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The map label for this gene is 116493957

Identifier: 116493957

GI number: 116493957

Start: 395375

End: 396139

Strand: Direct

Name: 116493957

Synonym: LSEI_0393

Alternate gene names: NA

Gene position: 395375-396139 (Clockwise)

Preceding gene: 116493956

Following gene: 116493958

Centisome position: 13.66

GC content: 53.86

Gene sequence:

>765_bases
ATGGCGATATTAATGGCAGATGTGAGTAGTTGGCAGCCGGAATCGGACAGCTGGTTTCGCAAGCTAGCGGATGTTGGGGT
GAAGGCGGTGGTGGTAAAGCTGACGGAAGGCACCACCTACCGCAATCCTAAGGCCGCAGCGCAATTGGCGGCAGGTCGGC
GAATGGGGATGCAGGTGCATGGTTATCATTACGCGCATTATCACAACAGCGCTGATGCCGTGGCGGAAGGACGGTTCTTC
GGAACCACAGCCAAGGCTTTAGGTTTGTCAACCGAGTCGGTAATGGCAGCAGATGTGGAGGATCCGGGTTTATCTGGTGA
GTTGACGGGGTTGACGAATGTTTTTCTCCAAACGGTCAAAGCGATCGGATATCCGCACACGGATCTGTATACCATGGCCA
GTTGGCTGACCACGCGGCGCTTTGATCGGGTCGCCTTGATCCCGAAAAACCTGTGGCTTGCCAGTTATGGTGTGAATCAA
CCGGGCGTCGATAATGTTGGCACATGGCAGTTCACGAATAACTTTCAAGGGCTAGGTGTTGATATGAGTTACGACTTTTT
TGGCCACTATACAACGCGTCTCACTGGCACACTCAACGATGGTGTCGCGCGCGTGCCAACGATTCGGTTTCATACCGTGC
AACCAGGGGAGAGCTGGTGGGCGATTGCGCACCAGTACGGACATGACATGGACAAGCTGGCTGCATTGAATGGCAAGACG
ATTTTGAGTGTGATTCACCCTGGGGATCAGCTGCGGGTGAATTGA

Upstream 100 bases:

>100_bases
TTACTGACGCGGATTGAGCGGCGGTTGGATGTCCTGATTACGAGTATTGAGAAATTCATGACAAAGTTGGATGCCAAGGA
CAGGTTGTAGGAGGGGCGAG

Downstream 100 bases:

>100_bases
TATCCCCGTGTTCAAAGAAAGCTGTTGATTGGTCAAGAAGACCGAACAGACAGCTTTTTTTCTAGGATATCAAGTCGTTT
TAAAAGATGAAAATAGCAAA

Product: Lyzozyme M1 (1,4-beta-N-acetylmuramidase)

Products: NA

Alternate protein names: Family; N-Acetylmuramidase/Lysin; Glycosyl Hydrolase; Glycoside Hydrolase Family Protein; Endolysin; Lytic LysA; Prophage Lp1 Lysin; Prophage Lp2 Lysin; Phage-Related 1 4-Beta-N-Acetyl Muramidase; Endolysin Truncated; Prophage Lp2 Protein; Ypothetical Protein SMU.; Autolysin; Glycoside Hydrolase Family; 1 4-Beta-N-Acetylmuramidase; Gametolysin

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MAILMADVSSWQPESDSWFRKLADVGVKAVVVKLTEGTTYRNPKAAAQLAAGRRMGMQVHGYHYAHYHNSADAVAEGRFF
GTTAKALGLSTESVMAADVEDPGLSGELTGLTNVFLQTVKAIGYPHTDLYTMASWLTTRRFDRVALIPKNLWLASYGVNQ
PGVDNVGTWQFTNNFQGLGVDMSYDFFGHYTTRLTGTLNDGVARVPTIRFHTVQPGESWWAIAHQYGHDMDKLAALNGKT
ILSVIHPGDQLRVN

Sequences:

>Translated_254_residues
MAILMADVSSWQPESDSWFRKLADVGVKAVVVKLTEGTTYRNPKAAAQLAAGRRMGMQVHGYHYAHYHNSADAVAEGRFF
GTTAKALGLSTESVMAADVEDPGLSGELTGLTNVFLQTVKAIGYPHTDLYTMASWLTTRRFDRVALIPKNLWLASYGVNQ
PGVDNVGTWQFTNNFQGLGVDMSYDFFGHYTTRLTGTLNDGVARVPTIRFHTVQPGESWWAIAHQYGHDMDKLAALNGKT
ILSVIHPGDQLRVN
>Mature_253_residues
AILMADVSSWQPESDSWFRKLADVGVKAVVVKLTEGTTYRNPKAAAQLAAGRRMGMQVHGYHYAHYHNSADAVAEGRFFG
TTAKALGLSTESVMAADVEDPGLSGELTGLTNVFLQTVKAIGYPHTDLYTMASWLTTRRFDRVALIPKNLWLASYGVNQP
GVDNVGTWQFTNNFQGLGVDMSYDFFGHYTTRLTGTLNDGVARVPTIRFHTVQPGESWWAIAHQYGHDMDKLAALNGKTI
LSVIHPGDQLRVN

Specific function: Unknown

COG id: COG3757

COG function: function code M; Lyzozyme M1 (1,4-beta-N-acetylmuramidase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27951; Mature: 27820

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: PS00953 GLYCOSYL_HYDROL_F25

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAILMADVSSWQPESDSWFRKLADVGVKAVVVKLTEGTTYRNPKAAAQLAAGRRMGMQVH
CEEEEECCCCCCCCCHHHHHHHHHCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCEEEE
GYHYAHYHNSADAVAEGRFFGTTAKALGLSTESVMAADVEDPGLSGELTGLTNVFLQTVK
EEEEEEECCCCCHHHCCCEECCHHHHHCCCCHHEEEECCCCCCCCCCHHHHHHHHHHHHH
AIGYPHTDLYTMASWLTTRRFDRVALIPKNLWLASYGVNQPGVDNVGTWQFTNNFQGLGV
HHCCCCHHHHHHHHHHHHHCCCEEEEEECCEEEEECCCCCCCCCCCEEEEECCCCCCCEE
DMSYDFFGHYTTRLTGTLNDGVARVPTIRFHTVQPGESWWAIAHQYGHDMDKLAALNGKT
EEEHHHHEEEEEEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCHHHHHHCCCCE
ILSVIHPGDQLRVN
EEEEECCCCEEEEC
>Mature Secondary Structure 
AILMADVSSWQPESDSWFRKLADVGVKAVVVKLTEGTTYRNPKAAAQLAAGRRMGMQVH
EEEEECCCCCCCCCHHHHHHHHHCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCEEEE
GYHYAHYHNSADAVAEGRFFGTTAKALGLSTESVMAADVEDPGLSGELTGLTNVFLQTVK
EEEEEEECCCCCHHHCCCEECCHHHHHCCCCHHEEEECCCCCCCCCCHHHHHHHHHHHHH
AIGYPHTDLYTMASWLTTRRFDRVALIPKNLWLASYGVNQPGVDNVGTWQFTNNFQGLGV
HHCCCCHHHHHHHHHHHHHCCCEEEEEECCEEEEECCCCCCCCCCCEEEEECCCCCCCEE
DMSYDFFGHYTTRLTGTLNDGVARVPTIRFHTVQPGESWWAIAHQYGHDMDKLAALNGKT
EEEHHHHEEEEEEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCHHHHHHCCCCE
ILSVIHPGDQLRVN
EEEEECCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA