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The map label for this gene is ybhK [C]

Identifier: 116516455

GI number: 116516455

Start: 1416055

End: 1417032

Strand: Reverse

Name: ybhK [C]

Synonym: SPD_1395

Alternate gene names: 116516455

Gene position: 1417032-1416055 (Counterclockwise)

Preceding gene: 116515346

Following gene: 116515514

Centisome position: 69.25

GC content: 45.4

Gene sequence:

>978_bases
ATGAGAAAACCAAAGATAACGGTGATTGGTGGAGGGACTGGAATTCCCGTCATTCTAAAAAGTCTGCGGGAAAAAGATGT
GGAAATCGCAGCTATCGTGACGGTGGCAGATGATGGTGGTTCTTCAGGTGAACTCCGAAAAAATATGCAACAGTTGACAC
CGCCAGGTGATCTTCGTAATGTCCTTGTGGCCATGTCGGATATGCCTAAGTTTTATGAGAAGGTCTTTCAGTATCGGTTC
TCTGAGGATGCCGGAGCCTTTGCTGGCCATCCATTGGGAAATCTCATCATTGCTGGCTTGTCAGAAATGCAGGGTTCAAC
CTATAATGCCATGCAGTTATTGAGCAAATTTTTCCATACAACAGGGAAAATTTATCCTTCCAGTGACCATCCTTTGACCC
TTCATGCAGTCTTTCAGGATGGGACAGAAGTGGCTGGAGAGAGTCATATTGTAGACCATCGAGGCATAATTGACAATGTC
TATGTGACCAATGCCCTAAACGATGATACGCCTCTGGCCAGCCGTCGAGTAGTGCAGACCATCCTTGAAAGTGACATGAT
TGTCCTAGGGCCAGGTTCCCTCTTTACCTCTATTTTGCCCAATATCGTGATTAAGGAAATTGGGCGGGCTCTTTTGGAAA
CCAAGGCAGAAATTGCCTATGTCTGCAATATCATGACCCAACGTGGGGAGACGGAACACTTTACAGATAGCAACCACGTG
GAAGTCTTGCATCGTCACCTTGGTCGCCCTTTTATCGACACTGTCTTGGTGAATATTGAAAAAGTGCCTCAGGAATACAT
GAATTCCAACCGTTTTGATGAATACTTGGTGCAAGTGGAACACGATTTTGTAGGTCTTTGTAAGCAAGTTTCGCGCGTGA
TTTCATCTAACTTCCTTCGTCTGGAAAATGGCGGTGCCTTCCACGATGGAGATTTGATTGTGGACGAGTTGATGCGCATT
ATACAGGTGAAAAAATGA

Upstream 100 bases:

>100_bases
TGGCATTTGCTAAACGCTTGGTGCAGGACTTATCCAAGAATTGGTCTGTTAATGAAGGGCATCGCGACAAAGACCGCAGA
AAGGAAACGGTAAACCGTTC

Downstream 100 bases:

>100_bases
GTTTCACAGTAGCAGTAAAAGAAGAAATCCTGGGCCAACACCATCTGAGCTGGCATGAATTATCTGCCATTATCAAAATG
TCTGGTAGCATCGGTCTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MRKPKITVIGGGTGIPVILKSLREKDVEIAAIVTVADDGGSSGELRKNMQQLTPPGDLRNVLVAMSDMPKFYEKVFQYRF
SEDAGAFAGHPLGNLIIAGLSEMQGSTYNAMQLLSKFFHTTGKIYPSSDHPLTLHAVFQDGTEVAGESHIVDHRGIIDNV
YVTNALNDDTPLASRRVVQTILESDMIVLGPGSLFTSILPNIVIKEIGRALLETKAEIAYVCNIMTQRGETEHFTDSNHV
EVLHRHLGRPFIDTVLVNIEKVPQEYMNSNRFDEYLVQVEHDFVGLCKQVSRVISSNFLRLENGGAFHDGDLIVDELMRI
IQVKK

Sequences:

>Translated_325_residues
MRKPKITVIGGGTGIPVILKSLREKDVEIAAIVTVADDGGSSGELRKNMQQLTPPGDLRNVLVAMSDMPKFYEKVFQYRF
SEDAGAFAGHPLGNLIIAGLSEMQGSTYNAMQLLSKFFHTTGKIYPSSDHPLTLHAVFQDGTEVAGESHIVDHRGIIDNV
YVTNALNDDTPLASRRVVQTILESDMIVLGPGSLFTSILPNIVIKEIGRALLETKAEIAYVCNIMTQRGETEHFTDSNHV
EVLHRHLGRPFIDTVLVNIEKVPQEYMNSNRFDEYLVQVEHDFVGLCKQVSRVISSNFLRLENGGAFHDGDLIVDELMRI
IQVKK
>Mature_325_residues
MRKPKITVIGGGTGIPVILKSLREKDVEIAAIVTVADDGGSSGELRKNMQQLTPPGDLRNVLVAMSDMPKFYEKVFQYRF
SEDAGAFAGHPLGNLIIAGLSEMQGSTYNAMQLLSKFFHTTGKIYPSSDHPLTLHAVFQDGTEVAGESHIVDHRGIIDNV
YVTNALNDDTPLASRRVVQTILESDMIVLGPGSLFTSILPNIVIKEIGRALLETKAEIAYVCNIMTQRGETEHFTDSNHV
EVLHRHLGRPFIDTVLVNIEKVPQEYMNSNRFDEYLVQVEHDFVGLCKQVSRVISSNFLRLENGGAFHDGDLIVDELMRI
IQVKK

Specific function: Unknown

COG id: COG0391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0052 family [H]

Homologues:

Organism=Escherichia coli, GI1786997, Length=254, Percent_Identity=31.1023622047244, Blast_Score=125, Evalue=5e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002882
- InterPro:   IPR010119 [H]

Pfam domain/function: PF01933 UPF0052 [H]

EC number: NA

Molecular weight: Translated: 36059; Mature: 36059

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: PS01036 HSP70_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKPKITVIGGGTGIPVILKSLREKDVEIAAIVTVADDGGSSGELRKNMQQLTPPGDLRN
CCCCEEEEEECCCCHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHCCCCHHHHH
VLVAMSDMPKFYEKVFQYRFSEDAGAFAGHPLGNLIIAGLSEMQGSTYNAMQLLSKFFHT
HHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
TGKIYPSSDHPLTLHAVFQDGTEVAGESHIVDHRGIIDNVYVTNALNDDTPLASRRVVQT
CCCCCCCCCCCEEEEEEECCCHHHCCCCCEECCCCCCCCEEEECCCCCCCCHHHHHHHHH
ILESDMIVLGPGSLFTSILPNIVIKEIGRALLETKAEIAYVCNIMTQRGETEHFTDSNHV
HHHCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
EVLHRHLGRPFIDTVLVNIEKVPQEYMNSNRFDEYLVQVEHDFVGLCKQVSRVISSNFLR
HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
LENGGAFHDGDLIVDELMRIIQVKK
ECCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRKPKITVIGGGTGIPVILKSLREKDVEIAAIVTVADDGGSSGELRKNMQQLTPPGDLRN
CCCCEEEEEECCCCHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHCCCCHHHHH
VLVAMSDMPKFYEKVFQYRFSEDAGAFAGHPLGNLIIAGLSEMQGSTYNAMQLLSKFFHT
HHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
TGKIYPSSDHPLTLHAVFQDGTEVAGESHIVDHRGIIDNVYVTNALNDDTPLASRRVVQT
CCCCCCCCCCCEEEEEEECCCHHHCCCCCEECCCCCCCCEEEECCCCCCCCHHHHHHHHH
ILESDMIVLGPGSLFTSILPNIVIKEIGRALLETKAEIAYVCNIMTQRGETEHFTDSNHV
HHHCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
EVLHRHLGRPFIDTVLVNIEKVPQEYMNSNRFDEYLVQVEHDFVGLCKQVSRVISSNFLR
HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
LENGGAFHDGDLIVDELMRIIQVKK
ECCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11463916 [H]