| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116619374
Identifier: 116619374
GI number: 116619374
Start: 313484
End: 314971
Strand: Direct
Name: 116619374
Synonym: Acid_0232
Alternate gene names: NA
Gene position: 313484-314971 (Clockwise)
Preceding gene: 116619373
Following gene: 116619375
Centisome position: 3.15
GC content: 60.42
Gene sequence:
>1488_bases ATGAGTAAAGTCGAAAAAGATGCAACGGCGGCAAAACCGGCGGAGCAAACGTTAGAGGTTAGCCTGCTCGACCAAATTGT CGATGAAGGCAGGCTGGCACGCGACCCTGCGGCGCGGGAGCGCGGCAAGGACCTGGTGAAGGAGTTCGTCGCCCAGGTGC TGGAAGGCGCGATGACGGTGTCCAAGGACGCCGAAATCATGATCACCGCGCGCATCGCGCAGATCGATCACCTGGTCTCC CTGCAATTGAACGAAGTCCTGCATGCCCCGGAATTCCAGAAGCTTGAGGGCTCGTGGCGCGGGCTGAAATACCTGATGGA TCAGAGCGAAACCAGCGACAAGCTGAAAATCAAGGTTCTGAACGTCACCAAGAAAGAACTACTCCGCGACCTGCAGCGCG CTCCCGAGTTCGATCAGAGCGCCATGTTCAAGAAAGTCTACGAAGAGGAATACGGCGTCTTCGGCGGCGCGCCTTTCTCG GCTTTGATCGGCAATTACGAATTCGGGCGCGGACCCGAGGATATCGAATTGCTTGAAAAGGTCGCCCAGGTGGCTTCCGC GGCGCACGCTCCGTTCCTGACGGCGGCGGCTCCGGAGATGATGAACCTGGACAGTTACACCTCCATCGACGCCCCGCGCG ACATGGCGAAGGTCTTCGACTCCAGCGAATACGCCAAGTGGAAGAGCTTCCGGGCCAGTGAAGACTCGCGCTACGTCGGT CTTTGCCTGCCCCACGTGCTGATGCGCCTGCCGTACGGCAAGGACGGCGTGCAGGTCGATGCCTTTAACTACGAAGAGGG TGTCGATGGCAACGACCACAGCAAGTATTTATGGGGTAACGCCGCGTTTGCCCTGGGAGCGAGACTCACCCAGGCATTCG CCCAGTATGGCTGGTGCGCGGCCATCCGCGGCGTGGAAGGCGGCGGCCTGGTAGAGGGACTGCCCACCCACAACTTCACC ACCGATTCGGGCGACGTTGCCTTGAAATGCCCCACCGAAGCGCCCATCACCGACCGGCGGGAAAAGGAACTCGCCGATCT CGGATTCGTTCCGCTGGTCCACTGCAAGGGCACCGACTATGCGGCGTTCTTTAGCGTCCAGTCAGGTCAGAAGGCCAAGG TCTACGACAGCGAGGCGGCCAACGCGAATGCGCGTCTCTCCACTCAGCTGCCGTACATTCTGGCGGTTTCGCGCTTCGCC CATTACCTGAAGGCCATGATGCGCGACAAGGTAGGCAGCTTCATGTCGCGTGCCGATGCCGAGGTTTTCCTCAATCAGTG GATCATCCAATATGTCTGCCCGGATGATCAGGCCTCGCAGCACTATAAAGCCGCCCACCCGCTGCGCGAGGCGCGGGTCG AGGTGTCCGAAGTCCCTGGCAAGCCCGGAGTCTATCGGGCGGTTGCTTTCATGCGGCCGCACTTCCAACTCGACGAGTTG TCGGTTTCTTTGCGTCTGGTGGCGGAATTGCCCAAGGGCCGGGGCTAA
Upstream 100 bases:
>100_bases ATGCAGGGCAACGACAAACTGGAGGAGTTGCTCCGCGAGGCGGTCACCGATAAGGACAAACTGGCGCGCCTCAAGAGTGA GCTGGGCAAGGAGGGGTCCA
Downstream 100 bases:
>100_bases GTCTCGCAGAAGTTTGGCTGTTTGCCGGTAACTCAATACAAACAGGAGGAAGAGAATGGCACAGGTAGACTATTTCTTGA AGATTGATGGCATAGACGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 495; Mature: 494
Protein sequence:
>495_residues MSKVEKDATAAKPAEQTLEVSLLDQIVDEGRLARDPAARERGKDLVKEFVAQVLEGAMTVSKDAEIMITARIAQIDHLVS LQLNEVLHAPEFQKLEGSWRGLKYLMDQSETSDKLKIKVLNVTKKELLRDLQRAPEFDQSAMFKKVYEEEYGVFGGAPFS ALIGNYEFGRGPEDIELLEKVAQVASAAHAPFLTAAAPEMMNLDSYTSIDAPRDMAKVFDSSEYAKWKSFRASEDSRYVG LCLPHVLMRLPYGKDGVQVDAFNYEEGVDGNDHSKYLWGNAAFALGARLTQAFAQYGWCAAIRGVEGGGLVEGLPTHNFT TDSGDVALKCPTEAPITDRREKELADLGFVPLVHCKGTDYAAFFSVQSGQKAKVYDSEAANANARLSTQLPYILAVSRFA HYLKAMMRDKVGSFMSRADAEVFLNQWIIQYVCPDDQASQHYKAAHPLREARVEVSEVPGKPGVYRAVAFMRPHFQLDEL SVSLRLVAELPKGRG
Sequences:
>Translated_495_residues MSKVEKDATAAKPAEQTLEVSLLDQIVDEGRLARDPAARERGKDLVKEFVAQVLEGAMTVSKDAEIMITARIAQIDHLVS LQLNEVLHAPEFQKLEGSWRGLKYLMDQSETSDKLKIKVLNVTKKELLRDLQRAPEFDQSAMFKKVYEEEYGVFGGAPFS ALIGNYEFGRGPEDIELLEKVAQVASAAHAPFLTAAAPEMMNLDSYTSIDAPRDMAKVFDSSEYAKWKSFRASEDSRYVG LCLPHVLMRLPYGKDGVQVDAFNYEEGVDGNDHSKYLWGNAAFALGARLTQAFAQYGWCAAIRGVEGGGLVEGLPTHNFT TDSGDVALKCPTEAPITDRREKELADLGFVPLVHCKGTDYAAFFSVQSGQKAKVYDSEAANANARLSTQLPYILAVSRFA HYLKAMMRDKVGSFMSRADAEVFLNQWIIQYVCPDDQASQHYKAAHPLREARVEVSEVPGKPGVYRAVAFMRPHFQLDEL SVSLRLVAELPKGRG >Mature_494_residues SKVEKDATAAKPAEQTLEVSLLDQIVDEGRLARDPAARERGKDLVKEFVAQVLEGAMTVSKDAEIMITARIAQIDHLVSL QLNEVLHAPEFQKLEGSWRGLKYLMDQSETSDKLKIKVLNVTKKELLRDLQRAPEFDQSAMFKKVYEEEYGVFGGAPFSA LIGNYEFGRGPEDIELLEKVAQVASAAHAPFLTAAAPEMMNLDSYTSIDAPRDMAKVFDSSEYAKWKSFRASEDSRYVGL CLPHVLMRLPYGKDGVQVDAFNYEEGVDGNDHSKYLWGNAAFALGARLTQAFAQYGWCAAIRGVEGGGLVEGLPTHNFTT DSGDVALKCPTEAPITDRREKELADLGFVPLVHCKGTDYAAFFSVQSGQKAKVYDSEAANANARLSTQLPYILAVSRFAH YLKAMMRDKVGSFMSRADAEVFLNQWIIQYVCPDDQASQHYKAAHPLREARVEVSEVPGKPGVYRAVAFMRPHFQLDELS VSLRLVAELPKGRG
Specific function: Unknown
COG id: COG3517
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54863; Mature: 54732
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKVEKDATAAKPAEQTLEVSLLDQIVDEGRLARDPAARERGKDLVKEFVAQVLEGAMTV CCCCCCCHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEE SKDAEIMITARIAQIDHLVSLQLNEVLHAPEFQKLEGSWRGLKYLMDQSETSDKLKIKVL CCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHCCCCCCCEEEEEEE NVTKKELLRDLQRAPEFDQSAMFKKVYEEEYGVFGGAPFSALIGNYEFGRGPEDIELLEK CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCHHHHHHHH VAQVASAAHAPFLTAAAPEMMNLDSYTSIDAPRDMAKVFDSSEYAKWKSFRASEDSRYVG HHHHHHHHCCCCHHHCCHHHHCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCHH LCLPHVLMRLPYGKDGVQVDAFNYEEGVDGNDHSKYLWGNAAFALGARLTQAFAQYGWCA HHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHCHHH AIRGVEGGGLVEGLPTHNFTTDSGDVALKCPTEAPITDRREKELADLGFVPLVHCKGTDY HHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCEEEEEECCCCE AAFFSVQSGQKAKVYDSEAANANARLSTQLPYILAVSRFAHYLKAMMRDKVGSFMSRADA EEEEEECCCCCCEEECCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVFLNQWIIQYVCPDDQASQHYKAAHPLREARVEVSEVPGKPGVYRAVAFMRPHFQLDEL HHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHH SVSLRLVAELPKGRG HHHHHHHHHCCCCCC >Mature Secondary Structure SKVEKDATAAKPAEQTLEVSLLDQIVDEGRLARDPAARERGKDLVKEFVAQVLEGAMTV CCCCCCHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEE SKDAEIMITARIAQIDHLVSLQLNEVLHAPEFQKLEGSWRGLKYLMDQSETSDKLKIKVL CCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHCCCCCCCEEEEEEE NVTKKELLRDLQRAPEFDQSAMFKKVYEEEYGVFGGAPFSALIGNYEFGRGPEDIELLEK CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCHHHHHHHH VAQVASAAHAPFLTAAAPEMMNLDSYTSIDAPRDMAKVFDSSEYAKWKSFRASEDSRYVG HHHHHHHHCCCCHHHCCHHHHCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCHH LCLPHVLMRLPYGKDGVQVDAFNYEEGVDGNDHSKYLWGNAAFALGARLTQAFAQYGWCA HHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHCHHH AIRGVEGGGLVEGLPTHNFTTDSGDVALKCPTEAPITDRREKELADLGFVPLVHCKGTDY HHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCEEEEEECCCCE AAFFSVQSGQKAKVYDSEAANANARLSTQLPYILAVSRFAHYLKAMMRDKVGSFMSRADA EEEEEECCCCCCEEECCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVFLNQWIIQYVCPDDQASQHYKAAHPLREARVEVSEVPGKPGVYRAVAFMRPHFQLDEL HHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHH SVSLRLVAELPKGRG HHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA