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The map label for this gene is 116494685

Identifier: 116494685

GI number: 116494685

Start: 1171686

End: 1172573

Strand: Direct

Name: 116494685

Synonym: LSEI_1190

Alternate gene names: NA

Gene position: 1171686-1172573 (Clockwise)

Preceding gene: 116494684

Following gene: 116494690

Centisome position: 40.47

GC content: 43.81

Gene sequence:

>888_bases
ATGCGAAAGGAGCAGCAAACACTGCGGATCTTGGGGGATAAGGTCCGTTATTATCGCAAGTTGAAGGGTCTATCGCAGGC
CGAGCTGGCGGCAAATATTTGCACGCAAGCTACAATTAGCTTGATTGAGAAGCGTAATAAAGTGCCAAGCATGAATATTT
TGATGCGATTAATTGGTCGTTTAGGAATTCAGCTGGATGACATTGTTGTCGAGCATCATGATCGTGTTCAGCAACTGTTG
ACCGGTATTGATTTTCAGATTCAGCACCACCAATATGCACTTGCTGCGGAGAATTTGAGTAAGATTCGGTTGGATAAGAT
CAAGAATGATGATGACCAAAAGCGCTACTATTATTATCAAGGAATTATCGAACTATTCAAAAACAATGCACCGGATGAGG
CGATTTATTTCTTTGGCCGAGTCCTGAGCCCGTTAGTTAACTCCGAACGTGACCTTTTTGGTATTCTAGCAACGCTGGGG
TTAGGATTGGCCTATGCTGCCAAGCATACGTTTGACCGATCTCGAGTCTATATTGATCAAGCGTTACGCATGTTGAAACA
CGTGCCACTGTCTGACAGTAAATATCTGGATGTTGAGTTGACAATTTATTGGCACATTGCCCGAATTTATTATGAACTCA
GTGACTTTAAGGCCGTCCTCAAATACACTGATCTGGGTGTTCGAGAGGCAGTCAAGCACGATAAACTTTTCCTTCTAGAT
GAATTGTTTGCATTACAAGCAAGGGCGCTCAAGCTTTTGGGTGACCCCGATGCCTCTAAAAGTTATCAAATTGCGATCGC
ATTTGCCCGAGTGACAGGCTCAACGCCTTTGGAAACGAGCTTAGTCGCAGAAATGGTCTCGCAAAAACCAAATATTGAGA
CAGCTTGA

Upstream 100 bases:

>100_bases
TTAAAACCACTTATCCGTATAATTGACTCTAGGTTAAGGGTTAAGCCTTGCCAAAATTCTATGTTGATGCACTTAACTGA
AACACTGGGGAGTGATAAGT

Downstream 100 bases:

>100_bases
AAAATCCTCATAGATGCTGCCGTCTATGACGAAAAAAATACCTGAAAACATCGGCTGATTTAAGAGCCAGATGTCTCAGG
TATTTTTTTATTTTTTAAGC

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Regulator; Helix-Turn-Helix Domain-Containing Protein; TPR Repeat/Helix-Turn-Helix Domain-Containing Protein; Cro/CI Family Transcriptional Regulator; Transcriptional Regulator Cro/CI Family; Helix-Turn-Helix Domain-Containing ProteinTPR Repeat

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MRKEQQTLRILGDKVRYYRKLKGLSQAELAANICTQATISLIEKRNKVPSMNILMRLIGRLGIQLDDIVVEHHDRVQQLL
TGIDFQIQHHQYALAAENLSKIRLDKIKNDDDQKRYYYYQGIIELFKNNAPDEAIYFFGRVLSPLVNSERDLFGILATLG
LGLAYAAKHTFDRSRVYIDQALRMLKHVPLSDSKYLDVELTIYWHIARIYYELSDFKAVLKYTDLGVREAVKHDKLFLLD
ELFALQARALKLLGDPDASKSYQIAIAFARVTGSTPLETSLVAEMVSQKPNIETA

Sequences:

>Translated_295_residues
MRKEQQTLRILGDKVRYYRKLKGLSQAELAANICTQATISLIEKRNKVPSMNILMRLIGRLGIQLDDIVVEHHDRVQQLL
TGIDFQIQHHQYALAAENLSKIRLDKIKNDDDQKRYYYYQGIIELFKNNAPDEAIYFFGRVLSPLVNSERDLFGILATLG
LGLAYAAKHTFDRSRVYIDQALRMLKHVPLSDSKYLDVELTIYWHIARIYYELSDFKAVLKYTDLGVREAVKHDKLFLLD
ELFALQARALKLLGDPDASKSYQIAIAFARVTGSTPLETSLVAEMVSQKPNIETA
>Mature_295_residues
MRKEQQTLRILGDKVRYYRKLKGLSQAELAANICTQATISLIEKRNKVPSMNILMRLIGRLGIQLDDIVVEHHDRVQQLL
TGIDFQIQHHQYALAAENLSKIRLDKIKNDDDQKRYYYYQGIIELFKNNAPDEAIYFFGRVLSPLVNSERDLFGILATLG
LGLAYAAKHTFDRSRVYIDQALRMLKHVPLSDSKYLDVELTIYWHIARIYYELSDFKAVLKYTDLGVREAVKHDKLFLLD
ELFALQARALKLLGDPDASKSYQIAIAFARVTGSTPLETSLVAEMVSQKPNIETA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33851; Mature: 33851

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKEQQTLRILGDKVRYYRKLKGLSQAELAANICTQATISLIEKRNKVPSMNILMRLIGR
CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LGIQLDDIVVEHHDRVQQLLTGIDFQIQHHQYALAAENLSKIRLDKIKNDDDQKRYYYYQ
HCCCHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
GIIELFKNNAPDEAIYFFGRVLSPLVNSERDLFGILATLGLGLAYAAKHTFDRSRVYIDQ
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
ALRMLKHVPLSDSKYLDVELTIYWHIARIYYELSDFKAVLKYTDLGVREAVKHDKLFLLD
HHHHHHCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHH
ELFALQARALKLLGDPDASKSYQIAIAFARVTGSTPLETSLVAEMVSQKPNIETA
HHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRKEQQTLRILGDKVRYYRKLKGLSQAELAANICTQATISLIEKRNKVPSMNILMRLIGR
CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LGIQLDDIVVEHHDRVQQLLTGIDFQIQHHQYALAAENLSKIRLDKIKNDDDQKRYYYYQ
HCCCHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
GIIELFKNNAPDEAIYFFGRVLSPLVNSERDLFGILATLGLGLAYAAKHTFDRSRVYIDQ
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
ALRMLKHVPLSDSKYLDVELTIYWHIARIYYELSDFKAVLKYTDLGVREAVKHDKLFLLD
HHHHHHCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHH
ELFALQARALKLLGDPDASKSYQIAIAFARVTGSTPLETSLVAEMVSQKPNIETA
HHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA