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The map label for this gene is 116494880

Identifier: 116494880

GI number: 116494880

Start: 1382107

End: 1382349

Strand: Direct

Name: 116494880

Synonym: LSEI_1394

Alternate gene names: NA

Gene position: 1382107-1382349 (Clockwise)

Preceding gene: 116494879

Following gene: 116494881

Centisome position: 47.74

GC content: 42.8

Gene sequence:

>243_bases
ATGCATCGGACTTTTTACGAATATCTCATGACCCTGCGTAACCCCAATGACCATAGTGAAATCGCTGAATTTGCGAAAAA
TGCCTTTTTGGATCAAAGCTTTCCTAAGCAAGAAAAGGATTACCATCGACTAAGCGATTATCTGGAACTAAACGGCAATT
ATTTGCCAAGCATGGCCGTTTTTGACGAAACGTATCGCGCCTATGAGGCGAGTGAAAGCACAGGAGGCGATTCGTATCAA
TAA

Upstream 100 bases:

>100_bases
AGCCTGAGCACCAACAGTTTTATGCTAAGAATCCCCGCCGTTATGCATTAGAACATGCGCAACGGCAGGCTTTTATCGAC
AAAACATGGAAGGATCAATA

Downstream 100 bases:

>100_bases
ACGTAGATTACCGTGGTGGGCCGTTTTGATAATTGTCATCGTCGCACTTGGCGGTGGTGTCGCAGGCGGTTACGCGCTCT
CTTATCAGCAAGCTCAACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MHRTFYEYLMTLRNPNDHSEIAEFAKNAFLDQSFPKQEKDYHRLSDYLELNGNYLPSMAVFDETYRAYEASESTGGDSYQ

Sequences:

>Translated_80_residues
MHRTFYEYLMTLRNPNDHSEIAEFAKNAFLDQSFPKQEKDYHRLSDYLELNGNYLPSMAVFDETYRAYEASESTGGDSYQ
>Mature_80_residues
MHRTFYEYLMTLRNPNDHSEIAEFAKNAFLDQSFPKQEKDYHRLSDYLELNGNYLPSMAVFDETYRAYEASESTGGDSYQ

Specific function: Unknown

COG id: COG4479

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0346 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1394_LACC3 (Q039F0)

Other databases:

- EMBL:   CP000423
- RefSeq:   YP_806614.1
- ProteinModelPortal:   Q039F0
- SMR:   Q039F0
- STRING:   Q039F0
- GeneID:   4419735
- GenomeReviews:   CP000423_GR
- KEGG:   lca:LSEI_1394
- eggNOG:   COG4479
- HOGENOM:   HBG337371
- OMA:   ELNAGYL
- ProtClustDB:   PRK13672
- BioCyc:   LCAS321967:LSEI_1394-MONOMER
- HAMAP:   MF_01538
- InterPro:   IPR010673
- InterPro:   IPR023089
- PIRSF:   PIRSF037262

Pfam domain/function: PF06855 DUF1250

EC number: NA

Molecular weight: Translated: 9459; Mature: 9459

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRTFYEYLMTLRNPNDHSEIAEFAKNAFLDQSFPKQEKDYHRLSDYLELNGNYLPSMAV
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHH
FDETYRAYEASESTGGDSYQ
HHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MHRTFYEYLMTLRNPNDHSEIAEFAKNAFLDQSFPKQEKDYHRLSDYLELNGNYLPSMAV
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHH
FDETYRAYEASESTGGDSYQ
HHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA