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The map label for this gene is yhbJ [C]

Identifier: 116515346

GI number: 116515346

Start: 1417029

End: 1417919

Strand: Reverse

Name: yhbJ [C]

Synonym: SPD_1396

Alternate gene names: 116515346

Gene position: 1417919-1417029 (Counterclockwise)

Preceding gene: 116516493

Following gene: 116516455

Centisome position: 69.3

GC content: 44.11

Gene sequence:

>891_bases
ATGACAAAGAAACAACTTCACTTGGTGATTGTGACAGGGATGGGTGGCGCAGGGAAAACTGTAGCCATTCAGTCCTTCGA
GGATCTAGGTTATTTCACCATTGATAATATGCCGCCAGCTCTCTTGCCTAAGTTTTTGCAGCTGGTTGAAATTAAGGAAG
ACAATCCTAAGTTGGCCTTGGTAGTGGATATGCGTAGTCGTTCTTTCTTTTCAGAGATTCAAGCTGTTTTGGATGAGTTG
GAAAATCAAGATGGTTTGGATTTCAAAATCCTCTTTTTGGATGCGGCTGATAAGGAATTGGTCGCTCGTTACAAGGAAAC
CAGACGGAGTCACCCACTAGCAGCAGACGGTCGTATTTTAGATGGAATCAAGTTGGAACGTGAACTCTTGGCACCTTTGA
AAAATATGAGCCAAAATGTGGTGGATACGACTGAACTCACTCCACGTGAGCTGCGCAAAACCCTTGCAGAGCAGTTTTCA
GACCAAGAACAAGCTCAGTCTTTCCGTATCGAAGTCATGTCTTTCGGATTTAAGTATGGAATCCCGATTGATGCGGACTT
GGTCTTTGATGTCCGTTTCTTGCCAAATCCCTATTATTTACCAGAACTGAGAAACCAAACGGGTGTGGATGAACCTGTTT
ATGATTATGTCATGAACCATCCTGAGTCAGAAGACTTTTATCAACATTTATTGGCCTTGATTGAGCCGATTCTGCCAAGT
TACCAAAAGGAAGGTAAGTCCGTTTTGACCATTGCCATGGGATGTACGGGTGGACAACACCGTAGTGTGGCATTTGCTAA
ACGCTTGGTGCAGGACTTATCCAAGAATTGGTCTGTTAATGAAGGGCATCGCGACAAAGACCGCAGAAAGGAAACGGTAA
ACCGTTCATGA

Upstream 100 bases:

>100_bases
TCCTCGTGATGTAAAAGTCGAAATTGAAGTCATCGCAGAGATTGGATAAGCTAGTTGAAGTTTGGTGTTGCCAAACTTCT
TTTGATATAAGGAGAAAAAG

Downstream 100 bases:

>100_bases
GAAAACCAAAGATAACGGTGATTGGTGGAGGGACTGGAATTCCCGTCATTCTAAAAAGTCTGCGGGAAAAAGATGTGGAA
ATCGCAGCTATCGTGACGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MTKKQLHLVIVTGMGGAGKTVAIQSFEDLGYFTIDNMPPALLPKFLQLVEIKEDNPKLALVVDMRSRSFFSEIQAVLDEL
ENQDGLDFKILFLDAADKELVARYKETRRSHPLAADGRILDGIKLERELLAPLKNMSQNVVDTTELTPRELRKTLAEQFS
DQEQAQSFRIEVMSFGFKYGIPIDADLVFDVRFLPNPYYLPELRNQTGVDEPVYDYVMNHPESEDFYQHLLALIEPILPS
YQKEGKSVLTIAMGCTGGQHRSVAFAKRLVQDLSKNWSVNEGHRDKDRRKETVNRS

Sequences:

>Translated_296_residues
MTKKQLHLVIVTGMGGAGKTVAIQSFEDLGYFTIDNMPPALLPKFLQLVEIKEDNPKLALVVDMRSRSFFSEIQAVLDEL
ENQDGLDFKILFLDAADKELVARYKETRRSHPLAADGRILDGIKLERELLAPLKNMSQNVVDTTELTPRELRKTLAEQFS
DQEQAQSFRIEVMSFGFKYGIPIDADLVFDVRFLPNPYYLPELRNQTGVDEPVYDYVMNHPESEDFYQHLLALIEPILPS
YQKEGKSVLTIAMGCTGGQHRSVAFAKRLVQDLSKNWSVNEGHRDKDRRKETVNRS
>Mature_295_residues
TKKQLHLVIVTGMGGAGKTVAIQSFEDLGYFTIDNMPPALLPKFLQLVEIKEDNPKLALVVDMRSRSFFSEIQAVLDELE
NQDGLDFKILFLDAADKELVARYKETRRSHPLAADGRILDGIKLERELLAPLKNMSQNVVDTTELTPRELRKTLAEQFSD
QEQAQSFRIEVMSFGFKYGIPIDADLVFDVRFLPNPYYLPELRNQTGVDEPVYDYVMNHPESEDFYQHLLALIEPILPSY
QKEGKSVLTIAMGCTGGQHRSVAFAKRLVQDLSKNWSVNEGHRDKDRRKETVNRS

Specific function: Displays ATPase and GTPase activities

COG id: COG1660

COG function: function code R; Predicted P-loop-containing kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0042 family

Homologues:

Organism=Escherichia coli, GI1789598, Length=286, Percent_Identity=38.8111888111888, Blast_Score=197, Evalue=9e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1396_STRP2 (Q04JI2)

Other databases:

- EMBL:   CP000410
- RefSeq:   YP_816856.1
- ProteinModelPortal:   Q04JI2
- STRING:   Q04JI2
- EnsemblBacteria:   EBSTRT00000019983
- GeneID:   4441088
- GenomeReviews:   CP000410_GR
- KEGG:   spd:SPD_1396
- eggNOG:   COG1660
- GeneTree:   EBGT00050000026974
- HOGENOM:   HBG289732
- OMA:   GIGCTGG
- ProtClustDB:   PRK05416
- HAMAP:   MF_00636
- InterPro:   IPR005337
- PIRSF:   PIRSF005052

Pfam domain/function: PF03668 ATP_bind_2

EC number: NA

Molecular weight: Translated: 33765; Mature: 33634

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKKQLHLVIVTGMGGAGKTVAIQSFEDLGYFTIDNMPPALLPKFLQLVEIKEDNPKLAL
CCCCEEEEEEEECCCCCCCEEEEECHHHCCCEEECCCCHHHHHHHHHHHHHCCCCCCEEE
VVDMRSRSFFSEIQAVLDELENQDGLDFKILFLDAADKELVARYKETRRSHPLAADGRIL
EEECHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCEE
DGIKLERELLAPLKNMSQNVVDTTELTPRELRKTLAEQFSDQEQAQSFRIEVMSFGFKYG
CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEC
IPIDADLVFDVRFLPNPYYLPELRNQTGVDEPVYDYVMNHPESEDFYQHLLALIEPILPS
CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
YQKEGKSVLTIAMGCTGGQHRSVAFAKRLVQDLSKNWSVNEGHRDKDRRKETVNRS
HHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCC
>Mature Secondary Structure 
TKKQLHLVIVTGMGGAGKTVAIQSFEDLGYFTIDNMPPALLPKFLQLVEIKEDNPKLAL
CCCEEEEEEEECCCCCCCEEEEECHHHCCCEEECCCCHHHHHHHHHHHHHCCCCCCEEE
VVDMRSRSFFSEIQAVLDELENQDGLDFKILFLDAADKELVARYKETRRSHPLAADGRIL
EEECHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCEE
DGIKLERELLAPLKNMSQNVVDTTELTPRELRKTLAEQFSDQEQAQSFRIEVMSFGFKYG
CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEC
IPIDADLVFDVRFLPNPYYLPELRNQTGVDEPVYDYVMNHPESEDFYQHLLALIEPILPS
CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
YQKEGKSVLTIAMGCTGGQHRSVAFAKRLVQDLSKNWSVNEGHRDKDRRKETVNRS
HHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA