| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is suhB [H]
Identifier: 116494801
GI number: 116494801
Start: 1295404
End: 1296195
Strand: Direct
Name: suhB [H]
Synonym: LSEI_1312
Alternate gene names: 116494801
Gene position: 1295404-1296195 (Clockwise)
Preceding gene: 116494800
Following gene: 116494802
Centisome position: 44.74
GC content: 48.48
Gene sequence:
>792_bases ATGACACAAGATCCAGAAATGTTGCGGCAAACGATTATTAGCTGGTTTGCTGCTAGTCGCAAACAAATTCTAACCGCAAT GGCCGCCCCATTAGATGTTGCCACCAAAAGTAATCGCAACGATTTGGTCACCAATGTCGACAAGGCGAATCAACAATTTT TGATTGGCAAAATCAGAGAGGCGTATCCTGAAGCCGGTATCATTGGCGAAGAAGGACATGAGCACGATGACACTGATTTA GCTGGTCTCGTCTTCTTTGTCGATCCAATAGACGGCACCATGAATTTCGTCAAACAACAAGCACATTTTGCCATTATGAT TGGTGTTTATCAGGACGGTGAACCTGTTGTCGGCGCGATTATGGACGTCATGCGAAATGAAGTGCTTAGCGGGGGCCCAA TGATTCCCGTCACCCATGCTGGACAACAAGTGAAGGTTTTGCCAGACTTGCCGCTTAAAGATGGCTTGTTAGGTGTCAAT GGTCCGATGACGATTAAGAATCGGTTGCATCTAGGCGATATCGCGTTGACCAGTTCTGGCGCTAGAATGAGCGGCAGTGC AGGAATGGAATTCATCGAAATTGCGCTGGGTCGACAGATCGGGTATGTGTCTTACTTACAGCCGTGGGACGTAGCGGCTG GAATGGCGATTACTAAGGGTCTTGGCGTTGTTTTCAGCCGTGAAGATGGCGCACCAATCAACTTGCAGCAACCAGGCGTT GTGGTTGCTGCTACACCAAAGGCACATCAAACGATTTTGACGATGATGGCGGATGGCGGCAAAGAGGCTTAA
Upstream 100 bases:
>100_bases ATCGGGAGTTTGAAGCACTGTCCGGTTATTCCATGTATACTGTTATACAGATGGCCCGCAAAGGCGTGAGCCAAAAGATT AGGGTAAGGGTGAGTTAACC
Downstream 100 bases:
>100_bases GCTAAACCAATAGACAAATCATGATTTCTGGCGCAAACTAAGTGGCGCCAGTTTTTTTCTTAATAAAAGGGTCGCGTGAT AGCCCGCTTTATAAGAAAAT
Product: fructose-1 6-bisphosphatase
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MTQDPEMLRQTIISWFAASRKQILTAMAAPLDVATKSNRNDLVTNVDKANQQFLIGKIREAYPEAGIIGEEGHEHDDTDL AGLVFFVDPIDGTMNFVKQQAHFAIMIGVYQDGEPVVGAIMDVMRNEVLSGGPMIPVTHAGQQVKVLPDLPLKDGLLGVN GPMTIKNRLHLGDIALTSSGARMSGSAGMEFIEIALGRQIGYVSYLQPWDVAAGMAITKGLGVVFSREDGAPINLQQPGV VVAATPKAHQTILTMMADGGKEA
Sequences:
>Translated_263_residues MTQDPEMLRQTIISWFAASRKQILTAMAAPLDVATKSNRNDLVTNVDKANQQFLIGKIREAYPEAGIIGEEGHEHDDTDL AGLVFFVDPIDGTMNFVKQQAHFAIMIGVYQDGEPVVGAIMDVMRNEVLSGGPMIPVTHAGQQVKVLPDLPLKDGLLGVN GPMTIKNRLHLGDIALTSSGARMSGSAGMEFIEIALGRQIGYVSYLQPWDVAAGMAITKGLGVVFSREDGAPINLQQPGV VVAATPKAHQTILTMMADGGKEA >Mature_262_residues TQDPEMLRQTIISWFAASRKQILTAMAAPLDVATKSNRNDLVTNVDKANQQFLIGKIREAYPEAGIIGEEGHEHDDTDLA GLVFFVDPIDGTMNFVKQQAHFAIMIGVYQDGEPVVGAIMDVMRNEVLSGGPMIPVTHAGQQVKVLPDLPLKDGLLGVNG PMTIKNRLHLGDIALTSSGARMSGSAGMEFIEIALGRQIGYVSYLQPWDVAAGMAITKGLGVVFSREDGAPINLQQPGVV VAATPKAHQTILTMMADGGKEA
Specific function: Unknown
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI7657236, Length=241, Percent_Identity=27.3858921161826, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI221625487, Length=236, Percent_Identity=27.5423728813559, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI5031789, Length=236, Percent_Identity=27.5423728813559, Blast_Score=69, Evalue=5e-12, Organism=Escherichia coli, GI1788882, Length=231, Percent_Identity=32.034632034632, Blast_Score=108, Evalue=3e-25, Organism=Caenorhabditis elegans, GI193202570, Length=244, Percent_Identity=28.6885245901639, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI193202572, Length=239, Percent_Identity=29.2887029288703, Blast_Score=72, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6320493, Length=203, Percent_Identity=29.064039408867, Blast_Score=70, Evalue=4e-13, Organism=Drosophila melanogaster, GI24664922, Length=245, Percent_Identity=28.5714285714286, Blast_Score=98, Evalue=7e-21, Organism=Drosophila melanogaster, GI24664926, Length=235, Percent_Identity=28.0851063829787, Blast_Score=92, Evalue=4e-19, Organism=Drosophila melanogaster, GI21357957, Length=248, Percent_Identity=27.8225806451613, Blast_Score=85, Evalue=5e-17, Organism=Drosophila melanogaster, GI24664918, Length=234, Percent_Identity=25.2136752136752, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI21357329, Length=235, Percent_Identity=28.5106382978723, Blast_Score=76, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.25 [H]
Molecular weight: Translated: 28134; Mature: 28003
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: PS00629 IMP_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQDPEMLRQTIISWFAASRKQILTAMAAPLDVATKSNRNDLVTNVDKANQQFLIGKIRE CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHH AYPEAGIIGEEGHEHDDTDLAGLVFFVDPIDGTMNFVKQQAHFAIMIGVYQDGEPVVGAI HCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHCCCEEEEEEEECCCCHHHHHH MDVMRNEVLSGGPMIPVTHAGQQVKVLPDLPLKDGLLGVNGPMTIKNRLHLGDIALTSSG HHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCCEEECCCCEEECCEEEECEEEEECCC ARMSGSAGMEFIEIALGRQIGYVSYLQPWDVAAGMAITKGLGVVFSREDGAPINLQQPGV CCCCCCCCHHHHHHHHCCCCCEEECCCCHHHHHHHHHHCCCEEEEECCCCCCEEECCCCE VVAATPKAHQTILTMMADGGKEA EEEECCCHHHHHHHHHCCCCCCC >Mature Secondary Structure TQDPEMLRQTIISWFAASRKQILTAMAAPLDVATKSNRNDLVTNVDKANQQFLIGKIRE CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHH AYPEAGIIGEEGHEHDDTDLAGLVFFVDPIDGTMNFVKQQAHFAIMIGVYQDGEPVVGAI HCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHCCCEEEEEEEECCCCHHHHHH MDVMRNEVLSGGPMIPVTHAGQQVKVLPDLPLKDGLLGVNGPMTIKNRLHLGDIALTSSG HHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCCEEECCCCEEECCEEEECEEEEECCC ARMSGSAGMEFIEIALGRQIGYVSYLQPWDVAAGMAITKGLGVVFSREDGAPINLQQPGV CCCCCCCCHHHHHHHHCCCCCEEECCCCHHHHHHHHHHCCCEEEEECCCCCCEEECCCCE VVAATPKAHQTILTMMADGGKEA EEEECCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969500; 9384377 [H]