| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is yceI [H]
Identifier: 116495729
GI number: 116495729
Start: 2275328
End: 2276533
Strand: Direct
Name: yceI [H]
Synonym: LSEI_2277
Alternate gene names: 116495729
Gene position: 2275328-2276533 (Clockwise)
Preceding gene: 116495726
Following gene: 116495734
Centisome position: 78.59
GC content: 50.41
Gene sequence:
>1206_bases ATGTCAAAAAAACCGTCCGGCCATACGCGGCTGATCGTTGGCATCGGCGTTGCATGGCTGTTTGATGCCATGGATGTTGG CATGTTAAGTTTCGTCATTGCGGCCTTACATAGCGAATGGCAATTAAGTACGGTGCAAATGGGCTGGATTGGCAGTGTCA GTTCAATTGGGATGGCCGTTGGTGCCATTTTGTTCGGGATGATGGCGGACCGTTTTGGCCGTAAAGCGATCTTGATTCTT ACTTTGCTAGTTTTTTCAATTGGCAGCGGCATTTCTGCCTTCGCCACAAGTTACGGCATTTTTCTTGGTTTGCGATTCAT CATCGGTGCAGGCCTCGGTGGCGAGCTGCCAGTGGCATCAACCTTGGTTTCAGAAAGTGTGCCAGTTGAAAAACGTGGTC GTAGTGTTGTCCTGTTGGAAAGTTTCTGGGCTGCCGGTTGGCTGTTAGCAGCCATTATTTCTTACTTCATTATGCCAATC TGGGGCTGGCGCGTTGCCGTCTTTGCCACTGGTTTAGCCGGACTCTATGCGTTTTATTTTCGTGAAGGCATCAACGAATC GCATGTCTTTAAAAAAGTGGCGCGGCCCGGCTTGCTCAAAACCCTCAGCACCCTTTGGCGCCCGCCTTATGTTCGCGCAA CCTTGATGCTGTGGATCGTCTGGTTCATGGTAGTCTTCTCTTACTATGGCATGTTTCTTTGGCTGCCAAGTGTCATGGTA CTCAAAGGATTTAGTCTGATTAATAGTTTTGGTTACGTCTTAATCATGACGCTTGCGCAGTTGCCTGGCTATTTCGTCGC TGCTTGGTTAATTGAAAAATGGGGACGTAAAATGGTGCTGAGTCTGTTTCTGCTAGGCACAGCCGCCAGCGCATTAGGCT TTGGCCTAGCCACCGGTTTGCCAATGCTACTGACTGCCGGCATGTTGCTCTCCTTCTTCAATCTCGGAGCTTGGGGCGCG TTATACGCGTATTCTCCTGAACAATACCCAACTGTTGTCCGCAGCAGTGGTTCCGGTATGGCCGCCGGTATCGGCCGCAT CGGTGGTGTGGTTGGACCGTTGTTAGTCGGTCATCTTTTGGGATCACACTGGTCAGTTGGCGGCATCTTTAGTATTTTCA CCGCTGCCATCCTCATAGCAGTCCTAGCAATTATCTTCCTCGGCCAAGAAACCATGGGCGTGAAACTTGCCGACACGCTT GAATAG
Upstream 100 bases:
>100_bases ATATTGAAATTTTCATTGACATCACGGTTTGTTTTTGGTGAAATAGTAAACAAATCTAGGGTGTCAAGACACCCTAATCT TCATTAAAGGAGGAGCGAAA
Downstream 100 bases:
>100_bases TCTCAACAGACAACAAAAAAGCCTTGTAATTTGCGGGAATTCCCGCAGACTGCAAGGCTTTTTTACTGAAGTTAACGCCG TAATGCGCGAGTAACCGTTT
Product: major facilitator superfamily permease
Products: Proton [Cytoplasm]; 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MSKKPSGHTRLIVGIGVAWLFDAMDVGMLSFVIAALHSEWQLSTVQMGWIGSVSSIGMAVGAILFGMMADRFGRKAILIL TLLVFSIGSGISAFATSYGIFLGLRFIIGAGLGGELPVASTLVSESVPVEKRGRSVVLLESFWAAGWLLAAIISYFIMPI WGWRVAVFATGLAGLYAFYFREGINESHVFKKVARPGLLKTLSTLWRPPYVRATLMLWIVWFMVVFSYYGMFLWLPSVMV LKGFSLINSFGYVLIMTLAQLPGYFVAAWLIEKWGRKMVLSLFLLGTAASALGFGLATGLPMLLTAGMLLSFFNLGAWGA LYAYSPEQYPTVVRSSGSGMAAGIGRIGGVVGPLLVGHLLGSHWSVGGIFSIFTAAILIAVLAIIFLGQETMGVKLADTL E
Sequences:
>Translated_401_residues MSKKPSGHTRLIVGIGVAWLFDAMDVGMLSFVIAALHSEWQLSTVQMGWIGSVSSIGMAVGAILFGMMADRFGRKAILIL TLLVFSIGSGISAFATSYGIFLGLRFIIGAGLGGELPVASTLVSESVPVEKRGRSVVLLESFWAAGWLLAAIISYFIMPI WGWRVAVFATGLAGLYAFYFREGINESHVFKKVARPGLLKTLSTLWRPPYVRATLMLWIVWFMVVFSYYGMFLWLPSVMV LKGFSLINSFGYVLIMTLAQLPGYFVAAWLIEKWGRKMVLSLFLLGTAASALGFGLATGLPMLLTAGMLLSFFNLGAWGA LYAYSPEQYPTVVRSSGSGMAAGIGRIGGVVGPLLVGHLLGSHWSVGGIFSIFTAAILIAVLAIIFLGQETMGVKLADTL E >Mature_400_residues SKKPSGHTRLIVGIGVAWLFDAMDVGMLSFVIAALHSEWQLSTVQMGWIGSVSSIGMAVGAILFGMMADRFGRKAILILT LLVFSIGSGISAFATSYGIFLGLRFIIGAGLGGELPVASTLVSESVPVEKRGRSVVLLESFWAAGWLLAAIISYFIMPIW GWRVAVFATGLAGLYAFYFREGINESHVFKKVARPGLLKTLSTLWRPPYVRATLMLWIVWFMVVFSYYGMFLWLPSVMVL KGFSLINSFGYVLIMTLAQLPGYFVAAWLIEKWGRKMVLSLFLLGTAASALGFGLATGLPMLLTAGMLLSFFNLGAWGAL YAYSPEQYPTVVRSSGSGMAAGIGRIGGVVGPLLVGHLLGSHWSVGGIFSIFTAAILIAVLAIIFLGQETMGVKLADTLE
Specific function: Could Be A Transporter For 3-Phenylpropionate (Hydrocinnamic Acid). [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=440, Percent_Identity=29.5454545454545, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI213021148, Length=452, Percent_Identity=25.6637168141593, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI166064021, Length=407, Percent_Identity=25.5528255528256, Blast_Score=100, Evalue=4e-21, Organism=Homo sapiens, GI90669191, Length=395, Percent_Identity=27.5949367088608, Blast_Score=99, Evalue=6e-21, Organism=Homo sapiens, GI24497497, Length=395, Percent_Identity=27.5949367088608, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI7662270, Length=164, Percent_Identity=34.7560975609756, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI216548223, Length=164, Percent_Identity=35.3658536585366, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI24497490, Length=416, Percent_Identity=24.0384615384615, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI166197673, Length=377, Percent_Identity=27.3209549071618, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI31542327, Length=391, Percent_Identity=25.3196930946292, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI73695465, Length=164, Percent_Identity=32.3170731707317, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI262399383, Length=108, Percent_Identity=39.8148148148148, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI4507005, Length=419, Percent_Identity=23.3890214797136, Blast_Score=77, Evalue=2e-14, Organism=Escherichia coli, GI87081723, Length=373, Percent_Identity=30.5630026809651, Blast_Score=131, Evalue=6e-32, Organism=Escherichia coli, GI87082404, Length=387, Percent_Identity=25.3229974160207, Blast_Score=116, Evalue=2e-27, Organism=Escherichia coli, GI87082231, Length=174, Percent_Identity=30.4597701149425, Blast_Score=92, Evalue=6e-20, Organism=Escherichia coli, GI87082159, Length=375, Percent_Identity=26.4, Blast_Score=85, Evalue=8e-18, Organism=Escherichia coli, GI1788068, Length=385, Percent_Identity=23.8961038961039, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1788074, Length=388, Percent_Identity=25, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1786229, Length=431, Percent_Identity=22.969837587007, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI1790550, Length=343, Percent_Identity=24.4897959183673, Blast_Score=63, Evalue=4e-11, Organism=Caenorhabditis elegans, GI32564663, Length=444, Percent_Identity=28.3783783783784, Blast_Score=163, Evalue=1e-40, Organism=Caenorhabditis elegans, GI193209824, Length=402, Percent_Identity=24.3781094527363, Blast_Score=81, Evalue=9e-16, Organism=Caenorhabditis elegans, GI71986689, Length=442, Percent_Identity=24.6606334841629, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI193202825, Length=442, Percent_Identity=24.6606334841629, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI71996338, Length=210, Percent_Identity=29.5238095238095, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17542342, Length=412, Percent_Identity=23.3009708737864, Blast_Score=69, Evalue=6e-12, Organism=Caenorhabditis elegans, GI71980822, Length=358, Percent_Identity=24.8603351955307, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI193207197, Length=414, Percent_Identity=24.1545893719807, Blast_Score=65, Evalue=8e-11, Organism=Drosophila melanogaster, GI19922874, Length=432, Percent_Identity=25.9259259259259, Blast_Score=151, Evalue=6e-37, Organism=Drosophila melanogaster, GI19922616, Length=412, Percent_Identity=28.6407766990291, Blast_Score=102, Evalue=4e-22, Organism=Drosophila melanogaster, GI24640198, Length=457, Percent_Identity=23.6323851203501, Blast_Score=99, Evalue=5e-21, Organism=Drosophila melanogaster, GI24640196, Length=457, Percent_Identity=23.6323851203501, Blast_Score=99, Evalue=5e-21, Organism=Drosophila melanogaster, GI24640200, Length=457, Percent_Identity=23.6323851203501, Blast_Score=99, Evalue=5e-21, Organism=Drosophila melanogaster, GI24649618, Length=413, Percent_Identity=24.455205811138, Blast_Score=90, Evalue=2e-18, Organism=Drosophila melanogaster, GI24649616, Length=362, Percent_Identity=24.8618784530387, Blast_Score=86, Evalue=6e-17, Organism=Drosophila melanogaster, GI24649622, Length=401, Percent_Identity=24.1895261845387, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI21355657, Length=421, Percent_Identity=25.41567695962, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI62484254, Length=420, Percent_Identity=23.8095238095238, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI24668456, Length=389, Percent_Identity=23.3933161953728, Blast_Score=69, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 43203; Mature: 43072
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKPSGHTRLIVGIGVAWLFDAMDVGMLSFVIAALHSEWQLSTVQMGWIGSVSSIGMAV CCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHH GAILFGMMADRFGRKAILILTLLVFSIGSGISAFATSYGIFLGLRFIIGAGLGGELPVAS HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH TLVSESVPVEKRGRSVVLLESFWAAGWLLAAIISYFIMPIWGWRVAVFATGLAGLYAFYF HHHHCCCCHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REGINESHVFKKVARPGLLKTLSTLWRPPYVRATLMLWIVWFMVVFSYYGMFLWLPSVMV HHCCCHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKGFSLINSFGYVLIMTLAQLPGYFVAAWLIEKWGRKMVLSLFLLGTAASALGFGLATGL HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PMLLTAGMLLSFFNLGAWGALYAYSPEQYPTVVRSSGSGMAAGIGRIGGVVGPLLVGHLL HHHHHHHHHHHHHHCCCCHHHEECCCHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH GSHWSVGGIFSIFTAAILIAVLAIIFLGQETMGVKLADTLE HCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCEEHHCCCC >Mature Secondary Structure SKKPSGHTRLIVGIGVAWLFDAMDVGMLSFVIAALHSEWQLSTVQMGWIGSVSSIGMAV CCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHH GAILFGMMADRFGRKAILILTLLVFSIGSGISAFATSYGIFLGLRFIIGAGLGGELPVAS HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH TLVSESVPVEKRGRSVVLLESFWAAGWLLAAIISYFIMPIWGWRVAVFATGLAGLYAFYF HHHHCCCCHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REGINESHVFKKVARPGLLKTLSTLWRPPYVRATLMLWIVWFMVVFSYYGMFLWLPSVMV HHCCCHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKGFSLINSFGYVLIMTLAQLPGYFVAAWLIEKWGRKMVLSLFLLGTAASALGFGLATGL HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PMLLTAGMLLSFFNLGAWGALYAYSPEQYPTVVRSSGSGMAAGIGRIGGVVGPLLVGHLL HHHHHHHHHHHHHHCCCCHHHEECCCHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH GSHWSVGGIFSIFTAAILIAVLAIIFLGQETMGVKLADTLE HCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCEEHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; 3-(3-hydroxyphenyl)propionate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + 3-(3-hydroxyphenyl)propionate [Periplasm] = Proton [Cytoplasm] + 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9274031; 9384377 [H]