| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is 116516094
Identifier: 116516094
GI number: 116516094
Start: 1325272
End: 1325661
Strand: Reverse
Name: 116516094
Synonym: SPD_1306
Alternate gene names: NA
Gene position: 1325661-1325272 (Counterclockwise)
Preceding gene: 116515990
Following gene: 116516637
Centisome position: 64.79
GC content: 32.56
Gene sequence:
>390_bases TTGGTCGGACATTTTTTAGATGATTTTGATGGTTATGACTCTTATATCTGGTTCGAAGAGGGGATGGTTGAATATATTAG TCGCAAGTATTTCTTGACAGAAGAGGAATTTCAAGCGGAAAAAATTTGTAATCAATCTCTCGTAGAACTTTTTCAGAAGA AGTATAGTTGGCATTCATTGAATGATTTTGGTTCTTCGACTTATGATAAGAACTATGCAAGTATTTTTTATGAATACTGG CGCAGCTTTTTGACAGTAGATAAGTTGGTAGAAAATTTAGGTAGTGTACAAGCGGTCTTAGATTCTTATCATCTATGGGC AAATACAGAAAAAACTCTTCCCTTGTTAAATTGGTTTGTTCAGCAGAAATTAATTGAAAAAGAAATATAA
Upstream 100 bases:
>100_bases TGGACTACGAGTGTTCTGAGCAAACTCAAGCAATAGAAAGTCACTATCATTCTTTATCTGAAAATTTCCTCTTACAGATT GTAGGACATGAGTTAGCTCA
Downstream 100 bases:
>100_bases AAACTAAAGGAGTAAACAATGTCTAAGAAATTAACATTTCACTGCATCAGTGGCAGAGACCTCCTTACAGTCGGACTGCC CCACGCTCAGCACTAGGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MVGHFLDDFDGYDSYIWFEEGMVEYISRKYFLTEEEFQAEKICNQSLVELFQKKYSWHSLNDFGSSTYDKNYASIFYEYW RSFLTVDKLVENLGSVQAVLDSYHLWANTEKTLPLLNWFVQQKLIEKEI
Sequences:
>Translated_129_residues MVGHFLDDFDGYDSYIWFEEGMVEYISRKYFLTEEEFQAEKICNQSLVELFQKKYSWHSLNDFGSSTYDKNYASIFYEYW RSFLTVDKLVENLGSVQAVLDSYHLWANTEKTLPLLNWFVQQKLIEKEI >Mature_129_residues MVGHFLDDFDGYDSYIWFEEGMVEYISRKYFLTEEEFQAEKICNQSLVELFQKKYSWHSLNDFGSSTYDKNYASIFYEYW RSFLTVDKLVENLGSVQAVLDSYHLWANTEKTLPLLNWFVQQKLIEKEI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15535; Mature: 15535
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGHFLDDFDGYDSYIWFEEGMVEYISRKYFLTEEEFQAEKICNQSLVELFQKKYSWHSL CCCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCH NDFGSSTYDKNYASIFYEYWRSFLTVDKLVENLGSVQAVLDSYHLWANTEKTLPLLNWFV HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH QQKLIEKEI HHHHHHHCC >Mature Secondary Structure MVGHFLDDFDGYDSYIWFEEGMVEYISRKYFLTEEEFQAEKICNQSLVELFQKKYSWHSL CCCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCH NDFGSSTYDKNYASIFYEYWRSFLTVDKLVENLGSVQAVLDSYHLWANTEKTLPLLNWFV HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH QQKLIEKEI HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA