| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is 116494422
Identifier: 116494422
GI number: 116494422
Start: 890403
End: 890813
Strand: Direct
Name: 116494422
Synonym: LSEI_0915
Alternate gene names: NA
Gene position: 890403-890813 (Clockwise)
Preceding gene: 116494421
Following gene: 116494423
Centisome position: 30.75
GC content: 43.8
Gene sequence:
>411_bases ATGGAAACAAAACGTTACCCTATCGCGGTTGAATCTTTTCACTATGATTTGGTTAAGCAAGGAACACCGGTTAAGAACGA CTTGCAAGTTGCCATGCGCCAGATTGAATGGTCAGATCCCGCTAAACAAGATGAGTTGAAAAAAGGCAATCTTTTTCAGA TGATGATTCCATTTGACGTTGTCCCTGACGATGCCGGTTTTGAGATTTCTGGCAAAATTACCCAGATTGTGCAGGTTTTG GATTATTTTGGTGAGGCAAATGAATTGCCGCAAGCCGAACTTGGCAAACTAAGCCGGCCATTGGTTGAAACCATTGAAAC GTTGACTTACCAAGTGACCGCAGTTGCCTTGGATCAAGGGGTTAACCTTCAGTTTGGTGCCAGTGATGAACAACCGGGCC AAACAAAATAA
Upstream 100 bases:
>100_bases CTCGAGTAGAAACTGGCATGTGAATGGCTTTGACCGTTATGGAAAAGGACGCTTACAAGAAGTTTTCTCGGTTGGCAAGC GCGTTTAGGAGGCTGTATTT
Downstream 100 bases:
>100_bases GACAAAGTTGAGTCATGATGAAAGGCGGCCGTTATCAGCCGCTTTTTTGATGAGCGCGAATGCATTCTGACGACAGGCGT TGTCTTTTAGCTCAATGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues METKRYPIAVESFHYDLVKQGTPVKNDLQVAMRQIEWSDPAKQDELKKGNLFQMMIPFDVVPDDAGFEISGKITQIVQVL DYFGEANELPQAELGKLSRPLVETIETLTYQVTAVALDQGVNLQFGASDEQPGQTK
Sequences:
>Translated_136_residues METKRYPIAVESFHYDLVKQGTPVKNDLQVAMRQIEWSDPAKQDELKKGNLFQMMIPFDVVPDDAGFEISGKITQIVQVL DYFGEANELPQAELGKLSRPLVETIETLTYQVTAVALDQGVNLQFGASDEQPGQTK >Mature_136_residues METKRYPIAVESFHYDLVKQGTPVKNDLQVAMRQIEWSDPAKQDELKKGNLFQMMIPFDVVPDDAGFEISGKITQIVQVL DYFGEANELPQAELGKLSRPLVETIETLTYQVTAVALDQGVNLQFGASDEQPGQTK
Specific function: Unknown
COG id: COG4835
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15231; Mature: 15231
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METKRYPIAVESFHYDLVKQGTPVKNDLQVAMRQIEWSDPAKQDELKKGNLFQMMIPFDV CCCCCCCEEHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCEE VPDDAGFEISGKITQIVQVLDYFGEANELPQAELGKLSRPLVETIETLTYQVTAVALDQG CCCCCCEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHEEEECCC VNLQFGASDEQPGQTK CCEEECCCCCCCCCCC >Mature Secondary Structure METKRYPIAVESFHYDLVKQGTPVKNDLQVAMRQIEWSDPAKQDELKKGNLFQMMIPFDV CCCCCCCEEHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCEE VPDDAGFEISGKITQIVQVLDYFGEANELPQAELGKLSRPLVETIETLTYQVTAVALDQG CCCCCCEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHEEEECCC VNLQFGASDEQPGQTK CCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA