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The map label for this gene is yniC [H]

Identifier: 116494684

GI number: 116494684

Start: 1170811

End: 1171464

Strand: Direct

Name: yniC [H]

Synonym: LSEI_1189

Alternate gene names: 116494684

Gene position: 1170811-1171464 (Clockwise)

Preceding gene: 116494683

Following gene: 116494685

Centisome position: 40.44

GC content: 47.4

Gene sequence:

>654_bases
TTGATTAAGGCTATTATTTTTGATATGGATGGCGTGATTGTCGACTCAGAGCCGTGTGCCTTAGAAAATCGACTGGCCTA
TTTACGTCAGGTGGGGATTGAAGCCGATGATCGCAAGTTGGCTGGGTTATTAGGGCGCAATATGGCCGATGTTTGGCGCA
TCATTGCGCCTTCGAAAGATGCTCTGCAACTTCAAGCAGGTTATGTGGCCTACAAACAGGCCCATCCGATTCCGTATGCA
AAGATTGTAATGCCGGGTGCACGGCCAACTTTACAATGGTTGAAGCAGCATGATATCAAAACTGCCATTGCATCAGCCTC
AGATCTGACCTTTATCGAAAAGATGTATACAGAGACAGGCTTGCGTCAGTATTTTGATCAATTGCTTAGCGGCGCCGACT
TCACACGCACTAAACCGGCACCTGATGTCTACTTGGCAGCGCTGCAGGTGCTGGACGTGGCTGCTGAGGAAGCGATCGCG
GTGGAAGATTCAACGCTTGGTATTGCCGCCGCAAAAGCTGCTGGTCTATATACCTTAGCAGTCCCGCTACGTGATCCCCG
GTTCACTCAAAATCAGCAAGCAGCAGATCAACGGATTAAGAAACTAACCGATATTATGGGAATAGTTGATGATAAAAATG
CTTATAATCAATAA

Upstream 100 bases:

>100_bases
ATTGGCCCTGCGAGCTGATTTGCCACAGCCAATTGCCGATTATATTCAGCAAATTGTGGATCTTTTTTAGTCCATATGGT
CAATAGAAGGGAGCACGGCT

Downstream 100 bases:

>100_bases
GCATTTTTATTTTGCGTTTATATTATAAAATTTATATCTCGTGGCTTTTAGATACAAAAGATCAAAATCTAAAAAGATAT
TTTTTAAAAATTGAATAAAT

Product: HAD family sugar phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MIKAIIFDMDGVIVDSEPCALENRLAYLRQVGIEADDRKLAGLLGRNMADVWRIIAPSKDALQLQAGYVAYKQAHPIPYA
KIVMPGARPTLQWLKQHDIKTAIASASDLTFIEKMYTETGLRQYFDQLLSGADFTRTKPAPDVYLAALQVLDVAAEEAIA
VEDSTLGIAAAKAAGLYTLAVPLRDPRFTQNQQAADQRIKKLTDIMGIVDDKNAYNQ

Sequences:

>Translated_217_residues
MIKAIIFDMDGVIVDSEPCALENRLAYLRQVGIEADDRKLAGLLGRNMADVWRIIAPSKDALQLQAGYVAYKQAHPIPYA
KIVMPGARPTLQWLKQHDIKTAIASASDLTFIEKMYTETGLRQYFDQLLSGADFTRTKPAPDVYLAALQVLDVAAEEAIA
VEDSTLGIAAAKAAGLYTLAVPLRDPRFTQNQQAADQRIKKLTDIMGIVDDKNAYNQ
>Mature_217_residues
MIKAIIFDMDGVIVDSEPCALENRLAYLRQVGIEADDRKLAGLLGRNMADVWRIIAPSKDALQLQAGYVAYKQAHPIPYA
KIVMPGARPTLQWLKQHDIKTAIASASDLTFIEKMYTETGLRQYFDQLLSGADFTRTKPAPDVYLAALQVLDVAAEEAIA
VEDSTLGIAAAKAAGLYTLAVPLRDPRFTQNQQAADQRIKKLTDIMGIVDDKNAYNQ

Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates 2-deoxyglucose 6-phosphate and mannose 6- phosphate [H]

COG id: COG0637

COG function: function code R; Predicted phosphatase/phosphohexomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

Organism=Escherichia coli, GI1788021, Length=213, Percent_Identity=31.924882629108, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1789046, Length=188, Percent_Identity=27.1276595744681, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006402
- InterPro:   IPR005833
- InterPro:   IPR023198 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 23910; Mature: 23910

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKAIIFDMDGVIVDSEPCALENRLAYLRQVGIEADDRKLAGLLGRNMADVWRIIAPSKD
CCEEEEEECCCEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHCCCCH
ALQLQAGYVAYKQAHPIPYAKIVMPGARPTLQWLKQHDIKTAIASASDLTFIEKMYTETG
HHHHHHCEEEHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LRQYFDQLLSGADFTRTKPAPDVYLAALQVLDVAAEEAIAVEDSTLGIAAAKAAGLYTLA
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHCCEEEEE
VPLRDPRFTQNQQAADQRIKKLTDIMGIVDDKNAYNQ
EECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MIKAIIFDMDGVIVDSEPCALENRLAYLRQVGIEADDRKLAGLLGRNMADVWRIIAPSKD
CCEEEEEECCCEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHCCCCH
ALQLQAGYVAYKQAHPIPYAKIVMPGARPTLQWLKQHDIKTAIASASDLTFIEKMYTETG
HHHHHHCEEEHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LRQYFDQLLSGADFTRTKPAPDVYLAALQVLDVAAEEAIAVEDSTLGIAAAKAAGLYTLA
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHCCEEEEE
VPLRDPRFTQNQQAADQRIKKLTDIMGIVDDKNAYNQ
EECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]