Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116493787

Identifier: 116493787

GI number: 116493787

Start: 210390

End: 211211

Strand: Direct

Name: 116493787

Synonym: LSEI_0216

Alternate gene names: NA

Gene position: 210390-211211 (Clockwise)

Preceding gene: 116493786

Following gene: 116493788

Centisome position: 7.27

GC content: 47.81

Gene sequence:

>822_bases
ATGGCAGAGAAACATGAAGCAGAGACGAAACAGACGGCAACCGATGCTGCAGTAAATGGTAAAAATACTGCTACGACTGA
ACAAACAGCATCAAAAGTACAGTCGACAGCCACTGATGAGTCGTCAGCAGATCAAGCAACGGCGGCTAAAAATGCACATG
TGAAACAGGAAAAGCCTGCGACCACTGTGCCAGAGCTGATTGCACGGCTCACTAATAAAAATGATGAATATATTTTCAAA
CTACGCCGTGAGTTAAAAGACGGCGGTATGAACGCGGCGGACGAAGAAGAACTACTCAAAACGATGTTGCCCGAGATCAT
CACAGCACAACGACAAGGCAAGCCAGCCAATCAGCTTTACGGACCGGTCACGGTAAAGGCAGACGAAATTCTGCATACGC
CAAAACCTGAGCCTAAAAAGCCAATGTGGTTGATGGTCATTGACCAAAGTCTGTTCTTCATGTCGATTTTAGCGGTTATG
TATGGGGCACTTGCCTACTTCGATACCAAGTCGCAAAACGCCGCCAGCAGCAGTTTTGTTTACTTAGTGATGTTGAGTCT
AATGGCTGGTCTCTTCTTCGTTTATTATGCTGACTGGATGCAGCAAGATAAAAAGAAGCGCCGCAGTGCTTGGCTTGTCT
TGGGCGGCGGTGTTGTCTTAGTCGTGTCGATCACGTTCATTGGCAGTGCCTTGGCGATGCTTGACACGCCGTTCACGCGC
CCAATGCCGTGGTTCGTCAATATCATTATTGGCGCCATTGCCTATGGGATTCACTGGGTCTTACAGCACCGGTATCACCT
CAAAAGCTTTTTCCAGAGATAA

Upstream 100 bases:

>100_bases
TATCGATCCGAAGGCAAAGAATATGAAGTGCAGGATGGGGACATCATTGAATTCCGGTTCAATGTCTAACGCATAACGAC
TTAGGAGATAGGAGTTTCCA

Downstream 100 bases:

>100_bases
GCTGATAGTCAGATTTCAACATCGGGTATCTACTTTTTAAAAAATCCAACAGTCGCCGAAAATGGCGGCTTTTTTTGTAT
TGCCAGTGAGGGAAAACGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MAEKHEAETKQTATDAAVNGKNTATTEQTASKVQSTATDESSADQATAAKNAHVKQEKPATTVPELIARLTNKNDEYIFK
LRRELKDGGMNAADEEELLKTMLPEIITAQRQGKPANQLYGPVTVKADEILHTPKPEPKKPMWLMVIDQSLFFMSILAVM
YGALAYFDTKSQNAASSSFVYLVMLSLMAGLFFVYYADWMQQDKKKRRSAWLVLGGGVVLVVSITFIGSALAMLDTPFTR
PMPWFVNIIIGAIAYGIHWVLQHRYHLKSFFQR

Sequences:

>Translated_273_residues
MAEKHEAETKQTATDAAVNGKNTATTEQTASKVQSTATDESSADQATAAKNAHVKQEKPATTVPELIARLTNKNDEYIFK
LRRELKDGGMNAADEEELLKTMLPEIITAQRQGKPANQLYGPVTVKADEILHTPKPEPKKPMWLMVIDQSLFFMSILAVM
YGALAYFDTKSQNAASSSFVYLVMLSLMAGLFFVYYADWMQQDKKKRRSAWLVLGGGVVLVVSITFIGSALAMLDTPFTR
PMPWFVNIIIGAIAYGIHWVLQHRYHLKSFFQR
>Mature_272_residues
AEKHEAETKQTATDAAVNGKNTATTEQTASKVQSTATDESSADQATAAKNAHVKQEKPATTVPELIARLTNKNDEYIFKL
RRELKDGGMNAADEEELLKTMLPEIITAQRQGKPANQLYGPVTVKADEILHTPKPEPKKPMWLMVIDQSLFFMSILAVMY
GALAYFDTKSQNAASSSFVYLVMLSLMAGLFFVYYADWMQQDKKKRRSAWLVLGGGVVLVVSITFIGSALAMLDTPFTRP
MPWFVNIIIGAIAYGIHWVLQHRYHLKSFFQR

Specific function: Unknown

COG id: COG4858

COG function: function code S; Uncharacterized membrane-bound protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30513; Mature: 30381

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEKHEAETKQTATDAAVNGKNTATTEQTASKVQSTATDESSADQATAAKNAHVKQEKPA
CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCC
TTVPELIARLTNKNDEYIFKLRRELKDGGMNAADEEELLKTMLPEIITAQRQGKPANQLY
CHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCC
GPVTVKADEILHTPKPEPKKPMWLMVIDQSLFFMSILAVMYGALAYFDTKSQNAASSSFV
CCEEEEHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
YLVMLSLMAGLFFVYYADWMQQDKKKRRSAWLVLGGGVVLVVSITFIGSALAMLDTPFTR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHCCCCCC
PMPWFVNIIIGAIAYGIHWVLQHRYHLKSFFQR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AEKHEAETKQTATDAAVNGKNTATTEQTASKVQSTATDESSADQATAAKNAHVKQEKPA
CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCC
TTVPELIARLTNKNDEYIFKLRRELKDGGMNAADEEELLKTMLPEIITAQRQGKPANQLY
CHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCC
GPVTVKADEILHTPKPEPKKPMWLMVIDQSLFFMSILAVMYGALAYFDTKSQNAASSSFV
CCEEEEHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
YLVMLSLMAGLFFVYYADWMQQDKKKRRSAWLVLGGGVVLVVSITFIGSALAMLDTPFTR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHCCCCCC
PMPWFVNIIIGAIAYGIHWVLQHRYHLKSFFQR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA