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The map label for this gene is amzA [H]

Identifier: 116619534

GI number: 116619534

Start: 495630

End: 496163

Strand: Direct

Name: amzA [H]

Synonym: Acid_0393

Alternate gene names: 116619534

Gene position: 495630-496163 (Clockwise)

Preceding gene: 116619533

Following gene: 116619535

Centisome position: 4.97

GC content: 65.36

Gene sequence:

>534_bases
TTGTACGTGGGCGCGACGGAAGAGGTGGACCGCGAGGCCGTGGCGGCCCTTTCGCAGCGGGTCGAAACCGAATTCGGCCT
GCCGGTGCGCGGCATGGAGATCGGCAGCGTGGATTTCGCATACGACGCCGGGCGCGGACAGTACAGCTCGATCCCGGTGC
TCGAAATGCTGCTCGGGCGATGTCCGGCGGATGCCGCCAAGCTGCTGGCGGTGACGGATCGCGACCTGTTCATCCCGGTG
CTGACCTTTGTGTTCGGGCAGGCGCAACTGGGCGGGAGTGTGGGAGTGGTCTCGCTGGCGCGCCTGCGGCAGGAGTTTTA
CGGCCTCGCGGCCAACCGCGAGATATTTCTGGAGCGCGCCTACAAAGAAGCGCTCCACGAAACCGGCCACCTGTTCGGGC
TGGTTCACTGTGCGGAAAGAAGGTGCGCGATGTCGCTCGCGACCACGGTCCGGCAGATTGATTTGAAGGACGACGCCTTT
TGCGCCTCGTGTGCGGCGCGCTTGCGGCGTCATCCCGGGGGACCAAACGTATGA

Upstream 100 bases:

>100_bases
TGGGCAAAGGCACGACGTTTATCGTGTCGCTGCCGCTGGAGGCGCGCGCGCCGCGCGCCGAGCCGCCGCTTGCGGTACTG
GCGCGGCGGGAATGAAGTAT

Downstream 100 bases:

>100_bases
AGAGCCATTGGCAGATCCTCGTCGTCGATGACGAAGAGATCATGTGCGAATCGCTGGCCGCCTGGCTGCGTGAAGACGGG
TACGGCGTGGATACCGCCTC

Product: peptidase, zinc-dependent

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MYVGATEEVDREAVAALSQRVETEFGLPVRGMEIGSVDFAYDAGRGQYSSIPVLEMLLGRCPADAAKLLAVTDRDLFIPV
LTFVFGQAQLGGSVGVVSLARLRQEFYGLAANREIFLERAYKEALHETGHLFGLVHCAERRCAMSLATTVRQIDLKDDAF
CASCAARLRRHPGGPNV

Sequences:

>Translated_177_residues
MYVGATEEVDREAVAALSQRVETEFGLPVRGMEIGSVDFAYDAGRGQYSSIPVLEMLLGRCPADAAKLLAVTDRDLFIPV
LTFVFGQAQLGGSVGVVSLARLRQEFYGLAANREIFLERAYKEALHETGHLFGLVHCAERRCAMSLATTVRQIDLKDDAF
CASCAARLRRHPGGPNV
>Mature_177_residues
MYVGATEEVDREAVAALSQRVETEFGLPVRGMEIGSVDFAYDAGRGQYSSIPVLEMLLGRCPADAAKLLAVTDRDLFIPV
LTFVFGQAQLGGSVGVVSLARLRQEFYGLAANREIFLERAYKEALHETGHLFGLVHCAERRCAMSLATTVRQIDLKDDAF
CASCAARLRRHPGGPNV

Specific function: Probable zinc metalloprotease [H]

COG id: COG1913

COG function: function code R; Predicted Zn-dependent proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M54 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012962
- InterPro:   IPR012091 [H]

Pfam domain/function: PF07998 Peptidase_M54 [H]

EC number: NA

Molecular weight: Translated: 19292; Mature: 19292

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYVGATEEVDREAVAALSQRVETEFGLPVRGMEIGSVDFAYDAGRGQYSSIPVLEMLLGR
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECCEEEEEECCCCCCCCCCHHHHHHCC
CPADAAKLLAVTDRDLFIPVLTFVFGQAQLGGSVGVVSLARLRQEFYGLAANREIFLERA
CCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH
YKEALHETGHLFGLVHCAERRCAMSLATTVRQIDLKDDAFCASCAARLRRHPGGPNV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MYVGATEEVDREAVAALSQRVETEFGLPVRGMEIGSVDFAYDAGRGQYSSIPVLEMLLGR
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECCEEEEEECCCCCCCCCCHHHHHHCC
CPADAAKLLAVTDRDLFIPVLTFVFGQAQLGGSVGVVSLARLRQEFYGLAANREIFLERA
CCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH
YKEALHETGHLFGLVHCAERRCAMSLATTVRQIDLKDDAFCASCAARLRRHPGGPNV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]