| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is levE [H]
Identifier: 116493965
GI number: 116493965
Start: 403213
End: 403704
Strand: Direct
Name: levE [H]
Synonym: LSEI_0401
Alternate gene names: 116493965
Gene position: 403213-403704 (Clockwise)
Preceding gene: 116493964
Following gene: 116493966
Centisome position: 13.93
GC content: 45.93
Gene sequence:
>492_bases ATGACAGTCGTATTAGCACGAGTAGATCAACGTTTAGTTCATGGCATCGTTGTCAATCAATGGGCAGCTGAGGTGCAGCC GAAGCGCTATATGGTCATTGATGATGCTGTTAGTCAGGATGAAGACGTGAAAGCTAGCATGCGGTTGAGCAAACCAGCCG GCACAGGGATGTCTATCATCGACACTGAAAAAGCTTTGACGAATTTTAAAGCTGGTAAGTATGACGCCCAACGGGCATTC GTTATCGCAAAGGAGCCCAGCACCATGTTGAAATTGTTGGACGCTGGCATCGAAATTCCGCGTGTCGATATCGGTATCAT TTTTGCAGAAGACGGACGGACACAGATCAGCAAATTTGTTTCCGTTAATCAACAAGAAGTTGCTGATTTTAAAGAACTCG AAAAGCGCGGCGTCCCTGTGAACATTCGCTATGTACCCGCTGATTCACCCGAACCATTTGATAAGGCCATTGCAGGCAAA GACATTAAATAA
Upstream 100 bases:
>100_bases CAGACAAGTCGTTTTACCGCTTTCTGTTGTTGTTCGTCAGTCGGTTTAATCTTTTTTGAGAAAAATTGGTATCAATACCA AAAATATGGAGGAAATTAAT
Downstream 100 bases:
>100_bases TCAGCGAGTTCTTGGCTGAAGAACGCGCGAGGAGGAAACATCATGCCACATATTTTGCAAGATATCCTGATCATTTTCTT GGCATCATACGCAACGCTTG
Product: phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB
Products: NA
Alternate protein names: EIIB-Fru; PTS system fructose-specific EIIB component; p18 [H]
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MTVVLARVDQRLVHGIVVNQWAAEVQPKRYMVIDDAVSQDEDVKASMRLSKPAGTGMSIIDTEKALTNFKAGKYDAQRAF VIAKEPSTMLKLLDAGIEIPRVDIGIIFAEDGRTQISKFVSVNQQEVADFKELEKRGVPVNIRYVPADSPEPFDKAIAGK DIK
Sequences:
>Translated_163_residues MTVVLARVDQRLVHGIVVNQWAAEVQPKRYMVIDDAVSQDEDVKASMRLSKPAGTGMSIIDTEKALTNFKAGKYDAQRAF VIAKEPSTMLKLLDAGIEIPRVDIGIIFAEDGRTQISKFVSVNQQEVADFKELEKRGVPVNIRYVPADSPEPFDKAIAGK DIK >Mature_162_residues TVVLARVDQRLVHGIVVNQWAAEVQPKRYMVIDDAVSQDEDVKASMRLSKPAGTGMSIIDTEKALTNFKAGKYDAQRAFV IAKEPSTMLKLLDAGIEIPRVDIGIIFAEDGRTQISKFVSVNQQEVADFKELEKRGVPVNIRYVPADSPEPFDKAIAGKD IK
Specific function: LevD and levE act as negative regulators of the levanase operon. They may be involved in a PTS-mediated phosphorylation of a regulator [H]
COG id: COG3444
COG function: function code G; Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-4 domain [H]
Homologues:
Organism=Escherichia coli, GI1788120, Length=148, Percent_Identity=30.4054054054054, Blast_Score=94, Evalue=4e-21, Organism=Escherichia coli, GI87082217, Length=147, Percent_Identity=28.5714285714286, Blast_Score=79, Evalue=1e-16, Organism=Escherichia coli, GI1789527, Length=150, Percent_Identity=32.6666666666667, Blast_Score=72, Evalue=2e-14,
Paralogues:
None
Copy number: 220 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2880 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 260 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004720 - InterPro: IPR018455 [H]
Pfam domain/function: PF03830 PTSIIB_sorb [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 18030; Mature: 17899
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: PS51101 PTS_EIIB_TYPE_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVVLARVDQRLVHGIVVNQWAAEVQPKRYMVIDDAVSQDEDVKASMRLSKPAGTGMSII CEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHEEECCCCCCCCEEE DTEKALTNFKAGKYDAQRAFVIAKEPSTMLKLLDAGIEIPRVDIGIIFAEDGRTQISKFV EHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHHHCCCCCCEEEEEEEEECCCHHHHHHHH SVNQQEVADFKELEKRGVPVNIRYVPADSPEPFDKAIAGKDIK CCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHCCCCCCC >Mature Secondary Structure TVVLARVDQRLVHGIVVNQWAAEVQPKRYMVIDDAVSQDEDVKASMRLSKPAGTGMSII EEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHEEECCCCCCCCEEE DTEKALTNFKAGKYDAQRAFVIAKEPSTMLKLLDAGIEIPRVDIGIIFAEDGRTQISKFV EHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHHHCCCCCCEEEEEEEEECCCHHHHHHHH SVNQQEVADFKELEKRGVPVNIRYVPADSPEPFDKAIAGKDIK CCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2117666; 9141695; 9384377; 9551099 [H]