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The map label for this gene is hrtB [H]

Identifier: 116493959

GI number: 116493959

Start: 396859

End: 397920

Strand: Direct

Name: hrtB [H]

Synonym: LSEI_0395

Alternate gene names: 116493959

Gene position: 396859-397920 (Clockwise)

Preceding gene: 116493958

Following gene: 116493960

Centisome position: 13.71

GC content: 48.78

Gene sequence:

>1062_bases
ATGTATCTTTCATTAAAAGAAATCTGGCATGAAAAATTACGCTATGGCTTGATCATCGGTATGATTTTGCTGGTGACTTA
CCTTGTCTTTATTCTCAGTGCGTTGGCTAATGGGCTTGCCCAGCAGAATACGCAAGCAATCGAGTCCTGGGACACATCGA
AGGTGGTGTTGGCAAAGGACTCGGATATCAATTTGAGCCAGTCGCTGCTGACGTCGGAGCAGACAAAAGCGATTAAGCTA
GGCAAGTCGCAAGCCTATGTCGGTACAATCGGCGCGGTTGCGACCAGCAGCAAGCACTCGGAAATTCGTTCGACGATGGT
CGGGCTTGATTGGAATCAGTACATCGGCAAGGACATGCAGCTGGTGAGCGGTCATCGCGTGCAAAGTGACAATCAAATTG
TCGTGGATACACAATTTGAAAATGAAGGCTACAAGCTTGGCGACAAGGTGCGGCTAACCACAAACGGCCAGCAATATACC
ATCGTCGGTTTCACGGAAAATGCCAAAATGAGTGTCGCCCCGGTTGTCTACGGCACCATGGCGACATGGCGAAAACTGCA
CAACTTGCCGGATACTTTTACGGCTAGCGGCATTATTTCCAAGTCGGCTGATTTTAAAGTTAACAACAGCGATTTGAAAA
CCTATACAGCGAATACATTTATCCAGAAGCTGCCGGGTTATTCAGCCCAAAATAGCACGTTTGCGTTCATGATTGGTTTT
CTATTTGTGATTTCGCTGATTGTCATCGCGGTCTTCCTGTACATTTTGACCATGCAGAAGATTCCTAACTACGCCGTTTT
ACGGGCACAAGGTGTACCGGCGCGGACCCTCGTTAAAACGACCATTGCGCAAGCACTCATGCTTGTGTCATTCGGTCTGA
TCCTCGGTGGGGTGCTGACGGCAGTTACAGCGCGGTTCATGCCTCTGGGTGTGCCGATGATTTTCTCCGCCGGTTTAAGC
ATCGCGGTTGTTATTGGTATTTTGCTCACCGGCTTACTCGGTGCAATTGTCCCAGTCCGGACGATTCTTAAAGTTGATCC
TGTCACAGCCATTGGAGGTTGA

Upstream 100 bases:

>100_bases
AGTGCGATTTCTGAGGTACTGGCTGATCCGGCTGACGCGACCTTGATTTTGGCACATTTGAAGGCAGCACTTTCTCAGCT
GCAAGTTAAGGAGTGAAACA

Downstream 100 bases:

>100_bases
TTGTATGTCAGCTATCGAATTACAACACATCATTAAAAATTTTAAAACGCCAACCAGCGATGTCGAAGTCCTCAAAGACG
TTAGCTTCAGTGCCGAACCC

Product: peptide ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MYLSLKEIWHEKLRYGLIIGMILLVTYLVFILSALANGLAQQNTQAIESWDTSKVVLAKDSDINLSQSLLTSEQTKAIKL
GKSQAYVGTIGAVATSSKHSEIRSTMVGLDWNQYIGKDMQLVSGHRVQSDNQIVVDTQFENEGYKLGDKVRLTTNGQQYT
IVGFTENAKMSVAPVVYGTMATWRKLHNLPDTFTASGIISKSADFKVNNSDLKTYTANTFIQKLPGYSAQNSTFAFMIGF
LFVISLIVIAVFLYILTMQKIPNYAVLRAQGVPARTLVKTTIAQALMLVSFGLILGGVLTAVTARFMPLGVPMIFSAGLS
IAVVIGILLTGLLGAIVPVRTILKVDPVTAIGG

Sequences:

>Translated_353_residues
MYLSLKEIWHEKLRYGLIIGMILLVTYLVFILSALANGLAQQNTQAIESWDTSKVVLAKDSDINLSQSLLTSEQTKAIKL
GKSQAYVGTIGAVATSSKHSEIRSTMVGLDWNQYIGKDMQLVSGHRVQSDNQIVVDTQFENEGYKLGDKVRLTTNGQQYT
IVGFTENAKMSVAPVVYGTMATWRKLHNLPDTFTASGIISKSADFKVNNSDLKTYTANTFIQKLPGYSAQNSTFAFMIGF
LFVISLIVIAVFLYILTMQKIPNYAVLRAQGVPARTLVKTTIAQALMLVSFGLILGGVLTAVTARFMPLGVPMIFSAGLS
IAVVIGILLTGLLGAIVPVRTILKVDPVTAIGG
>Mature_353_residues
MYLSLKEIWHEKLRYGLIIGMILLVTYLVFILSALANGLAQQNTQAIESWDTSKVVLAKDSDINLSQSLLTSEQTKAIKL
GKSQAYVGTIGAVATSSKHSEIRSTMVGLDWNQYIGKDMQLVSGHRVQSDNQIVVDTQFENEGYKLGDKVRLTTNGQQYT
IVGFTENAKMSVAPVVYGTMATWRKLHNLPDTFTASGIISKSADFKVNNSDLKTYTANTFIQKLPGYSAQNSTFAFMIGF
LFVISLIVIAVFLYILTMQKIPNYAVLRAQGVPARTLVKTTIAQALMLVSFGLILGGVLTAVTARFMPLGVPMIFSAGLS
IAVVIGILLTGLLGAIVPVRTILKVDPVTAIGG

Specific function: Part of the ABC transporter complex hrt involved in hemin import. Responsible for the translocation of the substrate across the membrane [H]

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family. HrtB subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 38309; Mature: 38309

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLSLKEIWHEKLRYGLIIGMILLVTYLVFILSALANGLAQQNTQAIESWDTSKVVLAKD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
SDINLSQSLLTSEQTKAIKLGKSQAYVGTIGAVATSSKHSEIRSTMVGLDWNQYIGKDMQ
CCCCHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHCCCHHHHHHHHHHCCCHHHHHCCCHH
LVSGHRVQSDNQIVVDTQFENEGYKLGDKVRLTTNGQQYTIVGFTENAKMSVAPVVYGTM
HHCCCEECCCCEEEEEEEECCCCCCCCCEEEEEECCCEEEEEEEECCCCEEEHHHHHHHH
ATWRKLHNLPDTFTASGIISKSADFKVNNSDLKTYTANTFIQKLPGYSAQNSTFAFMIGF
HHHHHHHCCCCCHHHCCHHCCCCCCEECCCCCCEEHHHHHHHHCCCCCCCCCHHHHHHHH
LFVISLIVIAVFLYILTMQKIPNYAVLRAQGVPARTLVKTTIAQALMLVSFGLILGGVLT
HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVTARFMPLGVPMIFSAGLSIAVVIGILLTGLLGAIVPVRTILKVDPVTAIGG
HHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MYLSLKEIWHEKLRYGLIIGMILLVTYLVFILSALANGLAQQNTQAIESWDTSKVVLAKD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
SDINLSQSLLTSEQTKAIKLGKSQAYVGTIGAVATSSKHSEIRSTMVGLDWNQYIGKDMQ
CCCCHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHCCCHHHHHHHHHHCCCHHHHHCCCHH
LVSGHRVQSDNQIVVDTQFENEGYKLGDKVRLTTNGQQYTIVGFTENAKMSVAPVVYGTM
HHCCCEECCCCEEEEEEEECCCCCCCCCEEEEEECCCEEEEEEEECCCCEEEHHHHHHHH
ATWRKLHNLPDTFTASGIISKSADFKVNNSDLKTYTANTFIQKLPGYSAQNSTFAFMIGF
HHHHHHHCCCCCHHHCCHHCCCCCCEECCCCCCEEHHHHHHHHCCCCCCCCCHHHHHHHH
LFVISLIVIAVFLYILTMQKIPNYAVLRAQGVPARTLVKTTIAQALMLVSFGLILGGVLT
HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVTARFMPLGVPMIFSAGLSIAVVIGILLTGLLGAIVPVRTILKVDPVTAIGG
HHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA