Click here to switch to the map view.

The map label for this gene is 116494800

Identifier: 116494800

GI number: 116494800

Start: 1295120

End: 1295401

Strand: Direct

Name: 116494800

Synonym: LSEI_1311

Alternate gene names: NA

Gene position: 1295120-1295401 (Clockwise)

Preceding gene: 116494799

Following gene: 116494801

Centisome position: 44.73

GC content: 43.97

Gene sequence:

>282_bases
ATGAAACCTAATTATGCCTATCCACTCGACATTGACTGGACAACTGCCGAAAAAGTAAAAGTCACGACCTTTTATACCTT
AGTCGAAGATGCATATGAACACGGTGTTGATCGTGATAATCTGCTTGCAGCGTACCGTGGATTTAAGGAAGTTGTGCCAG
ATAAAGGAACCGAGCGCAAATTGGATCGGGAGTTTGAAGCACTGTCCGGTTATTCCATGTATACTGTTATACAGATGGCC
CGCAAAGGCGTGAGCCAAAAGATTAGGGTAAGGGTGAGTTAA

Upstream 100 bases:

>100_bases
GCCACAGTTGCTGGTTCGGATGATGAGGAAGCTGCGTTGAGTCAAACGAAACAAACTGTACAGGATCAAATTAAGGCGAT
AGAACAAGGAGCTAGTAAAC

Downstream 100 bases:

>100_bases
CCATGACACAAGATCCAGAAATGTTGCGGCAAACGATTATTAGCTGGTTTGCTGCTAGTCGCAAACAAATTCTAACCGCA
ATGGCCGCCCCATTAGATGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MKPNYAYPLDIDWTTAEKVKVTTFYTLVEDAYEHGVDRDNLLAAYRGFKEVVPDKGTERKLDREFEALSGYSMYTVIQMA
RKGVSQKIRVRVS

Sequences:

>Translated_93_residues
MKPNYAYPLDIDWTTAEKVKVTTFYTLVEDAYEHGVDRDNLLAAYRGFKEVVPDKGTERKLDREFEALSGYSMYTVIQMA
RKGVSQKIRVRVS
>Mature_93_residues
MKPNYAYPLDIDWTTAEKVKVTTFYTLVEDAYEHGVDRDNLLAAYRGFKEVVPDKGTERKLDREFEALSGYSMYTVIQMA
RKGVSQKIRVRVS

Specific function: Unknown

COG id: COG4476

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0223 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007920
- ProDom:   PD062738 [H]

Pfam domain/function: PF05256 UPF0223 [H]

EC number: NA

Molecular weight: Translated: 10771; Mature: 10771

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPNYAYPLDIDWTTAEKVKVTTFYTLVEDAYEHGVDRDNLLAAYRGFKEVVPDKGTERK
CCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHH
LDREFEALSGYSMYTVIQMARKGVSQKIRVRVS
HHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEC
>Mature Secondary Structure
MKPNYAYPLDIDWTTAEKVKVTTFYTLVEDAYEHGVDRDNLLAAYRGFKEVVPDKGTERK
CCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHH
LDREFEALSGYSMYTVIQMARKGVSQKIRVRVS
HHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA