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The map label for this gene is yhfS [H]

Identifier: 116493947

GI number: 116493947

Start: 380514

End: 381611

Strand: Direct

Name: yhfS [H]

Synonym: LSEI_0381

Alternate gene names: 116493947

Gene position: 380514-381611 (Clockwise)

Preceding gene: 116493946

Following gene: 116493948

Centisome position: 13.14

GC content: 43.53

Gene sequence:

>1098_bases
ATGCCTAGTTTTAAAACTTATCCATTAGAAAGCATCGGATATGACGAAGCGCTGCGGAAGCAATTTCGTTTAGTTGATGA
GATTACTCGCCATTTTAAGGGGTCTGAGTTTCTCAGTCGTGGTGATTTAGGCGTTGTGCCGGGGCTTAATCGACCGCGCT
ATACCAAAAGAGTAGAGGAAATTCTTGCCGCATATTTTCACGCTGAAGCTGCCATGTTAGTTCGAGGTGCAGGAACAGCG
GCAATTCGGATGGCTTTGCACAGTTATCTGACGGCTGGTCAGACTTTACTCGTTCACGATGCACCCATTTATCCGACCAC
ACAAACATCAATTGAGATGATGTCATTACGAACGATTCGAGCTGACTTTAATGATCTGAATCATCAACAATTGCCTGAGT
CGCCGGACGGTATTCTTGTTCAATATACGCGACAAAAGCCAGATGATTCATATGATATGGCAAAGGTTCTGGCATTCTTT
AAGCAAAGATATCCGTCAGTTCCGATTGTGACGGATGATAATTATGCTGTCATGAAAGTTCACAAGATTGGCGTTGAACT
TGGCGCTAGTCTAAGTTGTTTTTCAACATTTAAATTGCTAGGGCCGGAAGGTATTGGTTGTATTGTTGGTGACAAATCTG
CCATCCAAAAATTGCGATCCGCGAACTATTCAGGCGGCTCACAAGTACAAGGACACGAAGCAATCGATGTTTTACGTGGA
CTGACTTATGCACCGGTTGCATTGGCTGCTCAAGCGAATGTTGTCACTGAATTAGTTGAGCGATTGAATGGGAACGAGAT
TCCTGGCATTTCCGAGGCGTATGTGGCAAATGCTCAGTCAAAAGTTTTGTTGGTTGAATTTAACCAACCGATTGCGGAAA
AAGTTTTGAAATATACAAATGACCTTGGTGCAGCACCAAATCCTGTGGGTGCCGAGTCGAAGTATGAGATTGCGCCAATG
TTCTACCGTGTATCAGGTACCTTTAAAAAGTTTGATCCAAATCTATTAAAAACAACGATTCGAATAAATCCATATCGTTG
CGGTGCTGACACCATCATGAGGATCTTAGCGGAAAGTGTCGAGAAGGTGATGGCGTAA

Upstream 100 bases:

>100_bases
CTTGATTCATTTATTCCTCAGCTGCAGGATGCGGGCATTTCTGAGACTTTCATCAACAAAATGATAGAAGCAAATCCTCA
AAGAATCTACGGTGATATCA

Downstream 100 bases:

>100_bases
TGTTCTTAAAACAATTGGAAAAACTAAATCCAGAATTAATTCAATATGCCTTTGAATTGCATCATTCGGGGAAAATTTTA
CCGGATACGTATGTGATTGA

Product: cystathionine beta-lyase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 364

Protein sequence:

>365_residues
MPSFKTYPLESIGYDEALRKQFRLVDEITRHFKGSEFLSRGDLGVVPGLNRPRYTKRVEEILAAYFHAEAAMLVRGAGTA
AIRMALHSYLTAGQTLLVHDAPIYPTTQTSIEMMSLRTIRADFNDLNHQQLPESPDGILVQYTRQKPDDSYDMAKVLAFF
KQRYPSVPIVTDDNYAVMKVHKIGVELGASLSCFSTFKLLGPEGIGCIVGDKSAIQKLRSANYSGGSQVQGHEAIDVLRG
LTYAPVALAAQANVVTELVERLNGNEIPGISEAYVANAQSKVLLVEFNQPIAEKVLKYTNDLGAAPNPVGAESKYEIAPM
FYRVSGTFKKFDPNLLKTTIRINPYRCGADTIMRILAESVEKVMA

Sequences:

>Translated_365_residues
MPSFKTYPLESIGYDEALRKQFRLVDEITRHFKGSEFLSRGDLGVVPGLNRPRYTKRVEEILAAYFHAEAAMLVRGAGTA
AIRMALHSYLTAGQTLLVHDAPIYPTTQTSIEMMSLRTIRADFNDLNHQQLPESPDGILVQYTRQKPDDSYDMAKVLAFF
KQRYPSVPIVTDDNYAVMKVHKIGVELGASLSCFSTFKLLGPEGIGCIVGDKSAIQKLRSANYSGGSQVQGHEAIDVLRG
LTYAPVALAAQANVVTELVERLNGNEIPGISEAYVANAQSKVLLVEFNQPIAEKVLKYTNDLGAAPNPVGAESKYEIAPM
FYRVSGTFKKFDPNLLKTTIRINPYRCGADTIMRILAESVEKVMA
>Mature_364_residues
PSFKTYPLESIGYDEALRKQFRLVDEITRHFKGSEFLSRGDLGVVPGLNRPRYTKRVEEILAAYFHAEAAMLVRGAGTAA
IRMALHSYLTAGQTLLVHDAPIYPTTQTSIEMMSLRTIRADFNDLNHQQLPESPDGILVQYTRQKPDDSYDMAKVLAFFK
QRYPSVPIVTDDNYAVMKVHKIGVELGASLSCFSTFKLLGPEGIGCIVGDKSAIQKLRSANYSGGSQVQGHEAIDVLRGL
TYAPVALAAQANVVTELVERLNGNEIPGISEAYVANAQSKVLLVEFNQPIAEKVLKYTNDLGAAPNPVGAESKYEIAPMF
YRVSGTFKKFDPNLLKTTIRINPYRCGADTIMRILAESVEKVMA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789777, Length=363, Percent_Identity=57.3002754820937, Blast_Score=401, Evalue=1e-113,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR015424
- InterPro:   IPR015421 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: NA

Molecular weight: Translated: 40288; Mature: 40157

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSFKTYPLESIGYDEALRKQFRLVDEITRHFKGSEFLSRGDLGVVPGLNRPRYTKRVEE
CCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCHHHHHHHH
ILAAYFHAEAAMLVRGAGTAAIRMALHSYLTAGQTLLVHDAPIYPTTQTSIEMMSLRTIR
HHHHHHHHHHHHEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHH
ADFNDLNHQQLPESPDGILVQYTRQKPDDSYDMAKVLAFFKQRYPSVPIVTDDNYAVMKV
HHHHHCCHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEECCCEEEEEE
HKIGVELGASLSCFSTFKLLGPEGIGCIVGDKSAIQKLRSANYSGGSQVQGHEAIDVLRG
EEHHHHHCCCHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCCCCCCCCCHHHHHHHHC
LTYAPVALAAQANVVTELVERLNGNEIPGISEAYVANAQSKVLLVEFNQPIAEKVLKYTN
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCEEEEECCCHHHHHHHHHHH
DLGAAPNPVGAESKYEIAPMFYRVSGTFKKFDPNLLKTTIRINPYRCGADTIMRILAESV
HCCCCCCCCCCCCCEEECEEEEEECCCHHHCCCCCEEEEEEECCEECCHHHHHHHHHHHH
EKVMA
HHHHC
>Mature Secondary Structure 
PSFKTYPLESIGYDEALRKQFRLVDEITRHFKGSEFLSRGDLGVVPGLNRPRYTKRVEE
CCCCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCHHHHHHHH
ILAAYFHAEAAMLVRGAGTAAIRMALHSYLTAGQTLLVHDAPIYPTTQTSIEMMSLRTIR
HHHHHHHHHHHHEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHH
ADFNDLNHQQLPESPDGILVQYTRQKPDDSYDMAKVLAFFKQRYPSVPIVTDDNYAVMKV
HHHHHCCHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEECCCEEEEEE
HKIGVELGASLSCFSTFKLLGPEGIGCIVGDKSAIQKLRSANYSGGSQVQGHEAIDVLRG
EEHHHHHCCCHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCCCCCCCCCHHHHHHHHC
LTYAPVALAAQANVVTELVERLNGNEIPGISEAYVANAQSKVLLVEFNQPIAEKVLKYTN
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCEEEEECCCHHHHHHHHHHH
DLGAAPNPVGAESKYEIAPMFYRVSGTFKKFDPNLLKTTIRINPYRCGADTIMRILAESV
HCCCCCCCCCCCCCEEECEEEEEECCCHHHCCCCCEEEEEEECCEECCHHHHHHHHHHHH
EKVMA
HHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]