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The map label for this gene is 116493958

Identifier: 116493958

GI number: 116493958

Start: 396351

End: 396854

Strand: Direct

Name: 116493958

Synonym: LSEI_0394

Alternate gene names: NA

Gene position: 396351-396854 (Clockwise)

Preceding gene: 116493957

Following gene: 116493959

Centisome position: 13.69

GC content: 51.19

Gene sequence:

>504_bases
ATGGCATCTACTACTTTTCAACATCTCGATGCAGCTAAACAACAACGGGTCTTAGCTGCACTCATCACAGAATTTTCTCA
ATATCCGTTAGCGCAGGCGCAAGTGGCACGTATCGTGAAGCAGGCTGACATTGCTCGCGGTGCTTTTTATAAGTACTTCA
CGGATCTAGATGACGCCTATCGCTATGCCTTTGGACAGGTGATTGGGCGGTTGCATGCGGGTATCACGGGTCCGACCATG
CGGCAAGATCCATATACGGCAACAGCTGATTTTCTGCATGAGGCTAGTGAGAGTCGTGACCGGGATTTCATCCGCTTGCA
TTTCACTAAAAATAGCGGGCTGGTGAATGTGGCCCGGCCACAAGTTCCCGCAGATGCAACCGACTGGGCTGTCGCGTCGT
TATGCCACAGTGCGATTTCTGAGGTACTGGCTGATCCGGCTGACGCGACCTTGATTTTGGCACATTTGAAGGCAGCACTT
TCTCAGCTGCAAGTTAAGGAGTGA

Upstream 100 bases:

>100_bases
TTCACAAAAAGATTGTGCAAAATATGTTGACACGGTGTCACTTTCCGTATAAACTACGAATTATCAATTAGTGACACCGT
GTCACCACAGGGGGGCAATC

Downstream 100 bases:

>100_bases
AACAATGTATCTTTCATTAAAAGAAATCTGGCATGAAAAATTACGCTATGGCTTGATCATCGGTATGATTTTGCTGGTGA
CTTACCTTGTCTTTATTCTC

Product: transcriptional regulator

Products: NA

Alternate protein names: TetR Family Transcriptional Regulator

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MASTTFQHLDAAKQQRVLAALITEFSQYPLAQAQVARIVKQADIARGAFYKYFTDLDDAYRYAFGQVIGRLHAGITGPTM
RQDPYTATADFLHEASESRDRDFIRLHFTKNSGLVNVARPQVPADATDWAVASLCHSAISEVLADPADATLILAHLKAAL
SQLQVKE

Sequences:

>Translated_167_residues
MASTTFQHLDAAKQQRVLAALITEFSQYPLAQAQVARIVKQADIARGAFYKYFTDLDDAYRYAFGQVIGRLHAGITGPTM
RQDPYTATADFLHEASESRDRDFIRLHFTKNSGLVNVARPQVPADATDWAVASLCHSAISEVLADPADATLILAHLKAAL
SQLQVKE
>Mature_166_residues
ASTTFQHLDAAKQQRVLAALITEFSQYPLAQAQVARIVKQADIARGAFYKYFTDLDDAYRYAFGQVIGRLHAGITGPTMR
QDPYTATADFLHEASESRDRDFIRLHFTKNSGLVNVARPQVPADATDWAVASLCHSAISEVLADPADATLILAHLKAALS
QLQVKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18377; Mature: 18246

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASTTFQHLDAAKQQRVLAALITEFSQYPLAQAQVARIVKQADIARGAFYKYFTDLDDAY
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYAFGQVIGRLHAGITGPTMRQDPYTATADFLHEASESRDRDFIRLHFTKNSGLVNVARP
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEECCC
QVPADATDWAVASLCHSAISEVLADPADATLILAHLKAALSQLQVKE
CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ASTTFQHLDAAKQQRVLAALITEFSQYPLAQAQVARIVKQADIARGAFYKYFTDLDDAY
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYAFGQVIGRLHAGITGPTMRQDPYTATADFLHEASESRDRDFIRLHFTKNSGLVNVARP
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEECCC
QVPADATDWAVASLCHSAISEVLADPADATLILAHLKAALSQLQVKE
CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA