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The map label for this gene is 116619373

Identifier: 116619373

GI number: 116619373

Start: 312973

End: 313491

Strand: Direct

Name: 116619373

Synonym: Acid_0231

Alternate gene names: NA

Gene position: 312973-313491 (Clockwise)

Preceding gene: 116619371

Following gene: 116619374

Centisome position: 3.14

GC content: 57.23

Gene sequence:

>519_bases
ATGGCGAAACAGAGCACACAGCATAAACTGGACCGCGTCCGCTCTCCACGCGTGCAAATCACCTACGACGTCGAAATGGG
CGGGGCCATCGAGCTCAAGGAATTGCCTTTTGTTATGGGCGTAATGGGAGACTTCACGGGCCAGCCGACCGAGCCGTTGG
CGCGCGTGAAGGACCGAAAGTTCGTTGACGTCAACCCGGATAACTTCGATGCTGTCCTGGAGAGCATGAAACCGCACCTC
GCCTTCTCGGTGGAGAACAAACTGAGCGAGGATCCCGAAGCACCCAAGCTTAAAGTCGATCTCAACTTCAAGAGCATGGA
CGATTTTTCGCCGGACAGTGTCGCCCGGCAAGTCAAGCCTCTGAGAGAGTTGCTGGAATTGCGAGACCGGCTATCCGATC
TGCGCGGCAGCATGCAGGGCAACGACAAACTGGAGGAGTTGCTCCGCGAGGCGGTCACCGATAAGGACAAACTGGCGCGC
CTCAAGAGTGAGCTGGGCAAGGAGGGGTCCAATGAGTAA

Upstream 100 bases:

>100_bases
ATTCAGGCTAGATCGGACTTTCATTATTTGGTACGCTAGGTCTGCCTTGTGGGCCAGTAGCCAAAACGAGGGCCGCCAGG
GTATCTGAGGGAACGAAAAA

Downstream 100 bases:

>100_bases
AGTCGAAAAAGATGCAACGGCGGCAAAACCGGCGGAGCAAACGTTAGAGGTTAGCCTGCTCGACCAAATTGTCGATGAAG
GCAGGCTGGCACGCGACCCT

Product: hypothetical protein

Products: NA

Alternate protein names: Cytoplasmic Protein; T6ss S; Type VI Secretion Protein Family; Conserved Protein; Cytoplasmic Protein SciH; Type VI Secretion Protein VasQ; Type VI Secretion System Protein; Protein ImpB; Type VI Secretion; Type VI Secretion System Core Protein

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MAKQSTQHKLDRVRSPRVQITYDVEMGGAIELKELPFVMGVMGDFTGQPTEPLARVKDRKFVDVNPDNFDAVLESMKPHL
AFSVENKLSEDPEAPKLKVDLNFKSMDDFSPDSVARQVKPLRELLELRDRLSDLRGSMQGNDKLEELLREAVTDKDKLAR
LKSELGKEGSNE

Sequences:

>Translated_172_residues
MAKQSTQHKLDRVRSPRVQITYDVEMGGAIELKELPFVMGVMGDFTGQPTEPLARVKDRKFVDVNPDNFDAVLESMKPHL
AFSVENKLSEDPEAPKLKVDLNFKSMDDFSPDSVARQVKPLRELLELRDRLSDLRGSMQGNDKLEELLREAVTDKDKLAR
LKSELGKEGSNE
>Mature_171_residues
AKQSTQHKLDRVRSPRVQITYDVEMGGAIELKELPFVMGVMGDFTGQPTEPLARVKDRKFVDVNPDNFDAVLESMKPHLA
FSVENKLSEDPEAPKLKVDLNFKSMDDFSPDSVARQVKPLRELLELRDRLSDLRGSMQGNDKLEELLREAVTDKDKLARL
KSELGKEGSNE

Specific function: Unknown

COG id: COG3516

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19470; Mature: 19339

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKQSTQHKLDRVRSPRVQITYDVEMGGAIELKELPFVMGVMGDFTGQPTEPLARVKDRK
CCCCHHHHHHHHHCCCCEEEEEEECCCCEEEHHHHHHHHHHHHCCCCCCCHHHHHHCCCC
FVDVNPDNFDAVLESMKPHLAFSVENKLSEDPEAPKLKVDLNFKSMDDFSPDSVARQVKP
EEECCCCHHHHHHHHCCCCEEEEHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHH
LRELLELRDRLSDLRGSMQGNDKLEELLREAVTDKDKLARLKSELGKEGSNE
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AKQSTQHKLDRVRSPRVQITYDVEMGGAIELKELPFVMGVMGDFTGQPTEPLARVKDRK
CCCHHHHHHHHHCCCCEEEEEEECCCCEEEHHHHHHHHHHHHCCCCCCCHHHHHHCCCC
FVDVNPDNFDAVLESMKPHLAFSVENKLSEDPEAPKLKVDLNFKSMDDFSPDSVARQVKP
EEECCCCHHHHHHHHCCCCEEEEHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHH
LRELLELRDRLSDLRGSMQGNDKLEELLREAVTDKDKLARLKSELGKEGSNE
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA