCCGCGCAGAAAAAGCTGCTGCAGAGCGACCGGCTGGCGTCGCTCGGTC AGCTTTCGGCATCGGTGGCGCACGAGATCAACAATCCGGTTTCCGGCGTGCTCAATCTTTCGATGCTGATGCAGCGCATG TTAAAGGACGACGGCATTCCGCCGGAGCGACTCGCGGAATTTCGCAAGTACCTGGGGCAGGTGACCAGCGAAACTGCGCG GGTGGGCCGGATTGTCAGCGACCTGCTGGCGTTCTCGCGGCGCGGCAAGCCGCAGCAGGCGCCGGCCGACATCAACCGCA TCGTGGCGATGACGCTTTCGCTGGTGGAACACAAGATGAAGCTGAGCAACGTGGCGGTGAAGGTTACGCTGTGCGAGCAG CTTCCTCCGGCGCATTGCGACCCTTCGCAGATTCAGCAGGTGGTGCTCAACCTTGTGCTCAACGCGGCTGAGGCTACTCA GGCCAGGCCGGACCGGCACGTCACGGTGTCCACTTCGAGCAGCGAAGGCATGGCGCAGATTTTTGTGTCCGACAATGGCG AGGGCATTCCGCCGGAGAACCTATCGAAGATTTTCGACCCCTTTTTCACGACCAAGCCCGAGGGCAAGGGCGTGGGACTC GGGCTGGCCGTCACGTATGGAATCATCGAGGCGCACAGCGGGGATATCGAGGTGAAGAGCACGGTGGGCAAAGGCACGAC GTTTATCGTGTCGCTGCCGCTGGAGGCGCGCGCGCCGCGCGCCGAGCCGCCGCTTGCGGTACTGGCGCGGCGGGAATGA
Upstream 100 bases:
>100_bases CCAACGAGAATGGCCCAGGCATGCATGGTCCCTATTCTACGCCGCTCAAGAGTGCCGTCCACGCCCCGCGAGACCAGCTA CAATACTTCCAGGTCTGAAT
Downstream 100 bases:
>100_bases AGTATTTGTACGTGGGCGCGACGGAAGAGGTGGACCGCGAGGCCGTGGCGGCCCTTTCGCAGCGGGTCGAAACCGAATTC GGCCTGCCGGTGCGCGGCAT
Product: integral membrane sensor signal transduction histidine kinase
Products: NA
Alternate protein names: Sensor histidine kinase E [H]
Number of amino acids: Translated: 532; Mature: 531
Protein sequence:
>532_residues MPRRLARKLMLSITVIVIIVAAVSGLVNVKTEEQQLLNTMILGADQLSKGITSATWHAMLDDHREAAYQVMQTIALKQGI DRIRMFNRAGQVMFSTNAEDRASATEALPETDHPDLPSRVRIFRGANGGRRLAMATKIYNEPSCSQAECHAHPAEMKVLG VLDLRLNLENVDQEVAGMKYRVMLVTAVEVTLISIFIIYFTRRFLGRPIEKLIEGTKAISQMELDKPLDIINSSEELDEL ARSFDVMRDRLRSALAEINQFTQNLETKVEERTQQLKAAQKKLLQSDRLASLGQLSASVAHEINNPVSGVLNLSMLMQRM LKDDGIPPERLAEFRKYLGQVTSETARVGRIVSDLLAFSRRGKPQQAPADINRIVAMTLSLVEHKMKLSNVAVKVTLCEQ LPPAHCDPSQIQQVVLNLVLNAAEATQARPDRHVTVSTSSSEGMAQIFVSDNGEGIPPENLSKIFDPFFTTKPEGKGVGL GLAVTYGIIEAHSGDIEVKSTVGKGTTFIVSLPLEARAPRAEPPLAVLARRE
Sequences:
>Translated_532_residues MPRRLARKLMLSITVIVIIVAAVSGLVNVKTEEQQLLNTMILGADQLSKGITSATWHAMLDDHREAAYQVMQTIALKQGI DRIRMFNRAGQVMFSTNAEDRASATEALPETDHPDLPSRVRIFRGANGGRRLAMATKIYNEPSCSQAECHAHPAEMKVLG VLDLRLNLENVDQEVAGMKYRVMLVTAVEVTLISIFIIYFTRRFLGRPIEKLIEGTKAISQMELDKPLDIINSSEELDEL ARSFDVMRDRLRSALAEINQFTQNLETKVEERTQQLKAAQKKLLQSDRLASLGQLSASVAHEINNPVSGVLNLSMLMQRM LKDDGIPPERLAEFRKYLGQVTSETARVGRIVSDLLAFSRRGKPQQAPADINRIVAMTLSLVEHKMKLSNVAVKVTLCEQ LPPAHCDPSQIQQVVLNLVLNAAEATQARPDRHVTVSTSSSEGMAQIFVSDNGEGIPPENLSKIFDPFFTTKPEGKGVGL GLAVTYGIIEAHSGDIEVKSTVGKGTTFIVSLPLEARAPRAEPPLAVLARRE >Mature_531_residues PRRLARKLMLSITVIVIIVAAVSGLVNVKTEEQQLLNTMILGADQLSKGITSATWHAMLDDHREAAYQVMQTIALKQGID RIRMFNRAGQVMFSTNAEDRASATEALPETDHPDLPSRVRIFRGANGGRRLAMATKIYNEPSCSQAECHAHPAEMKVLGV LDLRLNLENVDQEVAGMKYRVMLVTAVEVTLISIFIIYFTRRFLGRPIEKLIEGTKAISQMELDKPLDIINSSEELDELA RSFDVMRDRLRSALAEINQFTQNLETKVEERTQQLKAAQKKLLQSDRLASLGQLSASVAHEINNPVSGVLNLSMLMQRML KDDGIPPERLAEFRKYLGQVTSETARVGRIVSDLLAFSRRGKPQQAPADINRIVAMTLSLVEHKMKLSNVAVKVTLCEQL PPAHCDPSQIQQVVLNLVLNAAEATQARPDRHVTVSTSSSEGMAQIFVSDNGEGIPPENLSKIFDPFFTTKPEGKGVGLG LAVTYGIIEAHSGDIEVKSTVGKGTTFIVSLPLEARAPRAEPPLAVLARRE
Specific function: Phosphorylates the sporulation-regulatory protein spo0A under biofilm growth conditions. Also able to weakly phosphorylate spo0F [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 4 PAS (PER-ARNT-SIM) domains [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=245, Percent_Identity=35.9183673469388, Blast_Score=139, Evalue=3e-34, Organism=Escherichia coli, GI1788549, Length=238, Percent_Identity=35.7142857142857, Blast_Score=137, Evalue=2e-33, Organism=Escherichia coli, GI87081816, Length=366, Percent_Identity=25.4098360655738, Blast_Score=96, Evalue=7e-21, Organism=Escherichia coli, GI48994928, Length=231, Percent_Identity=31.1688311688312, Blast_Score=90, Evalue=4e-19, Organism=Escherichia coli, GI145693157, Length=262, Percent_Identity=30.5343511450382, Blast_Score=88, Evalue=2e-18, Organism=Escherichia coli, GI1790300, Length=249, Percent_Identity=30.5220883534137, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI1786783, Length=347, Percent_Identity=22.7665706051873, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1789149, Length=383, Percent_Identity=23.7597911227154, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1786912, Length=259, Percent_Identity=25.8687258687259, Blast_Score=72, Evalue=8e-14, Organism=Escherichia coli, GI1790346, Length=287, Percent_Identity=24.390243902439, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1786600, Length=226, Percent_Identity=28.3185840707965, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI1787894, Length=240, Percent_Identity=26.25, Blast_Score=65, Evalue=9e-12, Organism=Escherichia coli, GI1788393, Length=316, Percent_Identity=21.8354430379747, Blast_Score=62, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 58668; Mature: 58537
Theoretical pI: Translated: 8.02; Mature: 8.02
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRRLARKLMLSITVIVIIVAAVSGLVNVKTEEQQLLNTMILGADQLSKGITSATWHAML CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHCCCHHHHHHHHH DDHREAAYQVMQTIALKQGIDRIRMFNRAGQVMFSTNAEDRASATEALPETDHPDLPSRV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCCCCCCCHHH RIFRGANGGRRLAMATKIYNEPSCSQAECHAHPAEMKVLGVLDLRLNLENVDQEVAGMKY EEEECCCCCCEEEHHHHHCCCCCCCCCHHCCCCCCEEEEEEEEEEECHHHHHHHHHCCEE RVMLVTAVEVTLISIFIIYFTRRFLGRPIEKLIEGTKAISQMELDKPLDIINSSEELDEL EEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHH ARSFDVMRDRLRSALAEINQFTQNLETKVEERTQQLKAAQKKLLQSDRLASLGQLSASVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HEINNPVSGVLNLSMLMQRMLKDDGIPPERLAEFRKYLGQVTSETARVGRIVSDLLAFSR HHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGKPQQAPADINRIVAMTLSLVEHKMKLSNVAVKVTLCEQLPPAHCDPSQIQQVVLNLVL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEHHCCCCCCCCHHHHHHHHHHHHH NAAEATQARPDRHVTVSTSSSEGMAQIFVSDNGEGIPPENLSKIFDPFFTTKPEGKGVGL HHHHHHCCCCCCEEEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCEE GLAVTYGIIEAHSGDIEVKSTVGKGTTFIVSLPLEARAPRAEPPLAVLARRE HHHHHHHHHEECCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHCCCC >Mature Secondary Structure PRRLARKLMLSITVIVIIVAAVSGLVNVKTEEQQLLNTMILGADQLSKGITSATWHAML CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHCCCHHHHHHHHH DDHREAAYQVMQTIALKQGIDRIRMFNRAGQVMFSTNAEDRASATEALPETDHPDLPSRV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCCCCCCCHHH RIFRGANGGRRLAMATKIYNEPSCSQAECHAHPAEMKVLGVLDLRLNLENVDQEVAGMKY EEEECCCCCCEEEHHHHHCCCCCCCCCHHCCCCCCEEEEEEEEEEECHHHHHHHHHCCEE RVMLVTAVEVTLISIFIIYFTRRFLGRPIEKLIEGTKAISQMELDKPLDIINSSEELDEL EEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHH ARSFDVMRDRLRSALAEINQFTQNLETKVEERTQQLKAAQKKLLQSDRLASLGQLSASVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HEINNPVSGVLNLSMLMQRMLKDDGIPPERLAEFRKYLGQVTSETARVGRIVSDLLAFSR HHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGKPQQAPADINRIVAMTLSLVEHKMKLSNVAVKVTLCEQLPPAHCDPSQIQQVVLNLVL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEHHCCCCCCCCHHHHHHHHHHHHH NAAEATQARPDRHVTVSTSSSEGMAQIFVSDNGEGIPPENLSKIFDPFFTTKPEGKGVGL HHHHHHCCCCCCEEEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCEE GLAVTYGIIEAHSGDIEVKSTVGKGTTFIVSLPLEARAPRAEPPLAVLARRE HHHHHHHHHEECCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]