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The map label for this gene is glyQ [H]

Identifier: 116516637

GI number: 116516637

Start: 1324161

End: 1325078

Strand: Reverse

Name: glyQ [H]

Synonym: SPD_1305

Alternate gene names: 116516637

Gene position: 1325078-1324161 (Counterclockwise)

Preceding gene: 116516094

Following gene: 116516232

Centisome position: 64.76

GC content: 43.68

Gene sequence:

>918_bases
ATGTCTAAGAAATTGACTTTCCAGGAAATCATCCTTACTTTGCAACAATTTTGGAATGACCAAGGTTGTATGCTTATGCA
GGCTTATGATAATGAAAAAGGTGCGGGAACAATGAGTCCTTACACTTTCCTTCGTGCTATCGGACCTGAGCCATGGAATG
CAGCTTATGTAGAGCCATCACGTCGTCCTGCTGACGGTCGTTATGGGGAAAACCCTAACCGTCTCTACCAACACCACCAA
TTCCAGGTGGTCATGAAGCCTTCTCCATCAAATATCCAAGAACTTTACCTTGAGTCTTTGGAAAAATTGGGAATCAATCC
TTTGGAGCACGATATTCGTTTTGTTGAGGACAACTGGGAAAACCCATCAACTGGTTCAGCTGGTCTTGGTTGGGAAGTTT
GGCTTGACGGAATGGAAATCACTCAGTTCACTTATTTCCAACAAGTCGGTGGATTGGCAACTGGCCCTGTGACTGCGGAA
GTTACCTATGGTTTGGAGCGCTTGGCTTCTTACATTCAAGAAGTAGACTCTATCTATGATATCGAGTGGGCTGATGGTGT
AAAATACGGAGAAATCTTTATCCAGCCTGAGTATGAGCACTCAAAATATTCATTTGAAATTTCGGACCAAGAAATGTTGC
TTGAAAACTTTGATAAGTTTGAAAAAGAAGCTGGTCGTGCATTAGAAGAAGGCTTGGTACACCCTGCCTATGACTATGTT
CTCAAATGTTCACATACCTTTAATCTGCTTGACGCGCGTGGTGCCGTATCTGTAACAGAGCGTGCAGGCTATATCGCTCG
TATCCGTAACTTGGCCCGTGTTGTAGCCAAAACCTTTGTTGCAGAACGCAAACGCCTAGGTTACCCACTTTTGGATGAAG
AAACACGAGTTAAACTTTTAGCAGAAGACGCAGAATAG

Upstream 100 bases:

>100_bases
TAGGGTGCTGAGCTAGACGCAGTACTAACTCGTCTTGCCTCGTATAATCGACGAGGCAGACTCGTGTCGCAAGAAATCAT
TTTTTATTAAGGAGTAAACA

Downstream 100 bases:

>100_bases
TGAGTAATACTGTACTCTAAAATCGTTAGAGGCAAGTCGAAGACTTGCTAGAGGGATATGCACCGCCATACTGTTATGTG
GGGATTTTTGAAACCTTAGG

Product: glycyl-tRNA synthetase subunit alpha

Products: NA

Alternate protein names: Glycine--tRNA ligase alpha subunit; GlyRS [H]

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MSKKLTFQEIILTLQQFWNDQGCMLMQAYDNEKGAGTMSPYTFLRAIGPEPWNAAYVEPSRRPADGRYGENPNRLYQHHQ
FQVVMKPSPSNIQELYLESLEKLGINPLEHDIRFVEDNWENPSTGSAGLGWEVWLDGMEITQFTYFQQVGGLATGPVTAE
VTYGLERLASYIQEVDSIYDIEWADGVKYGEIFIQPEYEHSKYSFEISDQEMLLENFDKFEKEAGRALEEGLVHPAYDYV
LKCSHTFNLLDARGAVSVTERAGYIARIRNLARVVAKTFVAERKRLGYPLLDEETRVKLLAEDAE

Sequences:

>Translated_305_residues
MSKKLTFQEIILTLQQFWNDQGCMLMQAYDNEKGAGTMSPYTFLRAIGPEPWNAAYVEPSRRPADGRYGENPNRLYQHHQ
FQVVMKPSPSNIQELYLESLEKLGINPLEHDIRFVEDNWENPSTGSAGLGWEVWLDGMEITQFTYFQQVGGLATGPVTAE
VTYGLERLASYIQEVDSIYDIEWADGVKYGEIFIQPEYEHSKYSFEISDQEMLLENFDKFEKEAGRALEEGLVHPAYDYV
LKCSHTFNLLDARGAVSVTERAGYIARIRNLARVVAKTFVAERKRLGYPLLDEETRVKLLAEDAE
>Mature_304_residues
SKKLTFQEIILTLQQFWNDQGCMLMQAYDNEKGAGTMSPYTFLRAIGPEPWNAAYVEPSRRPADGRYGENPNRLYQHHQF
QVVMKPSPSNIQELYLESLEKLGINPLEHDIRFVEDNWENPSTGSAGLGWEVWLDGMEITQFTYFQQVGGLATGPVTAEV
TYGLERLASYIQEVDSIYDIEWADGVKYGEIFIQPEYEHSKYSFEISDQEMLLENFDKFEKEAGRALEEGLVHPAYDYVL
KCSHTFNLLDARGAVSVTERAGYIARIRNLARVVAKTFVAERKRLGYPLLDEETRVKLLAEDAE

Specific function: Unknown

COG id: COG0752

COG function: function code J; Glycyl-tRNA synthetase, alpha subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Escherichia coli, GI1789983, Length=295, Percent_Identity=61.3559322033898, Blast_Score=376, Evalue=1e-105,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006194
- InterPro:   IPR002310 [H]

Pfam domain/function: PF02091 tRNA-synt_2e [H]

EC number: =6.1.1.14 [H]

Molecular weight: Translated: 34949; Mature: 34817

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKLTFQEIILTLQQFWNDQGCMLMQAYDNEKGAGTMSPYTFLRAIGPEPWNAAYVEPS
CCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCEEECCC
RRPADGRYGENPNRLYQHHQFQVVMKPSPSNIQELYLESLEKLGINPLEHDIRFVEDNWE
CCCCCCCCCCCHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHEEEECCCC
NPSTGSAGLGWEVWLDGMEITQFTYFQQVGGLATGPVTAEVTYGLERLASYIQEVDSIYD
CCCCCCCCCCHHEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
IEWADGVKYGEIFIQPEYEHSKYSFEISDQEMLLENFDKFEKEAGRALEEGLVHPAYDYV
CCCCCCCEECEEEEEECCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
LKCSHTFNLLDARGAVSVTERAGYIARIRNLARVVAKTFVAERKRLGYPLLDEETRVKLL
EECCCHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE
AEDAE
ECCCC
>Mature Secondary Structure 
SKKLTFQEIILTLQQFWNDQGCMLMQAYDNEKGAGTMSPYTFLRAIGPEPWNAAYVEPS
CCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCEEECCC
RRPADGRYGENPNRLYQHHQFQVVMKPSPSNIQELYLESLEKLGINPLEHDIRFVEDNWE
CCCCCCCCCCCHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHEEEECCCC
NPSTGSAGLGWEVWLDGMEITQFTYFQQVGGLATGPVTAEVTYGLERLASYIQEVDSIYD
CCCCCCCCCCHHEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
IEWADGVKYGEIFIQPEYEHSKYSFEISDQEMLLENFDKFEKEAGRALEEGLVHPAYDYV
CCCCCCCEECEEEEEECCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
LKCSHTFNLLDARGAVSVTERAGYIARIRNLARVVAKTFVAERKRLGYPLLDEETRVKLL
EECCCHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE
AEDAE
ECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12122206; 12799345 [H]