| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is php [H]
Identifier: 116493946
GI number: 116493946
Start: 379637
End: 380521
Strand: Direct
Name: php [H]
Synonym: LSEI_0380
Alternate gene names: 116493946
Gene position: 379637-380521 (Clockwise)
Preceding gene: 116493945
Following gene: 116493947
Centisome position: 13.11
GC content: 40.45
Gene sequence:
>885_bases ATGTTATTACCAGGTAAGGTTTATGCTCATGAACACATTCCAATTGATTTATCTGAAGTCAAGCAAAACGAGGATTGTCA TCTTGATGCCATTGATCAAGTGATTGCAGAATTTAAGGATCTTTATCAAAAAGGTGTTCGTAATGTTATTAGCATGACGA ACAAAGGTATGGGTCGAAATATTCCATATGCTAATAAAGTAGCAAAAGAATCTGGCATCAACATTGTGCAATGCACTGGG TTCTATCAAGACGCCTTTTTACCAATTGAAGTCTTTCGGTTGTCTGTTAGTCAGTTAGCTGAACAGATGATTAAAGATAT TCAAGTCGGTATTAAAGGAACAGATATTAAGGCTGGTGTAATTGGCGAAATTGCAACATCGAAAGGTCAGTGGACGGCGG CTGAAGAAAAAGTTTTCCAGGCAGCGGTCATTGCTCAGCAGGAAACTGGGTGTCCGATTAGTACCCATACCTCAATTGGA ACGTTGGGTCATGAACAGGTGGATTTCTTTAAACGGCAGCATGCCGATCTTAAACACATTGTTATCGGACATGTTGATCT GACAGGCAGTGCCGACTACGTCTTAGACATGTTGAAAACTGGTATTAATGTGGAGTTTGACACAATTGGCAAAAATAATT ATATGCCTGATGCAACGCGCGTTGAGATGTTAAAAGCGATTGAAGCCGCCGGTTTTACGGATCAAGTCGTTTTGTCCATG GACATTACGCGTAAGTCACATCTGAAGGCTAATGGCGGGAATGGTTATGCTTATTTACTTGATTCATTTATTCCTCAGCT GCAGGATGCGGGCATTTCTGAGACTTTCATCAACAAAATGATAGAAGCAAATCCTCAAAGAATCTACGGTGATATCAATG CCTAG
Upstream 100 bases:
>100_bases AGTGGGACCAATTGCTGCTATCGCGCTTGGAATTTTGCTGAATCTGTTACGAATCGTACATCTGTTTTAGTCGATGGCGA GCGCATTAAGGGGAGAAAAC
Downstream 100 bases:
>100_bases TTTTAAAACTTATCCATTAGAAAGCATCGGATATGACGAAGCGCTGCGGAAGCAATTTCGTTTAGTTGATGAGATTACTC GCCATTTTAAGGGGTCTGAG
Product: metal-dependent hydrolase with the TIM-barrel fold
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MLLPGKVYAHEHIPIDLSEVKQNEDCHLDAIDQVIAEFKDLYQKGVRNVISMTNKGMGRNIPYANKVAKESGINIVQCTG FYQDAFLPIEVFRLSVSQLAEQMIKDIQVGIKGTDIKAGVIGEIATSKGQWTAAEEKVFQAAVIAQQETGCPISTHTSIG TLGHEQVDFFKRQHADLKHIVIGHVDLTGSADYVLDMLKTGINVEFDTIGKNNYMPDATRVEMLKAIEAAGFTDQVVLSM DITRKSHLKANGGNGYAYLLDSFIPQLQDAGISETFINKMIEANPQRIYGDINA
Sequences:
>Translated_294_residues MLLPGKVYAHEHIPIDLSEVKQNEDCHLDAIDQVIAEFKDLYQKGVRNVISMTNKGMGRNIPYANKVAKESGINIVQCTG FYQDAFLPIEVFRLSVSQLAEQMIKDIQVGIKGTDIKAGVIGEIATSKGQWTAAEEKVFQAAVIAQQETGCPISTHTSIG TLGHEQVDFFKRQHADLKHIVIGHVDLTGSADYVLDMLKTGINVEFDTIGKNNYMPDATRVEMLKAIEAAGFTDQVVLSM DITRKSHLKANGGNGYAYLLDSFIPQLQDAGISETFINKMIEANPQRIYGDINA >Mature_294_residues MLLPGKVYAHEHIPIDLSEVKQNEDCHLDAIDQVIAEFKDLYQKGVRNVISMTNKGMGRNIPYANKVAKESGINIVQCTG FYQDAFLPIEVFRLSVSQLAEQMIKDIQVGIKGTDIKAGVIGEIATSKGQWTAAEEKVFQAAVIAQQETGCPISTHTSIG TLGHEQVDFFKRQHADLKHIVIGHVDLTGSADYVLDMLKTGINVEFDTIGKNNYMPDATRVEMLKAIEAAGFTDQVVLSM DITRKSHLKANGGNGYAYLLDSFIPQLQDAGISETFINKMIEANPQRIYGDINA
Specific function: Its real enzymatic activity is not yet known. It was tested for general esterase, aminopeptidase, sulfatase, phosphatase, carbonic anhydrase, phosphodiesterase, and phosphotriesterase activities with the following substrates:P- nitrophenyl acetate, L-alan
COG id: COG1735
COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphotriesterase family [H]
Homologues:
Organism=Homo sapiens, GI20070186, Length=273, Percent_Identity=30.03663003663, Blast_Score=124, Evalue=1e-28, Organism=Homo sapiens, GI47933341, Length=273, Percent_Identity=30.03663003663, Blast_Score=124, Evalue=1e-28, Organism=Escherichia coli, GI1789780, Length=285, Percent_Identity=50.8771929824561, Blast_Score=303, Evalue=1e-83, Organism=Drosophila melanogaster, GI24645325, Length=262, Percent_Identity=25.9541984732824, Blast_Score=91, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017947 - InterPro: IPR001559 [H]
Pfam domain/function: PF02126 PTE [H]
EC number: NA
Molecular weight: Translated: 32373; Mature: 32373
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLPGKVYAHEHIPIDLSEVKQNEDCHLDAIDQVIAEFKDLYQKGVRNVISMTNKGMGRN CCCCCCEEECCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC IPYANKVAKESGINIVQCTGFYQDAFLPIEVFRLSVSQLAEQMIKDIQVGIKGTDIKAGV CCCHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH IGEIATSKGQWTAAEEKVFQAAVIAQQETGCPISTHTSIGTLGHEQVDFFKRQHADLKHI HHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEE VIGHVDLTGSADYVLDMLKTGINVEFDTIGKNNYMPDATRVEMLKAIEAAGFTDQVVLSM EEEEEECCCCHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEE DITRKSHLKANGGNGYAYLLDSFIPQLQDAGISETFINKMIEANPQRIYGDINA ECCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHEEECCCC >Mature Secondary Structure MLLPGKVYAHEHIPIDLSEVKQNEDCHLDAIDQVIAEFKDLYQKGVRNVISMTNKGMGRN CCCCCCEEECCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC IPYANKVAKESGINIVQCTGFYQDAFLPIEVFRLSVSQLAEQMIKDIQVGIKGTDIKAGV CCCHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH IGEIATSKGQWTAAEEKVFQAAVIAQQETGCPISTHTSIGTLGHEQVDFFKRQHADLKHI HHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEE VIGHVDLTGSADYVLDMLKTGINVEFDTIGKNNYMPDATRVEMLKAIEAAGFTDQVVLSM EEEEEECCCCHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEE DITRKSHLKANGGNGYAYLLDSFIPQLQDAGISETFINKMIEANPQRIYGDINA ECCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503; 9548740 [H]